RNA–Protein interactions for RNA: ENST00000420666.1

ITSN1-215, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-215ENST00000420666 HIGD2AQ9BW72 106 aa8.41□□□□□ -1.06
ITSN1-215ENST00000420666 A0A096LNJ9 63 aa8.4□□□□□ -1.06
ITSN1-215ENST00000420666 SPRR4Q96PI1 79 aa8.4□□□□□ -1.06
ITSN1-215ENST00000420666 FP248Q71RG6 208 aaPredicted RBP8.39□□□□□ -1.07
ITSN1-215ENST00000420666 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
ITSN1-215ENST00000420666 C11orf86A6NJI1 115 aa8.38□□□□□ -1.07
ITSN1-215ENST00000420666 LINC00614P0C842 121 aa8.38□□□□□ -1.07
ITSN1-215ENST00000420666 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
ITSN1-215ENST00000420666 SEC11CQ9BY50 192 aa8.38□□□□□ -1.07
ITSN1-215ENST00000420666 HBDP02042 147 aa8.37□□□□□ -1.07
ITSN1-215ENST00000420666 LINC00158P58513 81 aa8.37□□□□□ -1.07
ITSN1-215ENST00000420666 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
ITSN1-215ENST00000420666 BAGE3Q86Y29 109 aa8.37□□□□□ -1.07
ITSN1-215ENST00000420666 URB1-AS1Q96HZ7 61 aa8.37□□□□□ -1.07
ITSN1-215ENST00000420666 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
ITSN1-215ENST00000420666 LINC00337Q8N6G1 96 aa8.35□□□□□ -1.07
ITSN1-215ENST00000420666 C18orf32Q8TCD1 76 aa8.35□□□□□ -1.07
ITSN1-215ENST00000420666 PRYO14603 147 aa8.33□□□□□ -1.08
ITSN1-215ENST00000420666 PMCHL1Q16048 86 aa8.33□□□□□ -1.08
ITSN1-215ENST00000420666 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
ITSN1-215ENST00000420666 Q8NBF4 154 aa8.33□□□□□ -1.08
ITSN1-215ENST00000420666 A0A0U1RRA0 63 aa8.32□□□□□ -1.08
ITSN1-215ENST00000420666 SPRR1AP35321 89 aa8.32□□□□□ -1.08
ITSN1-215ENST00000420666 DAND5Q8N907 189 aa8.32□□□□□ -1.08
ITSN1-215ENST00000420666 SMCR5Q8TEV8 140 aa8.32□□□□□ -1.08
ITSN1-215ENST00000420666 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
ITSN1-215ENST00000420666 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
ITSN1-215ENST00000420666 TMEM223A0PJW6 202 aa8.31□□□□□ -1.08
ITSN1-215ENST00000420666 SPINK1P00995 79 aa8.31□□□□□ -1.08
ITSN1-215ENST00000420666 RHEBQ15382 184 aa8.31□□□□□ -1.08
ITSN1-215ENST00000420666 ASB16-AS1Q495Z4 193 aa8.31□□□□□ -1.08
ITSN1-215ENST00000420666 KCNQ1DNQ9H478 68 aa8.31□□□□□ -1.08
ITSN1-215ENST00000420666 RPS10P5Q9NQ39 176 aa8.31□□□□□ -1.08
ITSN1-215ENST00000420666 ATP6V1G1O75348 118 aa8.3□□□□□ -1.08
ITSN1-215ENST00000420666 C10orf91Q5T1B1 145 aa8.3□□□□□ -1.08
ITSN1-215ENST00000420666 BOD1L2Q8IYS8 172 aa8.3□□□□□ -1.08
ITSN1-215ENST00000420666 KRTAP4-16G5E9R7 235 aaPredicted RBP8.29□□□□□ -1.08
ITSN1-215ENST00000420666 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
ITSN1-215ENST00000420666 ETDCA0A1B0GVM5 59 aa8.28□□□□□ -1.08
ITSN1-215ENST00000420666 IFITM2Q01629 132 aa8.28□□□□□ -1.08
ITSN1-215ENST00000420666 LINC00483Q53H64 154 aa8.28□□□□□ -1.08
ITSN1-215ENST00000420666 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.09
ITSN1-215ENST00000420666 NCR3O14931 201 aa8.27□□□□□ -1.09
ITSN1-215ENST00000420666 MEIG1Q5JSS6 88 aa8.27□□□□□ -1.09
ITSN1-215ENST00000420666 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
ITSN1-215ENST00000420666 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
ITSN1-215ENST00000420666 LINC01547P58512 204 aaPredicted RBP8.26□□□□□ -1.09
ITSN1-215ENST00000420666 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
ITSN1-215ENST00000420666 HERV-K104P63124 156 aa8.26□□□□□ -1.09
ITSN1-215ENST00000420666 COMMD7Q86VX2 200 aa8.26□□□□□ -1.09
ITSN1-215ENST00000420666 TRBV10-3A0A0K0K1G6 114 aa8.25□□□□□ -1.09
ITSN1-215ENST00000420666 GAGE2AQ6NT46 116 aa8.25□□□□□ -1.09
ITSN1-215ENST00000420666 SSBP3-AS1Q7Z2R9 100 aa8.25□□□□□ -1.09
ITSN1-215ENST00000420666 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
ITSN1-215ENST00000420666 S100A12P80511 92 aa8.24□□□□□ -1.09
ITSN1-215ENST00000420666 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
ITSN1-215ENST00000420666 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
ITSN1-215ENST00000420666 NDUFA12Q9UI09 145 aa8.24□□□□□ -1.09
ITSN1-215ENST00000420666 B5MCH6 92 aa8.23□□□□□ -1.09
ITSN1-215ENST00000420666 MOBPQ13875 183 aa8.22□□□□□ -1.09
ITSN1-215ENST00000420666 FAM19A2Q8N3H0 131 aa8.22□□□□□ -1.09
ITSN1-215ENST00000420666 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
ITSN1-215ENST00000420666 MAP1LC3CQ9BXW4 147 aa8.22□□□□□ -1.09
ITSN1-215ENST00000420666 MYMXA0A1B0GTQ4 84 aa8.21□□□□□ -1.1
ITSN1-215ENST00000420666 ERC2-IT1O76042 136 aa8.21□□□□□ -1.1
ITSN1-215ENST00000420666 Q8N377 158 aa8.21□□□□□ -1.1
ITSN1-215ENST00000420666 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
ITSN1-215ENST00000420666 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
ITSN1-215ENST00000420666 SLC25A20O43772 301 aa8.2□□□□□ -1.1
ITSN1-215ENST00000420666 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
ITSN1-215ENST00000420666 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
ITSN1-215ENST00000420666 TRBV10-2A0A0K0K1G8 114 aa8.19□□□□□ -1.1
ITSN1-215ENST00000420666 DDTP30046 118 aa8.18□□□□□ -1.1
ITSN1-215ENST00000420666 Q9BRP9 147 aa8.18□□□□□ -1.1
ITSN1-215ENST00000420666 XP32Q5T750 250 aa8.17□□□□□ -1.1
ITSN1-215ENST00000420666 Q6ZRX8 168 aa8.16□□□□□ -1.1
ITSN1-215ENST00000420666 APOC3P02656 99 aa8.15□□□□□ -1.1
ITSN1-215ENST00000420666 LEPROTO15243 131 aa8.14□□□□□ -1.11
ITSN1-215ENST00000420666 HSBP1O75506 76 aa8.14□□□□□ -1.11
ITSN1-215ENST00000420666 SNAPINO95295 136 aa8.14□□□□□ -1.11
ITSN1-215ENST00000420666 TSPEAR-AS2P59090 65 aa8.14□□□□□ -1.11
ITSN1-215ENST00000420666 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
ITSN1-215ENST00000420666 IGLV6-57P01721 117 aa8.13□□□□□ -1.11
ITSN1-215ENST00000420666 JOSD1Q15040 202 aaPredicted RBP8.13□□□□□ -1.11
ITSN1-215ENST00000420666 SVBPQ8N300 66 aa8.13□□□□□ -1.11
ITSN1-215ENST00000420666 YPEL4Q96NS1 127 aa8.13□□□□□ -1.11
ITSN1-215ENST00000420666 NDUFC2O95298 119 aa8.12□□□□□ -1.11
ITSN1-215ENST00000420666 S100A7L2Q5SY68 101 aa8.12□□□□□ -1.11
ITSN1-215ENST00000420666 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
ITSN1-215ENST00000420666 H0Y8G0 127 aa8.11□□□□□ -1.11
ITSN1-215ENST00000420666 J3QQQ9 107 aa8.11□□□□□ -1.11
ITSN1-215ENST00000420666 NDUFA5Q16718 116 aa8.11□□□□□ -1.11
ITSN1-215ENST00000420666 C9orf153Q5TBE3 101 aa8.11□□□□□ -1.11
ITSN1-215ENST00000420666 TRAV23DV6A0A075B6W5 121 aa8.1□□□□□ -1.11
ITSN1-215ENST00000420666 NMUP48645 174 aa8.1□□□□□ -1.11
ITSN1-215ENST00000420666 C5orf52A6NGY3 159 aa8.09□□□□□ -1.11
ITSN1-215ENST00000420666 PLNP26678 52 aa8.09□□□□□ -1.11
ITSN1-215ENST00000420666 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
ITSN1-215ENST00000420666 FSIP2Q5CZC0 6907 aa8.08□□□□□ -1.12
ITSN1-215ENST00000420666 ZNF73O43830 326 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms