RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 IGKV2D-28P01615 120 aa12□□□□□ -0.49
MCF2L-212ENST00000420013 HSBP1O75506 76 aa11.99□□□□□ -0.49
MCF2L-212ENST00000420013 IFI27L1Q96BM0 104 aa11.99□□□□□ -0.49
MCF2L-212ENST00000420013 VPREB1P12018 145 aa11.98□□□□□ -0.49
MCF2L-212ENST00000420013 LINC00158P58513 81 aa11.98□□□□□ -0.49
MCF2L-212ENST00000420013 TSPAN13O95857 204 aa11.96□□□□□ -0.49
MCF2L-212ENST00000420013 TRAV12-1A0A0B4J245 112 aa11.94□□□□□ -0.5
MCF2L-212ENST00000420013 CTAG1AP78358 180 aa11.94□□□□□ -0.5
MCF2L-212ENST00000420013 KRTAP13-2Q52LG2 175 aa11.94□□□□□ -0.5
MCF2L-212ENST00000420013 TMEM126AQ9H061 195 aa11.94□□□□□ -0.5
MCF2L-212ENST00000420013 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
MCF2L-212ENST00000420013 FAM19A1Q7Z5A9 133 aa11.93□□□□□ -0.5
MCF2L-212ENST00000420013 FAM19A2Q8N3H0 131 aa11.93□□□□□ -0.5
MCF2L-212ENST00000420013 TMEM223A0PJW6 202 aa11.92□□□□□ -0.5
MCF2L-212ENST00000420013 H0Y8G0 127 aa11.92□□□□□ -0.5
MCF2L-212ENST00000420013 SERF1AO75920 110 aa11.91□□□□□ -0.5
MCF2L-212ENST00000420013 PRLHP81277 87 aa11.91□□□□□ -0.5
MCF2L-212ENST00000420013 MEIG1Q5JSS6 88 aa11.91□□□□□ -0.5
MCF2L-212ENST00000420013 LINC00304Q8N9R0 145 aa11.91□□□□□ -0.5
MCF2L-212ENST00000420013 A0A0U1RQV1 116 aa11.9□□□□□ -0.5
MCF2L-212ENST00000420013 TMEM238C9JI98 176 aa11.9□□□□□ -0.5
MCF2L-212ENST00000420013 ANAPC11Q9NYG5 84 aa11.9□□□□□ -0.5
MCF2L-212ENST00000420013 IGKV2D-26A0A0A0MRZ7 120 aa11.89□□□□□ -0.51
MCF2L-212ENST00000420013 M0R378 163 aa11.89□□□□□ -0.51
MCF2L-212ENST00000420013 LEPROTL1O95214 131 aa11.88□□□□□ -0.51
MCF2L-212ENST00000420013 LINC00310P59036 64 aa11.88□□□□□ -0.51
MCF2L-212ENST00000420013 MUC2Q02817 5179 aa11.87□□□□□ -0.51
MCF2L-212ENST00000420013 SMIM13P0DJ93 91 aa11.86□□□□□ -0.51
MCF2L-212ENST00000420013 HERV-K104P63124 156 aa11.86□□□□□ -0.51
MCF2L-212ENST00000420013 Q8NDZ9 215 aa11.86□□□□□ -0.51
MCF2L-212ENST00000420013 LINC00587B1AMM8 73 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BKO60814 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BJP06899 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BOP23527 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BBP33778 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BDP58876 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BCP62807 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST2H2BEQ16778 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BHQ93079 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BNQ99877 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 HIST1H2BMQ99879 126 aa11.85□□□□□ -0.51
MCF2L-212ENST00000420013 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
MCF2L-212ENST00000420013 MAP1LC3CQ9BXW4 147 aa11.84□□□□□ -0.51
MCF2L-212ENST00000420013 NDUFA12Q9UI09 145 aa11.84□□□□□ -0.51
MCF2L-212ENST00000420013 HSPB8Q9UJY1 196 aa11.84□□□□□ -0.51
MCF2L-212ENST00000420013 MYMXA0A1B0GTQ4 84 aa11.83□□□□□ -0.52
MCF2L-212ENST00000420013 PLEKHB2Q96CS7 222 aa11.83□□□□□ -0.52
MCF2L-212ENST00000420013 HIGD2AQ9BW72 106 aa11.83□□□□□ -0.52
MCF2L-212ENST00000420013 MIR7-3HGQ8N6C7 128 aa11.82□□□□□ -0.52
MCF2L-212ENST00000420013 FABP4P15090 132 aa11.81□□□□□ -0.52
MCF2L-212ENST00000420013 TPRXLQ17RH7 258 aa11.81□□□□□ -0.52
MCF2L-212ENST00000420013 PRYO14603 147 aa11.8□□□□□ -0.52
MCF2L-212ENST00000420013 PLNP26678 52 aa11.8□□□□□ -0.52
MCF2L-212ENST00000420013 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-212ENST00000420013 NCR3O14931 201 aa11.79□□□□□ -0.52
MCF2L-212ENST00000420013 HERVK_113P61574 105 aa11.79□□□□□ -0.52
MCF2L-212ENST00000420013 RETNLBQ9BQ08 111 aa11.79□□□□□ -0.52
MCF2L-212ENST00000420013 S100A12P80511 92 aa11.78□□□□□ -0.52
MCF2L-212ENST00000420013 SPAG11AQ6PDA7 123 aa11.77□□□□□ -0.53
MCF2L-212ENST00000420013 SPRR4Q96PI1 79 aa11.77□□□□□ -0.53
MCF2L-212ENST00000420013 LEPROTO15243 131 aa11.76□□□□□ -0.53
MCF2L-212ENST00000420013 DPM2O94777 84 aa11.76□□□□□ -0.53
MCF2L-212ENST00000420013 C3orf22Q8N5N4 141 aa11.76□□□□□ -0.53
MCF2L-212ENST00000420013 LINC00337Q8N6G1 96 aa11.76□□□□□ -0.53
MCF2L-212ENST00000420013 COA6Q5JTJ3 125 aaKnown RBP11.75□□□□□ -0.53
MCF2L-212ENST00000420013 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
MCF2L-212ENST00000420013 LGALS3P17931 250 aaKnown RBP11.74□□□□□ -0.53
MCF2L-212ENST00000420013 SPRR1AP35321 89 aa11.74□□□□□ -0.53
MCF2L-212ENST00000420013 PMCHL2Q9BQD1 86 aa11.74□□□□□ -0.53
MCF2L-212ENST00000420013 MIEN1Q9BRT3 115 aa11.74□□□□□ -0.53
MCF2L-212ENST00000420013 IGLV7-46A0A075B6I9 117 aa11.73□□□□□ -0.53
MCF2L-212ENST00000420013 J3QQQ9 107 aa11.73□□□□□ -0.53
MCF2L-212ENST00000420013 CDIP1Q9H305 208 aa11.73□□□□□ -0.53
MCF2L-212ENST00000420013 IGKCP01834 107 aa11.72□□□□□ -0.53
MCF2L-212ENST00000420013 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
MCF2L-212ENST00000420013 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
MCF2L-212ENST00000420013 DAND5Q8N907 189 aa11.71□□□□□ -0.53
MCF2L-212ENST00000420013 MUC17Q685J3 4493 aa11.7□□□□□ -0.54
MCF2L-212ENST00000420013 TRBV10-3A0A0K0K1G6 114 aa11.7□□□□□ -0.54
MCF2L-212ENST00000420013 NMUP48645 174 aa11.7□□□□□ -0.54
MCF2L-212ENST00000420013 FP248Q71RG6 208 aaPredicted RBP11.69□□□□□ -0.54
MCF2L-212ENST00000420013 KRTAP4-16G5E9R7 235 aaPredicted RBP11.68□□□□□ -0.54
MCF2L-212ENST00000420013 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
MCF2L-212ENST00000420013 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
MCF2L-212ENST00000420013 SMCR5Q8TEV8 140 aa11.66□□□□□ -0.54
MCF2L-212ENST00000420013 LOC107984156A0A0G2JMH3 177 aa11.65□□□□□ -0.54
MCF2L-212ENST00000420013 DDTP30046 118 aa11.65□□□□□ -0.54
MCF2L-212ENST00000420013 S100A7L2Q5SY68 101 aa11.65□□□□□ -0.54
MCF2L-212ENST00000420013 ARL17AQ8IVW1 177 aa11.65□□□□□ -0.54
MCF2L-212ENST00000420013 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
MCF2L-212ENST00000420013 TRBV10-2A0A0K0K1G8 114 aa11.64□□□□□ -0.55
MCF2L-212ENST00000420013 LINC00483Q53H64 154 aa11.64□□□□□ -0.55
MCF2L-212ENST00000420013 SPANXB1Q9NS25 103 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-212ENST00000420013 Q8NBF4 154 aa11.63□□□□□ -0.55
MCF2L-212ENST00000420013 PET117Q6UWS5 81 aa11.62□□□□□ -0.55
MCF2L-212ENST00000420013 SPINK1P00995 79 aa11.61□□□□□ -0.55
MCF2L-212ENST00000420013 NPC2P61916 151 aa11.6□□□□□ -0.55
MCF2L-212ENST00000420013 LINC01545Q5VT33 79 aa11.6□□□□□ -0.55
MCF2L-212ENST00000420013 FAT4Q6V0I7 4981 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms