RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MIAQ16674 131 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC01556Q5JQF7 62 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 CD164L2Q6UWJ8 174 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC01561Q8N1V8 128 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 C10orf126Q8N4M7 172 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 COPS9Q8WXC6 57 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 RAB37Q96AX2 223 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 RMI2Q96E14 147 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 ZNF625Q96I27 306 aaPredicted RBP2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 OCR1Q9BZK8 76 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 TENM1Q9UKZ4 2725 aa2.52□□□□□ -2.01
HMGB3P20-201ENST00000417997 JMJD1CQ15652 2540 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 IGKV2D-24A0A075B6R9 120 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A0U1RRA0 63 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A1B0GV90 55 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 TIMM17BO60830 172 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 SMIM13P0DJ93 91 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 FXYD2P54710 66 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 NPC2P61916 151 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 SPAG11BQ08648 103 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 Q1RN00 199 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 C6orf226Q5I0X4 101 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 Q6ZVH6 145 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 KRTAP11-1Q8IUC1 163 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 Q8IZM0 81 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 SPANXDQ9BXN6 97 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 Q9HAA7 133 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 SPANXCQ9NY87 97 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC00588Q9Y4M8 146 aa2.51□□□□□ -2.01
HMGB3P20-201ENST00000417997 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 K7ERJ3 54 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 IFITM1P13164 125 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC00158P58513 81 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 KRTAP10-8P60410 259 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 VAMP3Q15836 100 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 LYRM7Q5U5X0 104 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 ENHOQ6UWT2 76 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 UPK3BQ9BT76 320 aa2.5□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A0B4J2C4 111 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 IBA57-AS1B1ANH7 110 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 H3BUT2 72 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 K7EP13 123 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 TAX1BP3O14907 124 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 PSCAO43653 123 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 PFN2P35080 140 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 TTC32Q5I0X7 151 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 MUSTN1Q8IVN3 82 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 DAND5Q8N907 189 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 CAMK2N2Q96S95 79 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 ERG28Q9UKR5 140 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 APLNQ9ULZ1 77 aa2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 NIPBLQ6KC79 2804 aaeCLIP2.49□□□□□ -2.01
HMGB3P20-201ENST00000417997 MAST4O15021 2626 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 RPL37AP8A6NKH3 93 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 H7C2G1 150 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 FABP2P12104 132 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 RPL13AP40429 203 aaKnown RBP2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 PSMB2P49721 201 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 C2orf82Q6UX34 121 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 GTF2H5Q6ZYL4 71 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 MIR7-3HGQ8N6C7 128 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC00308Q8TCZ7 52 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 NAA38Q9BRA0 125 aaKnown RBP2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 PRO1854Q9UHT4 67 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 VWFP04275 2813 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 STAB1Q9NY15 2570 aa2.48□□□□□ -2.01
HMGB3P20-201ENST00000417997 LOC107984156A0A0G2JMH3 177 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A1B0GWB2 263 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 A0A1W2PPM0 123 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 F8WDY8 70 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 TSPAN13O95857 204 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 COX17Q14061 63 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 KIAA0087Q14695 138 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 ARL17AQ8IVW1 177 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 C6orf223Q8N319 242 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 C15orf56Q8N910 161 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 MUC7Q8TAX7 377 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 LINC00526Q96FQ7 95 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 PPDPFQ9H3Y8 114 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 SPCS1Q9Y6A9 102 aa2.47□□□□□ -2.01
HMGB3P20-201ENST00000417997 GVQW2A0A096LPI5 108 aaPredicted RBP2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 TRAV13-2A0A0B4J235 113 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 TRBV30A0A0K0K1B3 111 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 K7EP34 96 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 RTL8CO15255 209 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 COX6CP09669 75 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 SCGB1C2P0DMR2 95 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 SYCNQ0VAF6 134 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 KRTAP26-1Q6PEX3 210 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 UNQ6190/PRO20217Q6UXQ8 127 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 SOSTDC1Q6X4U4 206 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 Q6ZRU5 148 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 OR13C6PQ8NH95 151 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 CARD19Q96LW7 228 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 LINC00167Q96N53 147 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 C6orf48Q9UBA6 75 aa2.46□□□□□ -2.02
HMGB3P20-201ENST00000417997 NBDYA0A0U1RRE5 68 aa2.45□□□□□ -2.02
HMGB3P20-201ENST00000417997 NCR3O14931 201 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms