RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 HERVK_113P61574 105 aa9.27□□□□□ -0.93
NUP50-204ENST00000417702 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
NUP50-204ENST00000417702 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
NUP50-204ENST00000417702 ERG28Q9UKR5 140 aa9.27□□□□□ -0.93
NUP50-204ENST00000417702 ZNF861PO60384 105 aa9.26□□□□□ -0.93
NUP50-204ENST00000417702 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
NUP50-204ENST00000417702 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
NUP50-204ENST00000417702 GAGE10A6NGK3 116 aa9.25□□□□□ -0.93
NUP50-204ENST00000417702 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
NUP50-204ENST00000417702 COX17Q14061 63 aa9.25□□□□□ -0.93
NUP50-204ENST00000417702 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
NUP50-204ENST00000417702 ZNF625Q96I27 306 aaPredicted RBP9.25□□□□□ -0.93
NUP50-204ENST00000417702 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
NUP50-204ENST00000417702 LEPROTO15243 131 aa9.24□□□□□ -0.93
NUP50-204ENST00000417702 BCE1O60756 84 aa9.24□□□□□ -0.93
NUP50-204ENST00000417702 S100A6P06703 90 aa9.24□□□□□ -0.93
NUP50-204ENST00000417702 C3orf79P0CE67 100 aa9.24□□□□□ -0.93
NUP50-204ENST00000417702 LINC01545Q5VT33 79 aa9.24□□□□□ -0.93
NUP50-204ENST00000417702 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
NUP50-204ENST00000417702 RPL28P46779 137 aaKnown RBP9.23□□□□□ -0.93
NUP50-204ENST00000417702 KRTDAPP60985 99 aa9.23□□□□□ -0.93
NUP50-204ENST00000417702 SND1-IT1Q9HBX3 110 aa9.23□□□□□ -0.93
NUP50-204ENST00000417702 MYMXA0A1B0GTQ4 84 aa9.22□□□□□ -0.93
NUP50-204ENST00000417702 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
NUP50-204ENST00000417702 HERV-K104P63124 156 aa9.22□□□□□ -0.93
NUP50-204ENST00000417702 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
NUP50-204ENST00000417702 C20orf202A1L168 122 aa9.21□□□□□ -0.94
NUP50-204ENST00000417702 S100A2P29034 98 aa9.21□□□□□ -0.94
NUP50-204ENST00000417702 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
NUP50-204ENST00000417702 LINC00587B1AMM8 73 aa9.2□□□□□ -0.94
NUP50-204ENST00000417702 J3QQQ9 107 aa9.2□□□□□ -0.94
NUP50-204ENST00000417702 LGALS3P17931 250 aaKnown RBP9.2□□□□□ -0.94
NUP50-204ENST00000417702 LINC00158P58513 81 aa9.2□□□□□ -0.94
NUP50-204ENST00000417702 MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
NUP50-204ENST00000417702 HIST3H2BBQ8N257 126 aa9.2□□□□□ -0.94
NUP50-204ENST00000417702 VPREB1P12018 145 aa9.19□□□□□ -0.94
NUP50-204ENST00000417702 RPL13AP40429 203 aaKnown RBP9.19□□□□□ -0.94
NUP50-204ENST00000417702 NMUP48645 174 aa9.19□□□□□ -0.94
NUP50-204ENST00000417702 IGKV2-28A0A075B6P5 120 aa9.18□□□□□ -0.94
NUP50-204ENST00000417702 E9PLD3 99 aa9.18□□□□□ -0.94
NUP50-204ENST00000417702 IGKV2D-28P01615 120 aa9.18□□□□□ -0.94
NUP50-204ENST00000417702 UBE2AP49459 152 aa9.18□□□□□ -0.94
NUP50-204ENST00000417702 AKR1D1P51857 326 aa9.18□□□□□ -0.94
NUP50-204ENST00000417702 TSPEAR-AS2P59090 65 aa9.18□□□□□ -0.94
NUP50-204ENST00000417702 A0A0U1RRA0 63 aa9.17□□□□□ -0.94
NUP50-204ENST00000417702 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
NUP50-204ENST00000417702 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
NUP50-204ENST00000417702 SNRPEP62304 92 aaKnown RBP9.15□□□□□ -0.94
NUP50-204ENST00000417702 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
NUP50-204ENST00000417702 KRTAP13-1Q8IUC0 172 aa9.12□□□□□ -0.95
NUP50-204ENST00000417702 MIR7-3HGQ8N6C7 128 aa9.12□□□□□ -0.95
NUP50-204ENST00000417702 Q8NDZ9 215 aa9.12□□□□□ -0.95
NUP50-204ENST00000417702 TMEM126AQ9H061 195 aa9.12□□□□□ -0.95
NUP50-204ENST00000417702 C5orf52A6NGY3 159 aa9.11□□□□□ -0.95
NUP50-204ENST00000417702 TMEM238C9JI98 176 aa9.11□□□□□ -0.95
NUP50-204ENST00000417702 CRYGAP11844 174 aa9.11□□□□□ -0.95
NUP50-204ENST00000417702 UBR4Q5T4S7 5183 aa9.11□□□□□ -0.95
NUP50-204ENST00000417702 M0R378 163 aa9.1□□□□□ -0.95
NUP50-204ENST00000417702 PRLHP81277 87 aa9.1□□□□□ -0.95
NUP50-204ENST00000417702 BOD1L2Q8IYS8 172 aa9.1□□□□□ -0.95
NUP50-204ENST00000417702 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
NUP50-204ENST00000417702 A0A0J9YXY3 114 aa9.09□□□□□ -0.95
NUP50-204ENST00000417702 LRP2P98164 4655 aa9.08□□□□□ -0.96
NUP50-204ENST00000417702 IGKV2D-26A0A0A0MRZ7 120 aa9.08□□□□□ -0.96
NUP50-204ENST00000417702 ZNF815PA8K554 130 aa9.08□□□□□ -0.96
NUP50-204ENST00000417702 A0A087X002 238 aa9.07□□□□□ -0.96
NUP50-204ENST00000417702 DAND5Q8N907 189 aa9.07□□□□□ -0.96
NUP50-204ENST00000417702 TYMSOSQ8TAI1 123 aa9.07□□□□□ -0.96
NUP50-204ENST00000417702 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
NUP50-204ENST00000417702 MIEN1Q9BRT3 115 aa9.06□□□□□ -0.96
NUP50-204ENST00000417702 ANAPC11Q9NYG5 84 aa9.06□□□□□ -0.96
NUP50-204ENST00000417702 LOC107984156A0A0G2JMH3 177 aa9.05□□□□□ -0.96
NUP50-204ENST00000417702 HSBP1L1C9JCN9 74 aa9.05□□□□□ -0.96
NUP50-204ENST00000417702 NCR3O14931 201 aa9.05□□□□□ -0.96
NUP50-204ENST00000417702 FAM229BQ4G0N7 80 aa9.05□□□□□ -0.96
NUP50-204ENST00000417702 ARL17AQ8IVW1 177 aa9.05□□□□□ -0.96
NUP50-204ENST00000417702 TIMM17BO60830 172 aa9.04□□□□□ -0.96
NUP50-204ENST00000417702 SCGB1D1O95968 90 aa9.04□□□□□ -0.96
NUP50-204ENST00000417702 TTTY13Q9BZ97 58 aa9.04□□□□□ -0.96
NUP50-204ENST00000417702 PRYO14603 147 aa9.03□□□□□ -0.96
NUP50-204ENST00000417702 HIGD2AQ9BW72 106 aa9.03□□□□□ -0.96
NUP50-204ENST00000417702 TSPAN13O95857 204 aa9.02□□□□□ -0.97
NUP50-204ENST00000417702 S100A12P80511 92 aa9.02□□□□□ -0.97
NUP50-204ENST00000417702 ADAMTSL4-AS1Q5T5F5 129 aa9.02□□□□□ -0.97
NUP50-204ENST00000417702 SCGB1D4Q6XE38 83 aa9.02□□□□□ -0.97
NUP50-204ENST00000417702 PRR4Q16378 134 aa9.01□□□□□ -0.97
NUP50-204ENST00000417702 KCNQ1DNQ9H478 68 aa9.01□□□□□ -0.97
NUP50-204ENST00000417702 TRBV10-3A0A0K0K1G6 114 aa9□□□□□ -0.97
NUP50-204ENST00000417702 NDUFC2O95298 119 aa9□□□□□ -0.97
NUP50-204ENST00000417702 NPC2P61916 151 aa9□□□□□ -0.97
NUP50-204ENST00000417702 KRTAP13-2Q52LG2 175 aa9□□□□□ -0.97
NUP50-204ENST00000417702 LITAFQ99732 161 aa9□□□□□ -0.97
NUP50-204ENST00000417702 TRBV10-2A0A0K0K1G8 114 aa8.99□□□□□ -0.97
NUP50-204ENST00000417702 ETDCA0A1B0GVM5 59 aa8.99□□□□□ -0.97
NUP50-204ENST00000417702 PCP2Q8IVA1 136 aa8.99□□□□□ -0.97
NUP50-204ENST00000417702 LINC00337Q8N6G1 96 aa8.99□□□□□ -0.97
NUP50-204ENST00000417702 SPANXB1Q9NS25 103 aaPredicted RBP8.99□□□□□ -0.97
NUP50-204ENST00000417702 SPRR1AP35321 89 aa8.98□□□□□ -0.97
NUP50-204ENST00000417702 SOSTDC1Q6X4U4 206 aa8.98□□□□□ -0.97
NUP50-204ENST00000417702 LINC00308Q8TCZ7 52 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms