RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 ACACBO00763 2458 aa4.23□□□□□ -1.73
CLIP4-205ENST00000415891 INSP01308 110 aa4.23□□□□□ -1.73
CLIP4-205ENST00000415891 RPL39P62891 51 aaKnown RBP4.23□□□□□ -1.73
CLIP4-205ENST00000415891 MRPS21P82921 87 aaKnown RBP4.23□□□□□ -1.73
CLIP4-205ENST00000415891 C10orf55Q5SWW7 151 aa4.23□□□□□ -1.73
CLIP4-205ENST00000415891 LEAP2Q969E1 77 aa4.23□□□□□ -1.73
CLIP4-205ENST00000415891 MAP1BP46821 2468 aaKnown RBP4.22□□□□□ -1.73
CLIP4-205ENST00000415891 NBEAQ8NFP9 2946 aa4.22□□□□□ -1.73
CLIP4-205ENST00000415891 ZNF861PO60384 105 aa4.22□□□□□ -1.73
CLIP4-205ENST00000415891 KCNQ1DNQ9H478 68 aa4.22□□□□□ -1.73
CLIP4-205ENST00000415891 KNL1Q8NG31 2342 aa4.22□□□□□ -1.73
CLIP4-205ENST00000415891 DCHS1Q96JQ0 3298 aa4.22□□□□□ -1.73
CLIP4-205ENST00000415891 PTPRQQ9UMZ3 2332 aa4.22□□□□□ -1.73
CLIP4-205ENST00000415891 NCOR2Q9Y618 2525 aa4.22□□□□□ -1.73
CLIP4-205ENST00000415891 MGPP08493 103 aa4.21□□□□□ -1.73
CLIP4-205ENST00000415891 CCL3L1P16619 93 aa4.21□□□□□ -1.73
CLIP4-205ENST00000415891 Q6YL49 198 aa4.21□□□□□ -1.73
CLIP4-205ENST00000415891 TMEM167AQ8TBQ9 72 aa4.21□□□□□ -1.73
CLIP4-205ENST00000415891 ATRXP46100 2492 aa4.21□□□□□ -1.74
CLIP4-205ENST00000415891 TRGV4A0A0C4DH28 118 aa4.21□□□□□ -1.74
CLIP4-205ENST00000415891 SMIM11BQ8TCY0 68 aa4.21□□□□□ -1.74
CLIP4-205ENST00000415891 FAM208BQ5VWN6 2430 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 C5orf42Q9H799 3197 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 IGKV3OR2-268A0A0C4DH90 116 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 H3BQ85 93 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 LINC01565O15544 149 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 LINC00612Q8N6U2 182 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 CHD8Q9HCK8 2581 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 CHD6Q8TD26 2715 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 UQCR11O14957 56 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 SLPIP03973 132 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 TRIOO75962 3097 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 CEP250Q9BV73 2442 aa4.2□□□□□ -1.74
CLIP4-205ENST00000415891 F5P12259 2224 aa4.19□□□□□ -1.74
CLIP4-205ENST00000415891 IGLV7-46A0A075B6I9 117 aa4.19□□□□□ -1.74
CLIP4-205ENST00000415891 Q5W150 140 aa4.19□□□□□ -1.74
CLIP4-205ENST00000415891 USP24Q9UPU5 2620 aa4.19□□□□□ -1.74
CLIP4-205ENST00000415891 POLR2KP53803 58 aaKnown RBP4.19□□□□□ -1.74
CLIP4-205ENST00000415891 ZNF292O60281 2723 aa4.19□□□□□ -1.74
CLIP4-205ENST00000415891 TRBV6-4A0A1B0GX49 114 aa4.18□□□□□ -1.74
CLIP4-205ENST00000415891 SLURP1P55000 103 aa4.18□□□□□ -1.74
CLIP4-205ENST00000415891 XP32Q5T750 250 aa4.18□□□□□ -1.74
CLIP4-205ENST00000415891 FASNP49327 2511 aaKnown RBP4.17□□□□□ -1.74
CLIP4-205ENST00000415891 A0A1W2PNU3 283 aaPredicted RBP4.17□□□□□ -1.74
CLIP4-205ENST00000415891 PRB3Q04118 309 aaPredicted RBP4.17□□□□□ -1.74
CLIP4-205ENST00000415891 MRGPRG-AS1Q2M3A8 158 aa4.17□□□□□ -1.74
CLIP4-205ENST00000415891 EP300Q09472 2414 aaPredicted RBP4.17□□□□□ -1.74
CLIP4-205ENST00000415891 M0R2N4 97 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 OTOGLQ3ZCN5 2332 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 SPTBN2O15020 2390 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 WDR87Q6ZQQ6 2873 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 I3L2K1 104 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 IGFL4Q6B9Z1 124 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 ST20-AS1Q8NBB2 130 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 DEFB104AQ8WTQ1 72 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 ZNRD1Q9P1U0 126 aa4.16□□□□□ -1.74
CLIP4-205ENST00000415891 GPR179Q6PRD1 2367 aa4.15□□□□□ -1.74
CLIP4-205ENST00000415891 IGLV1-40P01703 118 aa4.15□□□□□ -1.74
CLIP4-205ENST00000415891 WWC2-AS2Q96NR7 200 aa4.15□□□□□ -1.74
CLIP4-205ENST00000415891 KLK12Q9UKR0 248 aa4.15□□□□□ -1.74
CLIP4-205ENST00000415891 DMXL1Q9Y485 3027 aa4.15□□□□□ -1.74
CLIP4-205ENST00000415891 FRYQ5TBA9 3013 aa4.15□□□□□ -1.75
CLIP4-205ENST00000415891 MRPL33O75394 65 aaKnown RBP4.15□□□□□ -1.75
CLIP4-205ENST00000415891 ANKRD17O75179 2603 aaKnown RBP4.14□□□□□ -1.75
CLIP4-205ENST00000415891 APELAP0DMC3 54 aa4.14□□□□□ -1.75
CLIP4-205ENST00000415891 LINC00315P59091 139 aa4.14□□□□□ -1.75
CLIP4-205ENST00000415891 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
CLIP4-205ENST00000415891 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
CLIP4-205ENST00000415891 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
CLIP4-205ENST00000415891 Q8N9L7 120 aa4.13□□□□□ -1.75
CLIP4-205ENST00000415891 MED13LQ71F56 2210 aa4.13□□□□□ -1.75
CLIP4-205ENST00000415891 CFAP47Q6ZTR5 3102 aa4.13□□□□□ -1.75
CLIP4-205ENST00000415891 MYO15AQ9UKN7 3530 aa4.13□□□□□ -1.75
CLIP4-205ENST00000415891 K7EIM0 57 aa4.12□□□□□ -1.75
CLIP4-205ENST00000415891 SORL1Q92673 2214 aa4.12□□□□□ -1.75
CLIP4-205ENST00000415891 ANKRD11Q6UB99 2663 aaPredicted RBP4.12□□□□□ -1.75
CLIP4-205ENST00000415891 COL27A1Q8IZC6 1860 aaPredicted RBP4.12□□□□□ -1.75
CLIP4-205ENST00000415891 A0A087WTM6 91 aa4.12□□□□□ -1.75
CLIP4-205ENST00000415891 PROK1P58294 105 aa4.12□□□□□ -1.75
CLIP4-205ENST00000415891 LINC00158P58513 81 aa4.12□□□□□ -1.75
CLIP4-205ENST00000415891 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
CLIP4-205ENST00000415891 WDFY3Q8IZQ1 3526 aa4.12□□□□□ -1.75
CLIP4-205ENST00000415891 URB1O60287 2271 aaKnown RBP4.11□□□□□ -1.75
CLIP4-205ENST00000415891 DEFB103AP81534 67 aa4.11□□□□□ -1.75
CLIP4-205ENST00000415891 ZFHX4Q86UP3 3567 aa4.11□□□□□ -1.75
CLIP4-205ENST00000415891 COX7BP24311 80 aa4.1□□□□□ -1.75
CLIP4-205ENST00000415891 PRR9Q5T870 116 aa4.1□□□□□ -1.75
CLIP4-205ENST00000415891 SPINT4Q6UDR6 99 aa4.1□□□□□ -1.75
CLIP4-205ENST00000415891 ZFYVE26Q68DK2 2539 aa4.09□□□□□ -1.75
CLIP4-205ENST00000415891 ASXL3Q9C0F0 2248 aa4.09□□□□□ -1.75
CLIP4-205ENST00000415891 FRYLO94915 3013 aa4.09□□□□□ -1.75
CLIP4-205ENST00000415891 SETXQ7Z333 2677 aaKnown RBP4.09□□□□□ -1.75
CLIP4-205ENST00000415891 Q8N1X5 172 aa4.09□□□□□ -1.75
CLIP4-205ENST00000415891 SPEGQ15772 3267 aa4.09□□□□□ -1.75
CLIP4-205ENST00000415891 DMDP11532 3685 aa4.09□□□□□ -1.75
CLIP4-205ENST00000415891 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.07□□□□□ -1.76
CLIP4-205ENST00000415891 C16orf74Q96GX8 76 aa4.07□□□□□ -1.76
CLIP4-205ENST00000415891 CNOT1A5YKK6 2376 aaKnown RBP4.07□□□□□ -1.76
CLIP4-205ENST00000415891 LAMA1P25391 3075 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms