RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 LINC00158P58513 81 aa9.08□□□□□ -0.96
ACTB-202ENST00000414620 NDUFA5Q16718 116 aa9.08□□□□□ -0.96
ACTB-202ENST00000414620 RETNLBQ9BQ08 111 aa9.08□□□□□ -0.96
ACTB-202ENST00000414620 FAM229BQ4G0N7 80 aa9.07□□□□□ -0.96
ACTB-202ENST00000414620 SVBPQ8N300 66 aa9.07□□□□□ -0.96
ACTB-202ENST00000414620 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
ACTB-202ENST00000414620 SFTA2Q6UW10 78 aa9.06□□□□□ -0.96
ACTB-202ENST00000414620 LINC00304Q8N9R0 145 aa9.06□□□□□ -0.96
ACTB-202ENST00000414620 IFI27L1Q96BM0 104 aa9.06□□□□□ -0.96
ACTB-202ENST00000414620 IGKV2D-26A0A0A0MRZ7 120 aa9.05□□□□□ -0.96
ACTB-202ENST00000414620 CBLN2Q8IUK8 224 aa9.04□□□□□ -0.96
ACTB-202ENST00000414620 CHCHD1Q96BP2 118 aaKnown RBP9.04□□□□□ -0.96
ACTB-202ENST00000414620 HIGD2AQ9BW72 106 aa9.04□□□□□ -0.96
ACTB-202ENST00000414620 TRAV12-1A0A0B4J245 112 aa9.03□□□□□ -0.96
ACTB-202ENST00000414620 SMIM13P0DJ93 91 aa9.03□□□□□ -0.96
ACTB-202ENST00000414620 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
ACTB-202ENST00000414620 YPEL4Q96NS1 127 aa9.03□□□□□ -0.96
ACTB-202ENST00000414620 NCR3O14931 201 aa9.02□□□□□ -0.97
ACTB-202ENST00000414620 C3orf22Q8N5N4 141 aa9.02□□□□□ -0.97
ACTB-202ENST00000414620 PLEKHB2Q96CS7 222 aa9.02□□□□□ -0.97
ACTB-202ENST00000414620 H0Y8G0 127 aa9.01□□□□□ -0.97
ACTB-202ENST00000414620 FAM19A2Q8N3H0 131 aa9.01□□□□□ -0.97
ACTB-202ENST00000414620 ATP6V1G1O75348 118 aa9□□□□□ -0.97
ACTB-202ENST00000414620 HSBP1O75506 76 aa9□□□□□ -0.97
ACTB-202ENST00000414620 BOD1L2Q8IYS8 172 aa8.99□□□□□ -0.97
ACTB-202ENST00000414620 MIR7-3HGQ8N6C7 128 aa8.99□□□□□ -0.97
ACTB-202ENST00000414620 PRYO14603 147 aa8.97□□□□□ -0.97
ACTB-202ENST00000414620 SPRR4Q96PI1 79 aa8.97□□□□□ -0.97
ACTB-202ENST00000414620 NDUFA12Q9UI09 145 aa8.96□□□□□ -0.98
ACTB-202ENST00000414620 TSPEAR-AS2P59090 65 aa8.95□□□□□ -0.98
ACTB-202ENST00000414620 HERV-K104P63124 156 aa8.95□□□□□ -0.98
ACTB-202ENST00000414620 TRGC2P03986 189 aa8.94□□□□□ -0.98
ACTB-202ENST00000414620 IGLV7-46A0A075B6I9 117 aa8.93□□□□□ -0.98
ACTB-202ENST00000414620 MYMXA0A1B0GTQ4 84 aa8.93□□□□□ -0.98
ACTB-202ENST00000414620 LINC00310P59036 64 aa8.93□□□□□ -0.98
ACTB-202ENST00000414620 DAND5Q8N907 189 aa8.93□□□□□ -0.98
ACTB-202ENST00000414620 PPDPFQ9H3Y8 114 aa8.93□□□□□ -0.98
ACTB-202ENST00000414620 ZNF706Q9Y5V0 76 aaPredicted RBP8.93□□□□□ -0.98
ACTB-202ENST00000414620 TRBV10-3A0A0K0K1G6 114 aa8.92□□□□□ -0.98
ACTB-202ENST00000414620 ETDCA0A1B0GVM5 59 aa8.92□□□□□ -0.98
ACTB-202ENST00000414620 SERF1AO75920 110 aa8.92□□□□□ -0.98
ACTB-202ENST00000414620 LEPROTL1O95214 131 aa8.92□□□□□ -0.98
ACTB-202ENST00000414620 SPRR1AP35321 89 aa8.92□□□□□ -0.98
ACTB-202ENST00000414620 SMCR5Q8TEV8 140 aa8.92□□□□□ -0.98
ACTB-202ENST00000414620 CDIP1Q9H305 208 aa8.92□□□□□ -0.98
ACTB-202ENST00000414620 MUC2Q02817 5179 aa8.92□□□□□ -0.98
ACTB-202ENST00000414620 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
ACTB-202ENST00000414620 LINC00337Q8N6G1 96 aa8.91□□□□□ -0.98
ACTB-202ENST00000414620 MAP1LC3CQ9BXW4 147 aa8.91□□□□□ -0.98
ACTB-202ENST00000414620 KCNQ1DNQ9H478 68 aa8.91□□□□□ -0.98
ACTB-202ENST00000414620 LINC00587B1AMM8 73 aa8.9□□□□□ -0.98
ACTB-202ENST00000414620 LEPROTO15243 131 aa8.9□□□□□ -0.98
ACTB-202ENST00000414620 TPRXLQ17RH7 258 aa8.9□□□□□ -0.98
ACTB-202ENST00000414620 PMCHL2Q9BQD1 86 aa8.9□□□□□ -0.98
ACTB-202ENST00000414620 KRTAP4-16G5E9R7 235 aaPredicted RBP8.89□□□□□ -0.99
ACTB-202ENST00000414620 FABP4P15090 132 aa8.89□□□□□ -0.99
ACTB-202ENST00000414620 Q8NBF4 154 aa8.89□□□□□ -0.99
ACTB-202ENST00000414620 SPAG11AQ6PDA7 123 aa8.88□□□□□ -0.99
ACTB-202ENST00000414620 J3QQQ9 107 aa8.87□□□□□ -0.99
ACTB-202ENST00000414620 PLNP26678 52 aa8.87□□□□□ -0.99
ACTB-202ENST00000414620 C4orf48Q5BLP8 95 aa8.87□□□□□ -0.99
ACTB-202ENST00000414620 DPM2O94777 84 aa8.86□□□□□ -0.99
ACTB-202ENST00000414620 DDTP30046 118 aa8.86□□□□□ -0.99
ACTB-202ENST00000414620 HERVK_113P61574 105 aa8.86□□□□□ -0.99
ACTB-202ENST00000414620 CTAG1AP78358 180 aa8.86□□□□□ -0.99
ACTB-202ENST00000414620 S100A12P80511 92 aa8.86□□□□□ -0.99
ACTB-202ENST00000414620 GAGE2AQ6NT46 116 aa8.86□□□□□ -0.99
ACTB-202ENST00000414620 HSPB8Q9UJY1 196 aa8.86□□□□□ -0.99
ACTB-202ENST00000414620 B5MCH6 92 aa8.85□□□□□ -0.99
ACTB-202ENST00000414620 ERC2-IT1O76042 136 aa8.85□□□□□ -0.99
ACTB-202ENST00000414620 LGALS3P17931 250 aaKnown RBP8.85□□□□□ -0.99
ACTB-202ENST00000414620 MUC17Q685J3 4493 aa8.84□□□□□ -0.99
ACTB-202ENST00000414620 IGKCP01834 107 aa8.84□□□□□ -0.99
ACTB-202ENST00000414620 NPC2P61916 151 aa8.84□□□□□ -0.99
ACTB-202ENST00000414620 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
ACTB-202ENST00000414620 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
ACTB-202ENST00000414620 LINC00483Q53H64 154 aa8.83□□□□□ -1
ACTB-202ENST00000414620 LOC107984156A0A0G2JMH3 177 aa8.82□□□□□ -1
ACTB-202ENST00000414620 TRBV10-2A0A0K0K1G8 114 aa8.82□□□□□ -1
ACTB-202ENST00000414620 MOBPQ13875 183 aa8.82□□□□□ -1
ACTB-202ENST00000414620 ARL17AQ8IVW1 177 aa8.82□□□□□ -1
ACTB-202ENST00000414620 SLC7A5P1Q8MH63 180 aa8.82□□□□□ -1
ACTB-202ENST00000414620 Q9BRP9 147 aa8.82□□□□□ -1
ACTB-202ENST00000414620 SPANXB1Q9NS25 103 aaPredicted RBP8.82□□□□□ -1
ACTB-202ENST00000414620 NMUP48645 174 aa8.81□□□□□ -1
ACTB-202ENST00000414620 S100A7L2Q5SY68 101 aa8.81□□□□□ -1
ACTB-202ENST00000414620 SOSTDC1Q6X4U4 206 aa8.8□□□□□ -1
ACTB-202ENST00000414620 Q6ZRX8 168 aa8.8□□□□□ -1
ACTB-202ENST00000414620 FP248Q71RG6 208 aaPredicted RBP8.8□□□□□ -1
ACTB-202ENST00000414620 COLCA2A8K830 154 aa8.79□□□□□ -1
ACTB-202ENST00000414620 EIF4EBP3O60516 100 aaPredicted RBP8.79□□□□□ -1
ACTB-202ENST00000414620 TRAV23DV6A0A075B6W5 121 aa8.78□□□□□ -1
ACTB-202ENST00000414620 A0A0J9YXY3 114 aa8.78□□□□□ -1
ACTB-202ENST00000414620 SPINK1P00995 79 aa8.78□□□□□ -1
ACTB-202ENST00000414620 NDUFC2O95298 119 aa8.77□□□□□ -1.01
ACTB-202ENST00000414620 IGLV6-57P01721 117 aa8.77□□□□□ -1.01
ACTB-202ENST00000414620 ADAMTSL4-AS1Q5T5F5 129 aa8.77□□□□□ -1.01
ACTB-202ENST00000414620 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
ACTB-202ENST00000414620 E9PLD3 99 aa8.76□□□□□ -1.01
ACTB-202ENST00000414620 KRTAP13-3Q3SY46 172 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms