RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 IGKCP01834 107 aa12.46□□□□□ -0.41
LMBR1-203ENST00000414218 SPINK8P0C7L1 97 aa12.46□□□□□ -0.41
LMBR1-203ENST00000414218 AKR1D1P51857 326 aa12.46□□□□□ -0.41
LMBR1-203ENST00000414218 SNRPEP62304 92 aaKnown RBP12.46□□□□□ -0.41
LMBR1-203ENST00000414218 COX7B2Q8TF08 81 aa12.46□□□□□ -0.41
LMBR1-203ENST00000414218 XAGE1AQ9HD64 81 aa12.45□□□□□ -0.42
LMBR1-203ENST00000414218 SFTA2Q6UW10 78 aa12.44□□□□□ -0.42
LMBR1-203ENST00000414218 C22orf24Q9Y442 160 aa12.43□□□□□ -0.42
LMBR1-203ENST00000414218 KRTDAPP60985 99 aa12.42□□□□□ -0.42
LMBR1-203ENST00000414218 C20orf202A1L168 122 aa12.41□□□□□ -0.42
LMBR1-203ENST00000414218 KRTAP1-4P0C5Y4 121 aa12.41□□□□□ -0.42
LMBR1-203ENST00000414218 LBHQ53QV2 105 aaPredicted RBP12.39□□□□□ -0.43
LMBR1-203ENST00000414218 PMCHL2Q9BQD1 86 aa12.39□□□□□ -0.43
LMBR1-203ENST00000414218 IGLV1-50A0A075B6I6 118 aa12.38□□□□□ -0.43
LMBR1-203ENST00000414218 HERVK_113P61574 105 aa12.38□□□□□ -0.43
LMBR1-203ENST00000414218 LEPROTO15243 131 aa12.36□□□□□ -0.43
LMBR1-203ENST00000414218 ZNF861PO60384 105 aa12.36□□□□□ -0.43
LMBR1-203ENST00000414218 PLEKHB2Q96CS7 222 aa12.36□□□□□ -0.43
LMBR1-203ENST00000414218 ZNF625Q96I27 306 aaPredicted RBP12.36□□□□□ -0.43
LMBR1-203ENST00000414218 MRPL55Q7Z7F7 128 aaKnown RBP12.35□□□□□ -0.43
LMBR1-203ENST00000414218 TP73-AS1Q9UF72 201 aa12.35□□□□□ -0.43
LMBR1-203ENST00000414218 E9PLD3 99 aa12.34□□□□□ -0.43
LMBR1-203ENST00000414218 COX17Q14061 63 aa12.33□□□□□ -0.44
LMBR1-203ENST00000414218 NMUP48645 174 aa12.32□□□□□ -0.44
LMBR1-203ENST00000414218 HERV-K104P63124 156 aa12.32□□□□□ -0.44
LMBR1-203ENST00000414218 J3QQQ9 107 aa12.31□□□□□ -0.44
LMBR1-203ENST00000414218 LINC00167Q96N53 147 aa12.31□□□□□ -0.44
LMBR1-203ENST00000414218 RPL37AP8A6NKH3 93 aa12.3□□□□□ -0.44
LMBR1-203ENST00000414218 LINC00587B1AMM8 73 aa12.3□□□□□ -0.44
LMBR1-203ENST00000414218 RPL13AP40429 203 aaKnown RBP12.3□□□□□ -0.44
LMBR1-203ENST00000414218 MYMXA0A1B0GTQ4 84 aa12.29□□□□□ -0.44
LMBR1-203ENST00000414218 GAGE10A6NGK3 116 aa12.29□□□□□ -0.44
LMBR1-203ENST00000414218 BCE1O60756 84 aa12.29□□□□□ -0.44
LMBR1-203ENST00000414218 NDUFA12Q9UI09 145 aa12.29□□□□□ -0.44
LMBR1-203ENST00000414218 RPL28P46779 137 aaKnown RBP12.27□□□□□ -0.45
LMBR1-203ENST00000414218 RNF213Q63HN8 5207 aa12.26□□□□□ -0.45
LMBR1-203ENST00000414218 LGALS3P17931 250 aaKnown RBP12.26□□□□□ -0.45
LMBR1-203ENST00000414218 TSPEAR-AS2P59090 65 aa12.26□□□□□ -0.45
LMBR1-203ENST00000414218 ERG28Q9UKR5 140 aa12.26□□□□□ -0.45
LMBR1-203ENST00000414218 IGLV5-37A0A075B6J1 123 aa12.25□□□□□ -0.45
LMBR1-203ENST00000414218 TMA7Q9Y2S6 64 aaKnown RBP12.25□□□□□ -0.45
LMBR1-203ENST00000414218 PFN2P35080 140 aa12.24□□□□□ -0.45
LMBR1-203ENST00000414218 NKAPP1Q8N9T2 125 aa12.24□□□□□ -0.45
LMBR1-203ENST00000414218 LPAP08519 4548 aa12.23□□□□□ -0.45
LMBR1-203ENST00000414218 SCGB1D1O95968 90 aa12.22□□□□□ -0.45
LMBR1-203ENST00000414218 JOSD1Q15040 202 aaPredicted RBP12.21□□□□□ -0.45
LMBR1-203ENST00000414218 ATOH7Q8N100 152 aa12.21□□□□□ -0.45
LMBR1-203ENST00000414218 A0A087X002 238 aa12.2□□□□□ -0.46
LMBR1-203ENST00000414218 IGKV2D-26A0A0A0MRZ7 120 aa12.2□□□□□ -0.46
LMBR1-203ENST00000414218 PRR4Q16378 134 aa12.2□□□□□ -0.46
LMBR1-203ENST00000414218 HSBP1L1C9JCN9 74 aa12.19□□□□□ -0.46
LMBR1-203ENST00000414218 ANKRD39Q53RE8 183 aa12.19□□□□□ -0.46
LMBR1-203ENST00000414218 IGKV2-28A0A075B6P5 120 aa12.18□□□□□ -0.46
LMBR1-203ENST00000414218 TSPAN13O95857 204 aa12.18□□□□□ -0.46
LMBR1-203ENST00000414218 IGKV2D-28P01615 120 aa12.18□□□□□ -0.46
LMBR1-203ENST00000414218 UBE2AP49459 152 aa12.18□□□□□ -0.46
LMBR1-203ENST00000414218 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
LMBR1-203ENST00000414218 CRYGAP11844 174 aa12.17□□□□□ -0.46
LMBR1-203ENST00000414218 LINC00158P58513 81 aa12.17□□□□□ -0.46
LMBR1-203ENST00000414218 KRTAP13-1Q8IUC0 172 aa12.17□□□□□ -0.46
LMBR1-203ENST00000414218 ANAPC11Q9NYG5 84 aa12.17□□□□□ -0.46
LMBR1-203ENST00000414218 LOC107984156A0A0G2JMH3 177 aa12.16□□□□□ -0.46
LMBR1-203ENST00000414218 A0A0J9YXY3 114 aa12.16□□□□□ -0.46
LMBR1-203ENST00000414218 SMIM13P0DJ93 91 aa12.16□□□□□ -0.46
LMBR1-203ENST00000414218 MEIG1Q5JSS6 88 aa12.16□□□□□ -0.46
LMBR1-203ENST00000414218 ARL17AQ8IVW1 177 aa12.16□□□□□ -0.46
LMBR1-203ENST00000414218 TIMM17BO60830 172 aa12.15□□□□□ -0.46
LMBR1-203ENST00000414218 VPREB1P12018 145 aa12.15□□□□□ -0.46
LMBR1-203ENST00000414218 TYMSOSQ8TAI1 123 aa12.15□□□□□ -0.46
LMBR1-203ENST00000414218 ZNF815PA8K554 130 aa12.14□□□□□ -0.47
LMBR1-203ENST00000414218 RPL24P83731 157 aaKnown RBP12.12□□□□□ -0.47
LMBR1-203ENST00000414218 MIR7-3HGQ8N6C7 128 aa12.12□□□□□ -0.47
LMBR1-203ENST00000414218 TMEM238C9JI98 176 aa12.11□□□□□ -0.47
LMBR1-203ENST00000414218 Q8NDZ9 215 aa12.11□□□□□ -0.47
LMBR1-203ENST00000414218 PRLHP81277 87 aa12.1□□□□□ -0.47
LMBR1-203ENST00000414218 KRTAP13-2Q52LG2 175 aa12.1□□□□□ -0.47
LMBR1-203ENST00000414218 A0A0U1RRA0 63 aa12.09□□□□□ -0.47
LMBR1-203ENST00000414218 PYY3Q5JQD4 70 aa12.09□□□□□ -0.47
LMBR1-203ENST00000414218 FAM19A1Q7Z5A9 133 aa12.09□□□□□ -0.47
LMBR1-203ENST00000414218 PCP2Q8IVA1 136 aa12.09□□□□□ -0.47
LMBR1-203ENST00000414218 LITAFQ99732 161 aa12.09□□□□□ -0.47
LMBR1-203ENST00000414218 TTTY13Q9BZ97 58 aa12.09□□□□□ -0.47
LMBR1-203ENST00000414218 TMEM126AQ9H061 195 aa12.09□□□□□ -0.47
LMBR1-203ENST00000414218 ADAMTSL4-AS1Q5T5F5 129 aa12.07□□□□□ -0.48
LMBR1-203ENST00000414218 PPDPFQ9H3Y8 114 aa12.07□□□□□ -0.48
LMBR1-203ENST00000414218 M0R378 163 aa12.06□□□□□ -0.48
LMBR1-203ENST00000414218 DLEU1O43261 78 aa12.06□□□□□ -0.48
LMBR1-203ENST00000414218 FAM229BQ4G0N7 80 aa12.06□□□□□ -0.48
LMBR1-203ENST00000414218 Q6ZVH6 145 aa12.06□□□□□ -0.48
LMBR1-203ENST00000414218 SCGB1D4Q6XE38 83 aa12.05□□□□□ -0.48
LMBR1-203ENST00000414218 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
LMBR1-203ENST00000414218 VAMP8Q9BV40 100 aa12.05□□□□□ -0.48
LMBR1-203ENST00000414218 COX8AP10176 69 aa12.04□□□□□ -0.48
LMBR1-203ENST00000414218 NDUFC2O95298 119 aa12.03□□□□□ -0.48
LMBR1-203ENST00000414218 SPANXDQ9BXN6 97 aa12.03□□□□□ -0.48
LMBR1-203ENST00000414218 SPANXCQ9NY87 97 aa12.03□□□□□ -0.48
LMBR1-203ENST00000414218 DAND5Q8N907 189 aa12.02□□□□□ -0.49
LMBR1-203ENST00000414218 MIEN1Q9BRT3 115 aa12.02□□□□□ -0.49
LMBR1-203ENST00000414218 IFITM1P13164 125 aa12.01□□□□□ -0.49
LMBR1-203ENST00000414218 SPATA45Q537H7 98 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms