RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SMIM13P0DJ93 91 aa6.08□□□□□ -1.44
NCKIPSD-202ENST00000413374 VPREB1P12018 145 aa6.08□□□□□ -1.44
NCKIPSD-202ENST00000413374 UBE2AP49459 152 aa6.08□□□□□ -1.44
NCKIPSD-202ENST00000413374 RPL24P83731 157 aaKnown RBP6.08□□□□□ -1.44
NCKIPSD-202ENST00000413374 COX17Q14061 63 aa6.08□□□□□ -1.44
NCKIPSD-202ENST00000413374 PMCHL2Q9BQD1 86 aa6.08□□□□□ -1.44
NCKIPSD-202ENST00000413374 TMEM238C9JI98 176 aa6.07□□□□□ -1.44
NCKIPSD-202ENST00000413374 ATP6V1G1O75348 118 aa6.07□□□□□ -1.44
NCKIPSD-202ENST00000413374 MEIG1Q5JSS6 88 aa6.07□□□□□ -1.44
NCKIPSD-202ENST00000413374 PRLHP81277 87 aa6.06□□□□□ -1.44
NCKIPSD-202ENST00000413374 FAM19A1Q7Z5A9 133 aa6.06□□□□□ -1.44
NCKIPSD-202ENST00000413374 TSPAN13O95857 204 aa6.05□□□□□ -1.44
NCKIPSD-202ENST00000413374 SFTA2Q6UW10 78 aa6.05□□□□□ -1.44
NCKIPSD-202ENST00000413374 HSPB8Q9UJY1 196 aa6.05□□□□□ -1.44
NCKIPSD-202ENST00000413374 LPAP08519 4548 aa6.04□□□□□ -1.44
NCKIPSD-202ENST00000413374 A0A087X002 238 aa6.04□□□□□ -1.44
NCKIPSD-202ENST00000413374 RPL13AP40429 203 aaKnown RBP6.04□□□□□ -1.44
NCKIPSD-202ENST00000413374 MIR7-3HGQ8N6C7 128 aa6.04□□□□□ -1.44
NCKIPSD-202ENST00000413374 TMEM126AQ9H061 195 aa6.04□□□□□ -1.44
NCKIPSD-202ENST00000413374 NDUFA12Q9UI09 145 aa6.04□□□□□ -1.44
NCKIPSD-202ENST00000413374 MYMXA0A1B0GTQ4 84 aa6.03□□□□□ -1.44
NCKIPSD-202ENST00000413374 M0R378 163 aa6.03□□□□□ -1.44
NCKIPSD-202ENST00000413374 NCR3O14931 201 aa6.03□□□□□ -1.44
NCKIPSD-202ENST00000413374 TSPEAR-AS2P59090 65 aa6.03□□□□□ -1.44
NCKIPSD-202ENST00000413374 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
NCKIPSD-202ENST00000413374 BOD1L2Q8IYS8 172 aa6.03□□□□□ -1.44
NCKIPSD-202ENST00000413374 RNF213Q63HN8 5207 aa6.03□□□□□ -1.44
NCKIPSD-202ENST00000413374 LEPROTO15243 131 aa6.02□□□□□ -1.45
NCKIPSD-202ENST00000413374 DPM2O94777 84 aa6.02□□□□□ -1.45
NCKIPSD-202ENST00000413374 CRYGAP11844 174 aa6.02□□□□□ -1.45
NCKIPSD-202ENST00000413374 HERV-K104P63124 156 aa6.02□□□□□ -1.45
NCKIPSD-202ENST00000413374 DAND5Q8N907 189 aa6.02□□□□□ -1.45
NCKIPSD-202ENST00000413374 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
NCKIPSD-202ENST00000413374 IGKCP01834 107 aa6.01□□□□□ -1.45
NCKIPSD-202ENST00000413374 PLNP26678 52 aa6.01□□□□□ -1.45
NCKIPSD-202ENST00000413374 PRR4Q16378 134 aa6.01□□□□□ -1.45
NCKIPSD-202ENST00000413374 MAP1LC3CQ9BXW4 147 aa6.01□□□□□ -1.45
NCKIPSD-202ENST00000413374 J3QQQ9 107 aa6□□□□□ -1.45
NCKIPSD-202ENST00000413374 HERVK_113P61574 105 aa6□□□□□ -1.45
NCKIPSD-202ENST00000413374 PLEKHB2Q96CS7 222 aa6□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIGD2AQ9BW72 106 aa6□□□□□ -1.45
NCKIPSD-202ENST00000413374 LINC00587B1AMM8 73 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BKO60814 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BJP06899 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 LGALS3P17931 250 aaKnown RBP5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BOP23527 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BBP33778 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BDP58876 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BCP62807 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST2H2BEQ16778 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 KRTAP13-2Q52LG2 175 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BHQ93079 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BNQ99877 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 HIST1H2BMQ99879 126 aa5.99□□□□□ -1.45
NCKIPSD-202ENST00000413374 NPC2P61916 151 aa5.98□□□□□ -1.45
NCKIPSD-202ENST00000413374 TRBV10-3A0A0K0K1G6 114 aa5.97□□□□□ -1.45
NCKIPSD-202ENST00000413374 IGKV2D-26A0A0A0MRZ7 120 aa5.96□□□□□ -1.46
NCKIPSD-202ENST00000413374 SYS1-DBNDD2H3BUS1 97 aa5.96□□□□□ -1.46
NCKIPSD-202ENST00000413374 ETDCA0A1B0GVM5 59 aa5.95□□□□□ -1.46
NCKIPSD-202ENST00000413374 FAM229BQ4G0N7 80 aa5.95□□□□□ -1.46
NCKIPSD-202ENST00000413374 ADAMTSL4-AS1Q5T5F5 129 aa5.95□□□□□ -1.46
NCKIPSD-202ENST00000413374 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
NCKIPSD-202ENST00000413374 SMCR5Q8TEV8 140 aa5.95□□□□□ -1.46
NCKIPSD-202ENST00000413374 A0A0J9YXY3 114 aa5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 E9PLD3 99 aa5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 PRYO14603 147 aa5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 EIF4EBP3O60516 100 aaPredicted RBP5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 DDTP30046 118 aa5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 NMUP48645 174 aa5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 MIEN1Q9BRT3 115 aa5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 PPDPFQ9H3Y8 114 aa5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 KCNQ1DNQ9H478 68 aa5.94□□□□□ -1.46
NCKIPSD-202ENST00000413374 SOSTDC1Q6X4U4 206 aa5.93□□□□□ -1.46
NCKIPSD-202ENST00000413374 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
NCKIPSD-202ENST00000413374 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
NCKIPSD-202ENST00000413374 RETNLBQ9BQ08 111 aa5.93□□□□□ -1.46
NCKIPSD-202ENST00000413374 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 C3orf79P0CE67 100 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 SPRR1AP35321 89 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 KRTDAPP60985 99 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 S100A12P80511 92 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 S100A7L2Q5SY68 101 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 PET117Q6UWS5 81 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 LINC00337Q8N6G1 96 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
NCKIPSD-202ENST00000413374 B5MCH6 92 aa5.91□□□□□ -1.46
NCKIPSD-202ENST00000413374 KRTAP4-16G5E9R7 235 aaPredicted RBP5.91□□□□□ -1.46
NCKIPSD-202ENST00000413374 LINC01545Q5VT33 79 aa5.91□□□□□ -1.46
NCKIPSD-202ENST00000413374 TRBV10-2A0A0K0K1G8 114 aa5.9□□□□□ -1.46
NCKIPSD-202ENST00000413374 ERC2-IT1O76042 136 aa5.9□□□□□ -1.46
NCKIPSD-202ENST00000413374 GAGE2AQ6NT46 116 aa5.9□□□□□ -1.46
NCKIPSD-202ENST00000413374 SPANXB1Q9NS25 103 aaPredicted RBP5.9□□□□□ -1.46
NCKIPSD-202ENST00000413374 ZNF815PA8K554 130 aa5.89□□□□□ -1.47
NCKIPSD-202ENST00000413374 NDUFC2O95298 119 aa5.89□□□□□ -1.47
NCKIPSD-202ENST00000413374 ZNF706Q9Y5V0 76 aaPredicted RBP5.89□□□□□ -1.47
NCKIPSD-202ENST00000413374 IGLV6-57P01721 117 aa5.88□□□□□ -1.47
NCKIPSD-202ENST00000413374 ATOH7Q8N100 152 aa5.88□□□□□ -1.47
NCKIPSD-202ENST00000413374 OR13C6PQ8NH95 151 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms