RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 KRTAP24-1Q3LI83 254 aa12.64□□□□□ -0.39
HCG11-201ENST00000411553 RTL8CO15255 209 aa12.62□□□□□ -0.39
HCG11-201ENST00000411553 PHF5AQ7RTV0 110 aaKnown RBP12.61□□□□□ -0.39
HCG11-201ENST00000411553 Q9UF83 564 aa12.6□□□□□ -0.39
HCG11-201ENST00000411553 NBDYA0A0U1RRE5 68 aa12.6□□□□□ -0.39
HCG11-201ENST00000411553 ELOF1P60002 83 aaKnown RBP12.6□□□□□ -0.39
HCG11-201ENST00000411553 MUC4Q99102 2169 aa12.6□□□□□ -0.39
HCG11-201ENST00000411553 IGLV5-45A0A087WSX0 123 aa12.6□□□□□ -0.39
HCG11-201ENST00000411553 TLN2Q9Y4G6 2542 aa12.58□□□□□ -0.4
HCG11-201ENST00000411553 USP9XQ93008 2570 aaPredicted RBP12.58□□□□□ -0.4
HCG11-201ENST00000411553 Q6ZRP5 223 aa12.58□□□□□ -0.4
HCG11-201ENST00000411553 Q8NBF4 154 aa12.57□□□□□ -0.4
HCG11-201ENST00000411553 A0A1B0GW54 56 aa12.57□□□□□ -0.4
HCG11-201ENST00000411553 ACYP2P14621 99 aa12.57□□□□□ -0.4
HCG11-201ENST00000411553 A0A1B0GU69 56 aa12.57□□□□□ -0.4
HCG11-201ENST00000411553 Q6ZRX8 168 aa12.56□□□□□ -0.4
HCG11-201ENST00000411553 TYMSOSQ8TAI1 123 aa12.55□□□□□ -0.4
HCG11-201ENST00000411553 C16orf90A8MZG2 172 aa12.55□□□□□ -0.4
HCG11-201ENST00000411553 EPM2AB3EWF7 344 aa12.55□□□□□ -0.4
HCG11-201ENST00000411553 LINC00476Q8WZB0 136 aa12.54□□□□□ -0.4
HCG11-201ENST00000411553 LINC00588Q9Y4M8 146 aa12.53□□□□□ -0.4
HCG11-201ENST00000411553 CHTF8P0CG12 524 aa12.53□□□□□ -0.4
HCG11-201ENST00000411553 Q8NAQ8 132 aa12.52□□□□□ -0.4
HCG11-201ENST00000411553 LINC00313P59037 77 aa12.52□□□□□ -0.41
HCG11-201ENST00000411553 CDIP1Q9H305 208 aa12.52□□□□□ -0.41
HCG11-201ENST00000411553 FAM218AQ96MZ4 157 aa12.51□□□□□ -0.41
HCG11-201ENST00000411553 GVQW2A0A096LPI5 108 aaPredicted RBP12.48□□□□□ -0.41
HCG11-201ENST00000411553 Q6ZQT0 140 aa12.47□□□□□ -0.41
HCG11-201ENST00000411553 BCE1O60756 84 aa12.47□□□□□ -0.41
HCG11-201ENST00000411553 ST20-AS1Q8NBB2 130 aa12.46□□□□□ -0.41
HCG11-201ENST00000411553 WWC2-AS2Q96NR7 200 aa12.46□□□□□ -0.41
HCG11-201ENST00000411553 LOC110117498A0A087WWA1 95 aa12.45□□□□□ -0.42
HCG11-201ENST00000411553 H3BPC8 53 aa12.45□□□□□ -0.42
HCG11-201ENST00000411553 COL4A2P08572 1712 aa12.44□□□□□ -0.42
HCG11-201ENST00000411553 SETD2Q9BYW2 2564 aaPredicted RBP12.43□□□□□ -0.42
HCG11-201ENST00000411553 PTPRBP23467 1997 aa12.42□□□□□ -0.42
HCG11-201ENST00000411553 PLA2G1BP04054 148 aaKnown RBP12.42□□□□□ -0.42
HCG11-201ENST00000411553 ANKRD11Q6UB99 2663 aaPredicted RBP12.42□□□□□ -0.42
HCG11-201ENST00000411553 TRAV22A0A0B4J277 110 aa12.41□□□□□ -0.42
HCG11-201ENST00000411553 SMCPP49901 116 aaPredicted RBP12.41□□□□□ -0.42
HCG11-201ENST00000411553 Q96NJ1 140 aa12.41□□□□□ -0.42
HCG11-201ENST00000411553 SPAG11AQ6PDA7 123 aa12.4□□□□□ -0.42
HCG11-201ENST00000411553 ATP11AUNQ6ZP68 121 aa12.4□□□□□ -0.42
HCG11-201ENST00000411553 ZNF462Q96JM2 2506 aa12.4□□□□□ -0.42
HCG11-201ENST00000411553 DNAH10OSP0CZ25 163 aa12.4□□□□□ -0.42
HCG11-201ENST00000411553 RPL37AP61513 92 aaKnown RBP12.39□□□□□ -0.43
HCG11-201ENST00000411553 USP9YO00507 2555 aaPredicted RBP12.38□□□□□ -0.43
HCG11-201ENST00000411553 CHD8Q9HCK8 2581 aa12.38□□□□□ -0.43
HCG11-201ENST00000411553 PKD1L2Q7Z442 2459 aa12.37□□□□□ -0.43
HCG11-201ENST00000411553 CEP295Q9C0D2 2601 aa12.37□□□□□ -0.43
HCG11-201ENST00000411553 J3QL48 77 aa12.37□□□□□ -0.43
HCG11-201ENST00000411553 WDR87Q6ZQQ6 2873 aa12.37□□□□□ -0.43
HCG11-201ENST00000411553 COL27A1Q8IZC6 1860 aaPredicted RBP12.35□□□□□ -0.43
HCG11-201ENST00000411553 TRBV7-4A0A0J9YYF1 115 aa12.34□□□□□ -0.43
HCG11-201ENST00000411553 C8orf87E5RJ46 101 aa12.33□□□□□ -0.44
HCG11-201ENST00000411553 VPREB1P12018 145 aa12.33□□□□□ -0.44
HCG11-201ENST00000411553 FAM168BA1KXE4 195 aa12.33□□□□□ -0.44
HCG11-201ENST00000411553 PRO0461Q9UI25 63 aa12.33□□□□□ -0.44
HCG11-201ENST00000411553 KLK9Q2XQG4 91 aa12.31□□□□□ -0.44
HCG11-201ENST00000411553 IGLV6-57P01721 117 aa12.31□□□□□ -0.44
HCG11-201ENST00000411553 LOC101927531A0A1B0GV80 90 aa12.31□□□□□ -0.44
HCG11-201ENST00000411553 A8MWP4 228 aa12.29□□□□□ -0.44
HCG11-201ENST00000411553 TM2D3Q9BRN9 247 aa12.29□□□□□ -0.44
HCG11-201ENST00000411553 IGLV8-61A0A075B6I0 122 aa12.28□□□□□ -0.44
HCG11-201ENST00000411553 SERTAD4-AS1Q5TG53 156 aa12.27□□□□□ -0.45
HCG11-201ENST00000411553 PRO0628Q9UI54 55 aa12.27□□□□□ -0.45
HCG11-201ENST00000411553 IGLV1-50A0A075B6I6 118 aa12.27□□□□□ -0.45
HCG11-201ENST00000411553 MRPL34Q9BQ48 92 aaKnown RBP12.26□□□□□ -0.45
HCG11-201ENST00000411553 LITAFQ99732 161 aa12.25□□□□□ -0.45
HCG11-201ENST00000411553 MTORP42345 2549 aa12.23□□□□□ -0.45
HCG11-201ENST00000411553 CSNK1G2-AS1Q8NCQ2 148 aa12.23□□□□□ -0.45
HCG11-201ENST00000411553 K7EIL1 84 aa12.22□□□□□ -0.45
HCG11-201ENST00000411553 KCNQ1DNQ9H478 68 aa12.22□□□□□ -0.45
HCG11-201ENST00000411553 COX6B2Q6YFQ2 88 aa12.22□□□□□ -0.45
HCG11-201ENST00000411553 KRTAP10-11P60412 298 aa12.21□□□□□ -0.45
HCG11-201ENST00000411553 K7EQZ3 153 aa12.21□□□□□ -0.46
HCG11-201ENST00000411553 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
HCG11-201ENST00000411553 RPS28P62857 69 aaKnown RBP12.18□□□□□ -0.46
HCG11-201ENST00000411553 LINC00304Q8N9R0 145 aa12.17□□□□□ -0.46
HCG11-201ENST00000411553 C4orf26Q17RF5 130 aa12.16□□□□□ -0.46
HCG11-201ENST00000411553 C19orf73Q9NVV2 129 aa12.16□□□□□ -0.46
HCG11-201ENST00000411553 LINC00528Q8N1L1 170 aa12.15□□□□□ -0.46
HCG11-201ENST00000411553 DSCR10P59022 87 aa12.14□□□□□ -0.47
HCG11-201ENST00000411553 IGFL1Q6UW32 110 aa12.14□□□□□ -0.47
HCG11-201ENST00000411553 ZNF861PO60384 105 aa12.13□□□□□ -0.47
HCG11-201ENST00000411553 FASNP49327 2511 aaKnown RBP12.13□□□□□ -0.47
HCG11-201ENST00000411553 ANKRD17O75179 2603 aaKnown RBP12.13□□□□□ -0.47
HCG11-201ENST00000411553 SSBP3-AS1Q7Z2R9 100 aa12.13□□□□□ -0.47
HCG11-201ENST00000411553 LINC01600Q96MT4 127 aa12.13□□□□□ -0.47
HCG11-201ENST00000411553 PRR34Q9NV39 138 aa12.13□□□□□ -0.47
HCG11-201ENST00000411553 C15orf56Q8N910 161 aa12.13□□□□□ -0.47
HCG11-201ENST00000411553 F8P00451 2351 aa12.12□□□□□ -0.47
HCG11-201ENST00000411553 COA5Q86WW8 74 aa12.11□□□□□ -0.47
HCG11-201ENST00000411553 C8orf17Q9NRJ1 99 aa12.11□□□□□ -0.47
HCG11-201ENST00000411553 A0A087WTM6 91 aa12.1□□□□□ -0.47
HCG11-201ENST00000411553 ERC2-IT1O76042 136 aa12.09□□□□□ -0.47
HCG11-201ENST00000411553 SPINT4Q6UDR6 99 aa12.09□□□□□ -0.47
HCG11-201ENST00000411553 POLQO75417 2590 aa12.08□□□□□ -0.48
HCG11-201ENST00000411553 OBSCN-AS1Q96MR7 158 aa12.08□□□□□ -0.48
HCG11-201ENST00000411553 C9orf92A6NGG3 77 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms