RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 IGLV6-57P01721 117 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 SPINK8P0C7L1 97 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 SPRR1AP35321 89 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 BLOC1S1P78537 153 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 S100A12P80511 92 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 COX17Q14061 63 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 MRPL54Q6P161 138 aaKnown RBP1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 Q6Q795 121 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 SLC51BQ86UW2 128 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 KRTAP19-1Q8IUB9 90 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 Q8N8P6 123 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 LIMD2Q9BT23 127 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 MRPL18Q9H0U6 180 aaKnown RBP1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 MAP1LC3AQ9H492 121 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 LINC00846Q9NV44 126 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 ERG28Q9UKR5 140 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 LAMTOR2Q9Y2Q5 125 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 TRAV9-1A0A075B6T8 112 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 A0A1B0GXF2 115 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 PRYO14603 147 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 LINC00158P58513 81 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 RPL37P61927 97 aaKnown RBP1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 RPL23P62829 140 aaKnown RBP1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 ADIRFQ15847 76 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 RGS21Q2M5E4 152 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 C9orf153Q5TBE3 101 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 SFTA2Q6UW10 78 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 ERASQ7Z444 233 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 ATP5L2Q7Z4Y8 100 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 Q8NDZ9 215 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 TOMM6Q96B49 74 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 ZNF625Q96I27 306 aaPredicted RBP1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 SCGB3A1Q96QR1 104 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 KRTAP9-8Q9BYQ0 159 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 KCNQ1DNQ9H478 68 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 NXT2Q9NPJ8 142 aaKnown RBP1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 BATF3Q9NR55 127 aa1.25□□□□□ -2.21
RNU4-53P-201ENST00000410828 IGLV5-39A0A0G2JS06 123 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 TRBV10-3A0A0K0K1G6 114 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 LINC01549A6NIU2 74 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 B5MCH6 92 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 ATP6V1G1O75348 118 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 ERC2-IT1O76042 136 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 SRP19P09132 144 aaKnown RBP1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 JOSD1Q15040 202 aaPredicted RBP1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 PMVKQ15126 192 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 KRTAP6-3Q3LI67 103 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 ALKAL2Q6UX46 152 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 BOD1L2Q8IYS8 172 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 CST9LQ9H4G1 147 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 NAT8Q9UHE5 227 aa1.24□□□□□ -2.21
RNU4-53P-201ENST00000410828 A0A0U1RRA0 63 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 C20orf202A1L168 122 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 C5orf52A6NGY3 159 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 LCE2BO14633 110 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 NCR3O14931 201 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 IGLC3P0DOY3 106 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 ADCYAP1P18509 176 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 KIAA1644Q3SXP7 199 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 SLC25A34Q6PIV7 304 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 HRCT1Q6UXD1 115 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 ATP11AUNQ6ZP68 121 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 Q6ZRX8 168 aa1.23□□□□□ -2.21
RNU4-53P-201ENST00000410828 LINC00587B1AMM8 73 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 H7C2G1 150 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 MT2AP02795 61 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 ZNF22P17026 224 aaPredicted RBP1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 DDTP30046 118 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 HINT1P49773 126 aaPredicted RBP1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 NDUFA6P56556 154 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 CD164Q04900 197 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 KRTAP19-6Q3LI70 58 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 MEIG1Q5JSS6 88 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 TMEM170BQ5T4T1 132 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 Q5XG85 94 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 FA2HQ7L5A8 372 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 MIR7-3HGQ8N6C7 128 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 Q9BRP9 147 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 KRTAP9-3Q9BYQ3 159 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 PRO1933Q9H354 126 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 LAMTOR3Q9UHA4 124 aa1.22□□□□□ -2.21
RNU4-53P-201ENST00000410828 KMT2DO14686 5537 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 TRBV20-1A0A075B6N2 111 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 TRBV10-2A0A0K0K1G8 114 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 C9JQL5 133 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 MT-ND4LP03901 98 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 MT1FP04733 61 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 SMIM13P0DJ93 91 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 SPRR1BP22528 89 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 KRTAP10-10P60014 251 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 HERV-K104P63124 156 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 PEA15Q15121 130 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 S100A7L2Q5SY68 101 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 C10orf91Q5T1B1 145 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 C1orf195Q5TG92 126 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 SMIM29Q86T20 159 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 BAGE3Q86Y29 109 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 TCTE3Q8IZS6 198 aa1.21□□□□□ -2.22
RNU4-53P-201ENST00000410828 ST20-AS1Q8NBB2 130 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms