RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 HIST1H2BDP58876 126 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 HIST1H2BCP62807 126 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.48□□□□□ -2.17
SCN7A-201ENST00000409855 NLRC5Q86WI3 1866 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 SBSPONQ8IVN8 264 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 HIST1H2BHQ93079 126 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 HIST1H2BNQ99877 126 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 HIST1H2BMQ99879 126 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 HELZ2Q9BYK8 2649 aaKnown RBP1.48□□□□□ -2.17
SCN7A-201ENST00000409855 LOC100996750A0A140TA64 210 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 TSHBP01222 138 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 LINC00315P59091 139 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 TEN1Q86WV5 123 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 LINC00304Q8N9R0 145 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 LINC00308Q8TCZ7 52 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 CNFNQ9BYD5 112 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 KRTAP4-6Q9BYQ5 205 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 PPDPFQ9H3Y8 114 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 NCKAP5O14513 1909 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 LCTP09848 1927 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 PTPRDP23468 1912 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 LCE6AA0A183 80 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 CXCL6P80162 114 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 MYH15Q9Y2K3 1946 aa1.48□□□□□ -2.17
SCN7A-201ENST00000409855 IGLV4-60A0A075B6I1 120 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 ZNF22P17026 224 aaPredicted RBP1.47□□□□□ -2.17
SCN7A-201ENST00000409855 LINC00205P59089 165 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 WDR81Q562E7 1941 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 K7EIL1 84 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 PRB2P02812 416 aaPredicted RBP1.47□□□□□ -2.17
SCN7A-201ENST00000409855 ETDBQ3ZM63 59 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 LINC00643Q86TS7 51 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 LINC00476Q8WZB0 136 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 FAM30AQ9NZY2 134 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 MXRA5Q9NR99 2828 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 RNASE13Q5GAN3 156 aaKnown RBP1.47□□□□□ -2.17
SCN7A-201ENST00000409855 WIPF1O43516 503 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 CCKP06307 115 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 NDUFV3P56181 108 aaKnown RBP1.47□□□□□ -2.17
SCN7A-201ENST00000409855 CD164Q04900 197 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 GCN1Q92616 2671 aaKnown RBP1.47□□□□□ -2.17
SCN7A-201ENST00000409855 DOCK4Q8N1I0 1966 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 NSD1Q96L73 2696 aaPredicted RBP1.47□□□□□ -2.17
SCN7A-201ENST00000409855 hDV103S1A0JD37 113 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 IGLV2-14P01704 120 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 PRR4Q16378 134 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 UQCRQO14949 82 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 POLR2KP53803 58 aaKnown RBP1.47□□□□□ -2.17
SCN7A-201ENST00000409855 LINC00313P59037 77 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 FAM229BQ4G0N7 80 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 C5orf47Q569G3 176 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 C9orf116Q5BN46 136 aaPredicted RBP1.47□□□□□ -2.17
SCN7A-201ENST00000409855 TENM3Q9P273 2699 aa1.47□□□□□ -2.17
SCN7A-201ENST00000409855 HERC1Q15751 4861 aa1.46□□□□□ -2.17
SCN7A-201ENST00000409855 MOBPQ13875 183 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 ESRGQ1W209 222 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 SERP2Q8N6R1 65 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 APLNQ9ULZ1 77 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 PLA2G2DQ9UNK4 145 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 COL4A2P08572 1712 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 A0A1W2PPM0 123 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 X6R8D5 127 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 LINC01547P58512 204 aaPredicted RBP1.46□□□□□ -2.18
SCN7A-201ENST00000409855 C18orf65Q6ZTR6 163 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 LINC00528Q8N1L1 170 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 Q8N814 137 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 Q8NAQ8 132 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 CLEC2BQ92478 149 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 C22orf24Q9Y442 160 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 HELZP42694 1942 aaKnown RBP1.46□□□□□ -2.18
SCN7A-201ENST00000409855 SPINK1P00995 79 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 RNASE3P12724 160 aaKnown RBP1.46□□□□□ -2.18
SCN7A-201ENST00000409855 ZNF575Q86XF7 245 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 CYYR1Q96J86 154 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 AGRNO00468 2067 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 AKAP9Q99996 3911 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 IGKV2-28A0A075B6P5 120 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 A0A087WTM6 91 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 IGKV2D-28P01615 120 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 RPL39P62891 51 aaKnown RBP1.46□□□□□ -2.18
SCN7A-201ENST00000409855 Q6Q795 121 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 SMCR5Q8TEV8 140 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 DNAH3Q8TD57 4116 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 PCDH15Q96QU1 1955 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 A0A1B0GV90 55 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 HRES1P13985 223 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 CNBPP62633 177 aaKnown RBP1.46□□□□□ -2.18
SCN7A-201ENST00000409855 C10orf99Q6UWK7 81 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 WFDC10BQ8IUB3 73 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 CDKN2A-AS1Q9UH64 79 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 LINC00588Q9Y4M8 146 aa1.46□□□□□ -2.18
SCN7A-201ENST00000409855 COLCA2A8K830 154 aa1.45□□□□□ -2.18
SCN7A-201ENST00000409855 TLX1NBP0CAT3 122 aa1.45□□□□□ -2.18
SCN7A-201ENST00000409855 COX6A2Q02221 97 aa1.45□□□□□ -2.18
SCN7A-201ENST00000409855 COA6Q5JTJ3 125 aaKnown RBP1.45□□□□□ -2.18
SCN7A-201ENST00000409855 CASC10Q5T4H9 136 aa1.45□□□□□ -2.18
SCN7A-201ENST00000409855 Q6ZRU5 148 aa1.45□□□□□ -2.18
SCN7A-201ENST00000409855 Q6ZS46 218 aa1.45□□□□□ -2.18
SCN7A-201ENST00000409855 DENND4AQ7Z401 1863 aa1.45□□□□□ -2.18
SCN7A-201ENST00000409855 LYSTQ99698 3801 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms