RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 Q8NDZ9 215 aa8.05□□□□□ -1.12
PMS1-204ENST00000409823 DPH3Q96FX2 82 aa8.05□□□□□ -1.12
PMS1-204ENST00000409823 PGPEP1Q9NXJ5 209 aa8.05□□□□□ -1.12
PMS1-204ENST00000409823 A0A1B0GVY2 172 aa8.05□□□□□ -1.12
PMS1-204ENST00000409823 PTTG1IPP53801 180 aa8.05□□□□□ -1.12
PMS1-204ENST00000409823 SPANXDQ9BXN6 97 aa8.05□□□□□ -1.12
PMS1-204ENST00000409823 SPANXB1Q9NS25 103 aaPredicted RBP8.05□□□□□ -1.12
PMS1-204ENST00000409823 SPANXCQ9NY87 97 aa8.05□□□□□ -1.12
PMS1-204ENST00000409823 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.05□□□□□ -1.12
PMS1-204ENST00000409823 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
PMS1-204ENST00000409823 HINT1P49773 126 aaPredicted RBP8.04□□□□□ -1.12
PMS1-204ENST00000409823 HAMPP81172 84 aa8.04□□□□□ -1.12
PMS1-204ENST00000409823 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
PMS1-204ENST00000409823 KRTAP10-1P60331 282 aa8.03□□□□□ -1.12
PMS1-204ENST00000409823 FXYD2P54710 66 aa8.02□□□□□ -1.13
PMS1-204ENST00000409823 CEND1Q8N111 149 aa8.02□□□□□ -1.13
PMS1-204ENST00000409823 HSD52Q0P140 79 aa8.02□□□□□ -1.13
PMS1-204ENST00000409823 BATFQ16520 125 aa8.02□□□□□ -1.13
PMS1-204ENST00000409823 SERTAD4-AS1Q5TG53 156 aa8.02□□□□□ -1.13
PMS1-204ENST00000409823 FAM19A5Q7Z5A7 132 aaPredicted RBP8.02□□□□□ -1.13
PMS1-204ENST00000409823 FAM30AQ9NZY2 134 aa8.02□□□□□ -1.13
PMS1-204ENST00000409823 A4D1N5 150 aa8.01□□□□□ -1.13
PMS1-204ENST00000409823 A0A1W2PNN7 141 aa8□□□□□ -1.13
PMS1-204ENST00000409823 Q6ZVH6 145 aa8□□□□□ -1.13
PMS1-204ENST00000409823 NCR3O14931 201 aa8□□□□□ -1.13
PMS1-204ENST00000409823 KRTAP7-1Q8IUC3 87 aa8□□□□□ -1.13
PMS1-204ENST00000409823 IFITM1P13164 125 aa7.99□□□□□ -1.13
PMS1-204ENST00000409823 GAGE10A6NGK3 116 aa7.99□□□□□ -1.13
PMS1-204ENST00000409823 RPL24P83731 157 aaKnown RBP7.99□□□□□ -1.13
PMS1-204ENST00000409823 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
PMS1-204ENST00000409823 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
PMS1-204ENST00000409823 K7ERJ3 54 aa7.98□□□□□ -1.13
PMS1-204ENST00000409823 TAL2Q16559 108 aa7.98□□□□□ -1.13
PMS1-204ENST00000409823 IGKV2-28A0A075B6P5 120 aa7.97□□□□□ -1.13
PMS1-204ENST00000409823 A0A087WYN8 130 aa7.97□□□□□ -1.13
PMS1-204ENST00000409823 IGKV2D-28P01615 120 aa7.97□□□□□ -1.13
PMS1-204ENST00000409823 NHP2Q9NX24 153 aaKnown RBP7.97□□□□□ -1.13
PMS1-204ENST00000409823 APOBP04114 4563 aaKnown RBP7.97□□□□□ -1.13
PMS1-204ENST00000409823 VPREB1P12018 145 aa7.97□□□□□ -1.13
PMS1-204ENST00000409823 LOC107984156A0A0G2JMH3 177 aa7.96□□□□□ -1.13
PMS1-204ENST00000409823 ARL17AQ8IVW1 177 aa7.96□□□□□ -1.13
PMS1-204ENST00000409823 COPS9Q8WXC6 57 aa7.96□□□□□ -1.14
PMS1-204ENST00000409823 LINC00474Q9P2X8 69 aa7.96□□□□□ -1.14
PMS1-204ENST00000409823 CFC1BP0CG36 223 aa7.95□□□□□ -1.14
PMS1-204ENST00000409823 CFC1P0CG37 223 aa7.95□□□□□ -1.14
PMS1-204ENST00000409823 LINC00337Q8N6G1 96 aa7.95□□□□□ -1.14
PMS1-204ENST00000409823 NKAPP1Q8N9T2 125 aa7.95□□□□□ -1.14
PMS1-204ENST00000409823 OR13C6PQ8NH95 151 aa7.95□□□□□ -1.14
PMS1-204ENST00000409823 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
PMS1-204ENST00000409823 A6NDN8 102 aa7.94□□□□□ -1.14
PMS1-204ENST00000409823 RPL37AP8A6NKH3 93 aa7.94□□□□□ -1.14
PMS1-204ENST00000409823 H7C2G1 150 aa7.94□□□□□ -1.14
PMS1-204ENST00000409823 M0QXV9 152 aa7.94□□□□□ -1.14
PMS1-204ENST00000409823 PHF5AQ7RTV0 110 aaKnown RBP7.94□□□□□ -1.14
PMS1-204ENST00000409823 PKIGQ9Y2B9 76 aa7.94□□□□□ -1.14
PMS1-204ENST00000409823 M0R143 59 aa7.93□□□□□ -1.14
PMS1-204ENST00000409823 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
PMS1-204ENST00000409823 SNHG12Q9BXW3 62 aa7.93□□□□□ -1.14
PMS1-204ENST00000409823 SCXQ7RTU7 201 aa7.93□□□□□ -1.14
PMS1-204ENST00000409823 TMEM238LA0A1B0GVL6 79 aa7.93□□□□□ -1.14
PMS1-204ENST00000409823 A6NJY4 79 aa7.93□□□□□ -1.14
PMS1-204ENST00000409823 FAT1Q14517 4588 aa7.92□□□□□ -1.14
PMS1-204ENST00000409823 NDUFC2O95298 119 aa7.92□□□□□ -1.14
PMS1-204ENST00000409823 C7orf33Q8WU49 177 aa7.92□□□□□ -1.14
PMS1-204ENST00000409823 RAB37Q96AX2 223 aa7.92□□□□□ -1.14
PMS1-204ENST00000409823 S100A7L2Q5SY68 101 aa7.92□□□□□ -1.14
PMS1-204ENST00000409823 Q6ZSA8 131 aa7.92□□□□□ -1.14
PMS1-204ENST00000409823 MRPL55Q7Z7F7 128 aaKnown RBP7.92□□□□□ -1.14
PMS1-204ENST00000409823 SRRM2Q9UQ35 2752 aaKnown RBP7.91□□□□□ -1.14
PMS1-204ENST00000409823 LINC00167Q96N53 147 aa7.91□□□□□ -1.14
PMS1-204ENST00000409823 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
PMS1-204ENST00000409823 PLA2G2DQ9UNK4 145 aa7.91□□□□□ -1.14
PMS1-204ENST00000409823 KRTAP11-1Q8IUC1 163 aa7.9□□□□□ -1.15
PMS1-204ENST00000409823 M0R378 163 aa7.89□□□□□ -1.15
PMS1-204ENST00000409823 RPL13AP40429 203 aaKnown RBP7.89□□□□□ -1.15
PMS1-204ENST00000409823 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
PMS1-204ENST00000409823 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
PMS1-204ENST00000409823 PLAC8Q9NZF1 115 aa7.89□□□□□ -1.15
PMS1-204ENST00000409823 UBE2BP63146 152 aa7.88□□□□□ -1.15
PMS1-204ENST00000409823 NAA38Q9BRA0 125 aaKnown RBP7.88□□□□□ -1.15
PMS1-204ENST00000409823 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
PMS1-204ENST00000409823 PRO1854Q9UHT4 67 aa7.88□□□□□ -1.15
PMS1-204ENST00000409823 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
PMS1-204ENST00000409823 A0A0B4J2C4 111 aa7.88□□□□□ -1.15
PMS1-204ENST00000409823 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
PMS1-204ENST00000409823 TRBV10-2A0A0K0K1G8 114 aa7.87□□□□□ -1.15
PMS1-204ENST00000409823 Q1RN00 199 aa7.87□□□□□ -1.15
PMS1-204ENST00000409823 IGLV6-57P01721 117 aa7.87□□□□□ -1.15
PMS1-204ENST00000409823 XGP55808 180 aa7.87□□□□□ -1.15
PMS1-204ENST00000409823 HSPG2P98160 4391 aa7.87□□□□□ -1.15
PMS1-204ENST00000409823 A0A1B0GWB2 263 aa7.86□□□□□ -1.15
PMS1-204ENST00000409823 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
PMS1-204ENST00000409823 IGLV1-50A0A075B6I6 118 aa7.86□□□□□ -1.15
PMS1-204ENST00000409823 SMR3BP02814 79 aaPredicted RBP7.86□□□□□ -1.15
PMS1-204ENST00000409823 SMIM11BQ8TCY0 68 aa7.85□□□□□ -1.15
PMS1-204ENST00000409823 LBHQ53QV2 105 aaPredicted RBP7.84□□□□□ -1.15
PMS1-204ENST00000409823 TSPAN13O95857 204 aa7.84□□□□□ -1.15
PMS1-204ENST00000409823 TRAV23DV6A0A075B6W5 121 aa7.83□□□□□ -1.16
PMS1-204ENST00000409823 EPM2AB3EWF7 344 aa7.83□□□□□ -1.16
PMS1-204ENST00000409823 C6orf99Q4VX62 202 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms