RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 PRR3P79522 188 aaKnown RBP8.11□□□□□ -1.11
CHMP3-204ENST00000409727 RPL18AQ02543 176 aaKnown RBP8.11□□□□□ -1.11
CHMP3-204ENST00000409727 Q1RN00 199 aa8.11□□□□□ -1.11
CHMP3-204ENST00000409727 LRCOL1A6NCL2 159 aa8.11□□□□□ -1.11
CHMP3-204ENST00000409727 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
CHMP3-204ENST00000409727 Q6ZRP5 223 aa8.11□□□□□ -1.11
CHMP3-204ENST00000409727 IGKV2-28A0A075B6P5 120 aa8.1□□□□□ -1.11
CHMP3-204ENST00000409727 IGKV2D-28P01615 120 aa8.1□□□□□ -1.11
CHMP3-204ENST00000409727 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
CHMP3-204ENST00000409727 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
CHMP3-204ENST00000409727 C14orf177Q52M58 125 aa8.09□□□□□ -1.11
CHMP3-204ENST00000409727 Q8NDZ9 215 aa8.09□□□□□ -1.11
CHMP3-204ENST00000409727 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.11
CHMP3-204ENST00000409727 KMT2AQ03164 3969 aa8.09□□□□□ -1.11
CHMP3-204ENST00000409727 NCR3O14931 201 aa8.09□□□□□ -1.12
CHMP3-204ENST00000409727 VAMP3Q15836 100 aa8.09□□□□□ -1.12
CHMP3-204ENST00000409727 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.12
CHMP3-204ENST00000409727 LINC00337Q8N6G1 96 aa8.08□□□□□ -1.12
CHMP3-204ENST00000409727 VPS13DQ5THJ4 4388 aa8.08□□□□□ -1.12
CHMP3-204ENST00000409727 LOC107984156A0A0G2JMH3 177 aa8.07□□□□□ -1.12
CHMP3-204ENST00000409727 A0A1W2PPM0 123 aa8.07□□□□□ -1.12
CHMP3-204ENST00000409727 PSMB2P49721 201 aa8.07□□□□□ -1.12
CHMP3-204ENST00000409727 GAGE2BQ13066 116 aa8.07□□□□□ -1.12
CHMP3-204ENST00000409727 ARL17AQ8IVW1 177 aa8.07□□□□□ -1.12
CHMP3-204ENST00000409727 OR13C6PQ8NH95 151 aa8.07□□□□□ -1.12
CHMP3-204ENST00000409727 A0A087WTM6 91 aa8.06□□□□□ -1.12
CHMP3-204ENST00000409727 FABP2P12104 132 aa8.06□□□□□ -1.12
CHMP3-204ENST00000409727 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
CHMP3-204ENST00000409727 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
CHMP3-204ENST00000409727 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
CHMP3-204ENST00000409727 LINC01620Q4KN68 170 aa8.06□□□□□ -1.12
CHMP3-204ENST00000409727 Q8N814 137 aa8.06□□□□□ -1.12
CHMP3-204ENST00000409727 TRAV13-2A0A0B4J235 113 aa8.05□□□□□ -1.12
CHMP3-204ENST00000409727 C9orf129Q5T035 196 aaKnown RBP8.05□□□□□ -1.12
CHMP3-204ENST00000409727 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
CHMP3-204ENST00000409727 LOC107984640A0A0U1RRK4 108 aa8.04□□□□□ -1.12
CHMP3-204ENST00000409727 NDUFC2O95298 119 aa8.04□□□□□ -1.12
CHMP3-204ENST00000409727 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
CHMP3-204ENST00000409727 TRIAP1O43715 76 aa8.03□□□□□ -1.12
CHMP3-204ENST00000409727 SPCS1Q9Y6A9 102 aa8.03□□□□□ -1.12
CHMP3-204ENST00000409727 IGKV2-24A0A0C4DH68 120 aa8.02□□□□□ -1.12
CHMP3-204ENST00000409727 FAM168BA1KXE4 195 aa8.02□□□□□ -1.13
CHMP3-204ENST00000409727 S100A7L2Q5SY68 101 aa8.02□□□□□ -1.13
CHMP3-204ENST00000409727 A0A096LNI7 61 aa8.01□□□□□ -1.13
CHMP3-204ENST00000409727 GAGE10A6NGK3 116 aa8.01□□□□□ -1.13
CHMP3-204ENST00000409727 VPREB1P12018 145 aa8.01□□□□□ -1.13
CHMP3-204ENST00000409727 SERTAD4-AS1Q5TG53 156 aa8.01□□□□□ -1.13
CHMP3-204ENST00000409727 SMIM11BQ8TCY0 68 aa8□□□□□ -1.13
CHMP3-204ENST00000409727 K7EP34 96 aa8□□□□□ -1.13
CHMP3-204ENST00000409727 RTL8CO15255 209 aa7.99□□□□□ -1.13
CHMP3-204ENST00000409727 FAM19A5Q7Z5A7 132 aaPredicted RBP7.99□□□□□ -1.13
CHMP3-204ENST00000409727 C9orf163Q8N9P6 203 aa7.99□□□□□ -1.13
CHMP3-204ENST00000409727 ALMS1Q8TCU4 4167 aa7.99□□□□□ -1.13
CHMP3-204ENST00000409727 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 GTF2H5Q6ZYL4 71 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 NKAPP1Q8N9T2 125 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 TMEM126AQ9H061 195 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 LCE6AA0A183 80 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 C16orf90A8MZG2 172 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 TCL1BO95988 128 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 COX6CP09669 75 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 LYRM7Q5U5X0 104 aa7.98□□□□□ -1.13
CHMP3-204ENST00000409727 TRBV10-3A0A0K0K1G6 114 aa7.97□□□□□ -1.13
CHMP3-204ENST00000409727 TRBV10-2A0A0K0K1G8 114 aa7.97□□□□□ -1.13
CHMP3-204ENST00000409727 H3BMG7 143 aa7.97□□□□□ -1.13
CHMP3-204ENST00000409727 UBE2V1Q13404 147 aa7.97□□□□□ -1.13
CHMP3-204ENST00000409727 CLEC2BQ92478 149 aa7.97□□□□□ -1.13
CHMP3-204ENST00000409727 RPL28P46779 137 aaKnown RBP7.96□□□□□ -1.13
CHMP3-204ENST00000409727 M0R378 163 aa7.96□□□□□ -1.14
CHMP3-204ENST00000409727 SDIM1Q6ZPB5 146 aa7.96□□□□□ -1.14
CHMP3-204ENST00000409727 KRTAP7-1Q8IUC3 87 aa7.96□□□□□ -1.14
CHMP3-204ENST00000409727 MTURNQ8N3F0 131 aa7.96□□□□□ -1.14
CHMP3-204ENST00000409727 IGLV5-52A0A0A0MRZ9 124 aa7.95□□□□□ -1.14
CHMP3-204ENST00000409727 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
CHMP3-204ENST00000409727 HYDINQ4G0P3 5121 aa7.95□□□□□ -1.14
CHMP3-204ENST00000409727 C7orf33Q8WU49 177 aa7.94□□□□□ -1.14
CHMP3-204ENST00000409727 DNAH2Q9P225 4427 aa7.94□□□□□ -1.14
CHMP3-204ENST00000409727 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
CHMP3-204ENST00000409727 RPL37AP8A6NKH3 93 aa7.94□□□□□ -1.14
CHMP3-204ENST00000409727 DPH3Q96FX2 82 aa7.94□□□□□ -1.14
CHMP3-204ENST00000409727 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
CHMP3-204ENST00000409727 C22orf24Q9Y442 160 aa7.94□□□□□ -1.14
CHMP3-204ENST00000409727 TRBV20-1A0A075B6N2 111 aa7.93□□□□□ -1.14
CHMP3-204ENST00000409727 TRAV23DV6A0A075B6W5 121 aa7.93□□□□□ -1.14
CHMP3-204ENST00000409727 PANO1I0J062 215 aa7.93□□□□□ -1.14
CHMP3-204ENST00000409727 C6orf99Q4VX62 202 aa7.93□□□□□ -1.14
CHMP3-204ENST00000409727 KRTAP10-2P60368 255 aa7.92□□□□□ -1.14
CHMP3-204ENST00000409727 ATXN8Q156A1 80 aa7.92□□□□□ -1.14
CHMP3-204ENST00000409727 MRPL55Q7Z7F7 128 aaKnown RBP7.92□□□□□ -1.14
CHMP3-204ENST00000409727 FAM218AQ96MZ4 157 aa7.92□□□□□ -1.14
CHMP3-204ENST00000409727 PKIGQ9Y2B9 76 aa7.92□□□□□ -1.14
CHMP3-204ENST00000409727 M0QXV9 152 aa7.91□□□□□ -1.14
CHMP3-204ENST00000409727 LINC00167Q96N53 147 aa7.91□□□□□ -1.14
CHMP3-204ENST00000409727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
CHMP3-204ENST00000409727 DNAH6Q9C0G6 4158 aa7.9□□□□□ -1.14
CHMP3-204ENST00000409727 IGLV5-37A0A075B6J1 123 aa7.9□□□□□ -1.14
CHMP3-204ENST00000409727 LST1O00453 97 aa7.89□□□□□ -1.15
CHMP3-204ENST00000409727 ZNF73O43830 326 aaPredicted RBP7.89□□□□□ -1.15
CHMP3-204ENST00000409727 LINC00474Q9P2X8 69 aa7.89□□□□□ -1.15
CHMP3-204ENST00000409727 A0A087WYN8 130 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms