RNA–Protein interactions for RNA: ENST00000409633.5

UBE2F-203, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 837 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-203ENST00000409633 HIST1H2BNQ99877 126 aa11.85□□□□□ -0.51
UBE2F-203ENST00000409633 HIST1H2BMQ99879 126 aa11.85□□□□□ -0.51
UBE2F-203ENST00000409633 IGKV2-28A0A075B6P5 120 aa11.84□□□□□ -0.51
UBE2F-203ENST00000409633 IGKV2D-28P01615 120 aa11.84□□□□□ -0.51
UBE2F-203ENST00000409633 TSPEAR-AS2P59090 65 aa11.84□□□□□ -0.51
UBE2F-203ENST00000409633 HSPB8Q9UJY1 196 aa11.84□□□□□ -0.51
UBE2F-203ENST00000409633 ZNF861PO60384 105 aa11.83□□□□□ -0.52
UBE2F-203ENST00000409633 KRTAP1-4P0C5Y4 121 aa11.83□□□□□ -0.52
UBE2F-203ENST00000409633 SMIM13P0DJ93 91 aa11.83□□□□□ -0.52
UBE2F-203ENST00000409633 COX17Q14061 63 aa11.83□□□□□ -0.52
UBE2F-203ENST00000409633 BCE1O60756 84 aa11.82□□□□□ -0.52
UBE2F-203ENST00000409633 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
UBE2F-203ENST00000409633 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
UBE2F-203ENST00000409633 SFTA2Q6UW10 78 aa11.8□□□□□ -0.52
UBE2F-203ENST00000409633 TMEM238C9JI98 176 aa11.79□□□□□ -0.52
UBE2F-203ENST00000409633 DPM2O94777 84 aa11.79□□□□□ -0.52
UBE2F-203ENST00000409633 LEPROTO15243 131 aa11.77□□□□□ -0.53
UBE2F-203ENST00000409633 IGKCP01834 107 aa11.77□□□□□ -0.53
UBE2F-203ENST00000409633 PLNP26678 52 aa11.77□□□□□ -0.53
UBE2F-203ENST00000409633 RPL24P83731 157 aaKnown RBP11.77□□□□□ -0.53
UBE2F-203ENST00000409633 MIR7-3HGQ8N6C7 128 aa11.77□□□□□ -0.53
UBE2F-203ENST00000409633 IGLV1-50A0A075B6I6 118 aa11.76□□□□□ -0.53
UBE2F-203ENST00000409633 MAP1LC3CQ9BXW4 147 aa11.76□□□□□ -0.53
UBE2F-203ENST00000409633 MYMXA0A1B0GTQ4 84 aa11.75□□□□□ -0.53
UBE2F-203ENST00000409633 ATP6V1G1O75348 118 aa11.75□□□□□ -0.53
UBE2F-203ENST00000409633 RPL28P46779 137 aaKnown RBP11.75□□□□□ -0.53
UBE2F-203ENST00000409633 DAND5Q8N907 189 aa11.75□□□□□ -0.53
UBE2F-203ENST00000409633 J3QQQ9 107 aa11.74□□□□□ -0.53
UBE2F-203ENST00000409633 UBE2AP49459 152 aa11.74□□□□□ -0.53
UBE2F-203ENST00000409633 HERV-K104P63124 156 aa11.74□□□□□ -0.53
UBE2F-203ENST00000409633 PRLHP81277 87 aa11.74□□□□□ -0.53
UBE2F-203ENST00000409633 PLEKHB2Q96CS7 222 aa11.74□□□□□ -0.53
UBE2F-203ENST00000409633 KRTAP13-1Q8IUC0 172 aa11.73□□□□□ -0.53
UBE2F-203ENST00000409633 BOD1L2Q8IYS8 172 aa11.73□□□□□ -0.53
UBE2F-203ENST00000409633 ANAPC11Q9NYG5 84 aa11.73□□□□□ -0.53
UBE2F-203ENST00000409633 SYS1-DBNDD2H3BUS1 97 aa11.72□□□□□ -0.53
UBE2F-203ENST00000409633 M0R378 163 aa11.72□□□□□ -0.53
UBE2F-203ENST00000409633 NCR3O14931 201 aa11.72□□□□□ -0.53
UBE2F-203ENST00000409633 TMEM126AQ9H061 195 aa11.72□□□□□ -0.53
UBE2F-203ENST00000409633 HERVK_113P61574 105 aa11.71□□□□□ -0.53
UBE2F-203ENST00000409633 FAM19A1Q7Z5A9 133 aa11.71□□□□□ -0.53
UBE2F-203ENST00000409633 LGALS3P17931 250 aaKnown RBP11.7□□□□□ -0.54
UBE2F-203ENST00000409633 A0A087X002 238 aa11.68□□□□□ -0.54
UBE2F-203ENST00000409633 C3orf79P0CE67 100 aa11.66□□□□□ -0.54
UBE2F-203ENST00000409633 LINC01545Q5VT33 79 aa11.65□□□□□ -0.54
UBE2F-203ENST00000409633 LINC00587B1AMM8 73 aa11.64□□□□□ -0.55
UBE2F-203ENST00000409633 E9PLD3 99 aa11.64□□□□□ -0.55
UBE2F-203ENST00000409633 KRTDAPP60985 99 aa11.64□□□□□ -0.55
UBE2F-203ENST00000409633 NPC2P61916 151 aa11.64□□□□□ -0.55
UBE2F-203ENST00000409633 COA6Q5JTJ3 125 aaKnown RBP11.64□□□□□ -0.55
UBE2F-203ENST00000409633 NMUP48645 174 aa11.63□□□□□ -0.55
UBE2F-203ENST00000409633 ADAMTSL4-AS1Q5T5F5 129 aa11.63□□□□□ -0.55
UBE2F-203ENST00000409633 PET117Q6UWS5 81 aa11.63□□□□□ -0.55
UBE2F-203ENST00000409633 A0A0J9YXY3 114 aa11.62□□□□□ -0.55
UBE2F-203ENST00000409633 TRBV10-3A0A0K0K1G6 114 aa11.62□□□□□ -0.55
UBE2F-203ENST00000409633 EIF4EBP3O60516 100 aaPredicted RBP11.62□□□□□ -0.55
UBE2F-203ENST00000409633 TTTY13Q9BZ97 58 aa11.62□□□□□ -0.55
UBE2F-203ENST00000409633 RPL13AP40429 203 aaKnown RBP11.61□□□□□ -0.55
UBE2F-203ENST00000409633 SOSTDC1Q6X4U4 206 aa11.61□□□□□ -0.55
UBE2F-203ENST00000409633 HIGD2AQ9BW72 106 aa11.61□□□□□ -0.55
UBE2F-203ENST00000409633 IGKV2D-26A0A0A0MRZ7 120 aa11.6□□□□□ -0.55
UBE2F-203ENST00000409633 KRTAP13-2Q52LG2 175 aa11.6□□□□□ -0.55
UBE2F-203ENST00000409633 CRYGAP11844 174 aa11.59□□□□□ -0.55
UBE2F-203ENST00000409633 UBR4Q5T4S7 5183 aa11.58□□□□□ -0.56
UBE2F-203ENST00000409633 TSPAN13O95857 204 aa11.58□□□□□ -0.56
UBE2F-203ENST00000409633 LOC107984156A0A0G2JMH3 177 aa11.57□□□□□ -0.56
UBE2F-203ENST00000409633 PRYO14603 147 aa11.57□□□□□ -0.56
UBE2F-203ENST00000409633 ARL17AQ8IVW1 177 aa11.57□□□□□ -0.56
UBE2F-203ENST00000409633 TYMSOSQ8TAI1 123 aa11.57□□□□□ -0.56
UBE2F-203ENST00000409633 ATOH7Q8N100 152 aa11.56□□□□□ -0.56
UBE2F-203ENST00000409633 MIEN1Q9BRT3 115 aa11.56□□□□□ -0.56
UBE2F-203ENST00000409633 KCNQ1DNQ9H478 68 aa11.56□□□□□ -0.56
UBE2F-203ENST00000409633 SPRR1AP35321 89 aa11.54□□□□□ -0.56
UBE2F-203ENST00000409633 LITAFQ99732 161 aa11.54□□□□□ -0.56
UBE2F-203ENST00000409633 ZNF815PA8K554 130 aa11.53□□□□□ -0.56
UBE2F-203ENST00000409633 KRTAP4-16G5E9R7 235 aaPredicted RBP11.53□□□□□ -0.56
UBE2F-203ENST00000409633 DDTP30046 118 aa11.53□□□□□ -0.56
UBE2F-203ENST00000409633 ETDCA0A1B0GVM5 59 aa11.52□□□□□ -0.57
UBE2F-203ENST00000409633 S100A1P23297 94 aa11.52□□□□□ -0.57
UBE2F-203ENST00000409633 ANKRD39Q53RE8 183 aa11.52□□□□□ -0.57
UBE2F-203ENST00000409633 C3orf22Q8N5N4 141 aa11.51□□□□□ -0.57
UBE2F-203ENST00000409633 SPANXB1Q9NS25 103 aaPredicted RBP11.51□□□□□ -0.57
UBE2F-203ENST00000409633 TRBV10-2A0A0K0K1G8 114 aa11.5□□□□□ -0.57
UBE2F-203ENST00000409633 FAM229BQ4G0N7 80 aa11.5□□□□□ -0.57
UBE2F-203ENST00000409633 LINC00337Q8N6G1 96 aa11.5□□□□□ -0.57
UBE2F-203ENST00000409633 SMCR5Q8TEV8 140 aa11.5□□□□□ -0.57
UBE2F-203ENST00000409633 SPRR4Q96PI1 79 aa11.5□□□□□ -0.57
UBE2F-203ENST00000409633 LRP2P98164 4655 aa11.49□□□□□ -0.57
UBE2F-203ENST00000409633 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
UBE2F-203ENST00000409633 LINC00308Q8TCZ7 52 aa11.49□□□□□ -0.57
UBE2F-203ENST00000409633 C20orf202A1L168 122 aa11.48□□□□□ -0.57
UBE2F-203ENST00000409633 NDUFC2O95298 119 aa11.48□□□□□ -0.57
UBE2F-203ENST00000409633 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
UBE2F-203ENST00000409633 PPDPFQ9H3Y8 114 aa11.48□□□□□ -0.57
UBE2F-203ENST00000409633 B5MCH6 92 aa11.47□□□□□ -0.57
UBE2F-203ENST00000409633 ERC2-IT1O76042 136 aa11.47□□□□□ -0.57
UBE2F-203ENST00000409633 IGLV6-57P01721 117 aa11.47□□□□□ -0.57
UBE2F-203ENST00000409633 PRR4Q16378 134 aa11.47□□□□□ -0.57
UBE2F-203ENST00000409633 TIMM17BO60830 172 aa11.45□□□□□ -0.58
UBE2F-203ENST00000409633 S100A12P80511 92 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms