RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 TRIAP1O43715 76 aa7.75□□□□□ -1.17
SNX13-202ENST00000409604 LINC01556Q5JQF7 62 aa7.75□□□□□ -1.17
SNX13-202ENST00000409604 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
SNX13-202ENST00000409604 TCL1BO95988 128 aa7.75□□□□□ -1.17
SNX13-202ENST00000409604 GHRHP01286 108 aa7.74□□□□□ -1.17
SNX13-202ENST00000409604 COX7BP24311 80 aa7.74□□□□□ -1.17
SNX13-202ENST00000409604 ORMDL1Q9P0S3 153 aa7.74□□□□□ -1.17
SNX13-202ENST00000409604 TRBV10-3A0A0K0K1G6 114 aa7.73□□□□□ -1.17
SNX13-202ENST00000409604 M0QXV9 152 aa7.73□□□□□ -1.17
SNX13-202ENST00000409604 CASC10Q5T4H9 136 aa7.73□□□□□ -1.17
SNX13-202ENST00000409604 HRCT1Q6UXD1 115 aa7.73□□□□□ -1.17
SNX13-202ENST00000409604 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
SNX13-202ENST00000409604 NBDYA0A0U1RRE5 68 aa7.73□□□□□ -1.17
SNX13-202ENST00000409604 CBY1Q9Y3M2 126 aa7.73□□□□□ -1.17
SNX13-202ENST00000409604 LOC107984640A0A0U1RRK4 108 aa7.72□□□□□ -1.17
SNX13-202ENST00000409604 SMIM11BQ8TCY0 68 aa7.72□□□□□ -1.17
SNX13-202ENST00000409604 TENM2Q9NT68 2774 aa7.71□□□□□ -1.17
SNX13-202ENST00000409604 Q6ZQY7 126 aa7.71□□□□□ -1.17
SNX13-202ENST00000409604 DMBT1Q9UGM3 2413 aaPredicted RBP7.71□□□□□ -1.18
SNX13-202ENST00000409604 hADV29S1A0JD25 119 aa7.71□□□□□ -1.18
SNX13-202ENST00000409604 TRAV23DV6A0A075B6W5 121 aa7.7□□□□□ -1.18
SNX13-202ENST00000409604 ANKRD29Q8N6D5 301 aa7.7□□□□□ -1.18
SNX13-202ENST00000409604 C14orf132Q9NPU4 83 aa7.7□□□□□ -1.18
SNX13-202ENST00000409604 H0YGX0 51 aa7.69□□□□□ -1.18
SNX13-202ENST00000409604 CDK2AP2O75956 126 aa7.69□□□□□ -1.18
SNX13-202ENST00000409604 C6orf48Q9UBA6 75 aa7.69□□□□□ -1.18
SNX13-202ENST00000409604 PRLHP81277 87 aa7.69□□□□□ -1.18
SNX13-202ENST00000409604 NDUFC2-KCTD14E9PQ53 114 aa7.68□□□□□ -1.18
SNX13-202ENST00000409604 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
SNX13-202ENST00000409604 IGLV9-49A0A0B4J1Y8 123 aa7.68□□□□□ -1.18
SNX13-202ENST00000409604 C7orf33Q8WU49 177 aa7.67□□□□□ -1.18
SNX13-202ENST00000409604 SPANXDQ9BXN6 97 aa7.67□□□□□ -1.18
SNX13-202ENST00000409604 EIF4EBP3O60516 100 aaPredicted RBP7.66□□□□□ -1.18
SNX13-202ENST00000409604 TEX49A0A1B0GTD5 131 aa7.66□□□□□ -1.18
SNX13-202ENST00000409604 ZNF73O43830 326 aaPredicted RBP7.66□□□□□ -1.18
SNX13-202ENST00000409604 TRRAPQ9Y4A5 3859 aa7.66□□□□□ -1.18
SNX13-202ENST00000409604 M0R378 163 aa7.66□□□□□ -1.18
SNX13-202ENST00000409604 F8W1H4 67 aa7.65□□□□□ -1.18
SNX13-202ENST00000409604 A0A0B4J2C4 111 aa7.65□□□□□ -1.18
SNX13-202ENST00000409604 LINC00337Q8N6G1 96 aa7.65□□□□□ -1.18
SNX13-202ENST00000409604 FAM168BA1KXE4 195 aa7.65□□□□□ -1.19
SNX13-202ENST00000409604 IGKV3D-7A0A0C4DH55 119 aa7.64□□□□□ -1.19
SNX13-202ENST00000409604 C1orf137Q5JT78 98 aa7.64□□□□□ -1.19
SNX13-202ENST00000409604 SOSTDC1Q6X4U4 206 aa7.64□□□□□ -1.19
SNX13-202ENST00000409604 PPDPFLQ8WWR9 84 aa7.64□□□□□ -1.19
SNX13-202ENST00000409604 H3BNG1 76 aa7.64□□□□□ -1.19
SNX13-202ENST00000409604 SPINK6Q6UWN8 80 aa7.64□□□□□ -1.19
SNX13-202ENST00000409604 SCXQ7RTU7 201 aa7.64□□□□□ -1.19
SNX13-202ENST00000409604 TRACP01848 142 aa7.63□□□□□ -1.19
SNX13-202ENST00000409604 INAFM2P0DMQ5 153 aa7.63□□□□□ -1.19
SNX13-202ENST00000409604 C3orf84H3BNL1 204 aa7.63□□□□□ -1.19
SNX13-202ENST00000409604 LINC00612Q8N6U2 182 aa7.63□□□□□ -1.19
SNX13-202ENST00000409604 TRBV30A0A0K0K1B3 111 aa7.63□□□□□ -1.19
SNX13-202ENST00000409604 IGLV5-39A0A0G2JS06 123 aa7.62□□□□□ -1.19
SNX13-202ENST00000409604 C4orf48Q5BLP8 95 aa7.62□□□□□ -1.19
SNX13-202ENST00000409604 PHF5AQ7RTV0 110 aaKnown RBP7.62□□□□□ -1.19
SNX13-202ENST00000409604 C22orf24Q9Y442 160 aa7.62□□□□□ -1.19
SNX13-202ENST00000409604 SMR3BP02814 79 aaPredicted RBP7.61□□□□□ -1.19
SNX13-202ENST00000409604 UBL5Q9BZL1 73 aa7.61□□□□□ -1.19
SNX13-202ENST00000409604 RBM3P98179 157 aaKnown RBP7.61□□□□□ -1.19
SNX13-202ENST00000409604 PKIGQ9Y2B9 76 aa7.61□□□□□ -1.19
SNX13-202ENST00000409604 C16orf90A8MZG2 172 aa7.61□□□□□ -1.19
SNX13-202ENST00000409604 TIMM17BO60830 172 aa7.6□□□□□ -1.19
SNX13-202ENST00000409604 APLNQ9ULZ1 77 aa7.6□□□□□ -1.19
SNX13-202ENST00000409604 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
SNX13-202ENST00000409604 Q6ZRP5 223 aa7.6□□□□□ -1.19
SNX13-202ENST00000409604 MRPL55Q7Z7F7 128 aaKnown RBP7.6□□□□□ -1.19
SNX13-202ENST00000409604 A0A087WYN8 130 aa7.6□□□□□ -1.19
SNX13-202ENST00000409604 RTL8CO15255 209 aa7.6□□□□□ -1.19
SNX13-202ENST00000409604 WIPF1O43516 503 aa7.59□□□□□ -1.19
SNX13-202ENST00000409604 COX17Q14061 63 aa7.59□□□□□ -1.19
SNX13-202ENST00000409604 TRBV10-2A0A0K0K1G8 114 aa7.59□□□□□ -1.19
SNX13-202ENST00000409604 LINC01546A6NGU7 62 aa7.59□□□□□ -1.19
SNX13-202ENST00000409604 NDUFS5O43920 106 aa7.59□□□□□ -1.19
SNX13-202ENST00000409604 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
SNX13-202ENST00000409604 ZNF469Q96JG9 3925 aaPredicted RBP7.58□□□□□ -1.2
SNX13-202ENST00000409604 TEN1Q86WV5 123 aa7.58□□□□□ -1.2
SNX13-202ENST00000409604 C2orf48Q96LS8 159 aa7.58□□□□□ -1.2
SNX13-202ENST00000409604 LINC00167Q96N53 147 aa7.58□□□□□ -1.2
SNX13-202ENST00000409604 C3orf22Q8N5N4 141 aa7.58□□□□□ -1.2
SNX13-202ENST00000409604 TMEM256-PLSCR3K7ERE1 68 aa7.56□□□□□ -1.2
SNX13-202ENST00000409604 NREPQ16612 68 aa7.56□□□□□ -1.2
SNX13-202ENST00000409604 CCKP06307 115 aa7.56□□□□□ -1.2
SNX13-202ENST00000409604 PCP4P48539 62 aa7.56□□□□□ -1.2
SNX13-202ENST00000409604 REG3GQ6UW15 175 aa7.56□□□□□ -1.2
SNX13-202ENST00000409604 IGLV5-45A0A087WSX0 123 aa7.55□□□□□ -1.2
SNX13-202ENST00000409604 H0Y9J4 135 aa7.55□□□□□ -1.2
SNX13-202ENST00000409604 FLG2Q5D862 2391 aaPredicted RBP7.54□□□□□ -1.2
SNX13-202ENST00000409604 C15orf56Q8N910 161 aa7.54□□□□□ -1.2
SNX13-202ENST00000409604 CIRBP-AS1Q8TBR5 109 aa7.54□□□□□ -1.2
SNX13-202ENST00000409604 LINC00474Q9P2X8 69 aa7.54□□□□□ -1.2
SNX13-202ENST00000409604 TNP2Q05952 138 aa7.54□□□□□ -1.2
SNX13-202ENST00000409604 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
SNX13-202ENST00000409604 SERTAD4-AS1Q5TG53 156 aa7.53□□□□□ -1.2
SNX13-202ENST00000409604 UPK3BQ9BT76 320 aa7.53□□□□□ -1.2
SNX13-202ENST00000409604 XGP55808 180 aa7.53□□□□□ -1.2
SNX13-202ENST00000409604 DEFB116Q30KQ4 102 aa7.52□□□□□ -1.21
SNX13-202ENST00000409604 LST1O00453 97 aa7.52□□□□□ -1.21
SNX13-202ENST00000409604 KIAA0087Q14695 138 aa7.51□□□□□ -1.21
SNX13-202ENST00000409604 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms