RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.18
CHRNA1-203ENST00000409219 C9orf116Q5BN46 136 aaPredicted RBP7.71□□□□□ -1.18
CHRNA1-203ENST00000409219 TMEM170BQ5T4T1 132 aa7.71□□□□□ -1.18
CHRNA1-203ENST00000409219 CEND1Q8N111 149 aa7.71□□□□□ -1.18
CHRNA1-203ENST00000409219 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.7□□□□□ -1.18
CHRNA1-203ENST00000409219 IGKV2-29A2NJV5 120 aaPredicted RBP7.7□□□□□ -1.18
CHRNA1-203ENST00000409219 ZNF815PA8K554 130 aa7.7□□□□□ -1.18
CHRNA1-203ENST00000409219 LEPROTO15243 131 aa7.7□□□□□ -1.18
CHRNA1-203ENST00000409219 XCL1P47992 114 aa7.7□□□□□ -1.18
CHRNA1-203ENST00000409219 SMAGPQ0VAQ4 97 aa7.7□□□□□ -1.18
CHRNA1-203ENST00000409219 Q6ZVH6 145 aa7.7□□□□□ -1.18
CHRNA1-203ENST00000409219 CRCT1Q9UGL9 99 aa7.7□□□□□ -1.18
CHRNA1-203ENST00000409219 TINCRA0A1B0GVN0 87 aa7.69□□□□□ -1.18
CHRNA1-203ENST00000409219 FXYD2P54710 66 aa7.69□□□□□ -1.18
CHRNA1-203ENST00000409219 H7C423 109 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 J3QQQ9 107 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 AMMECR1LQ6DCA0 310 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 Q6ZUT4 128 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 FAM19A3Q7Z5A8 133 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 PLEKHB2Q96CS7 222 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 IGLV5-45A0A087WSX0 123 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 ZNF561-AS1K7EIQ3 104 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 CCL25O15444 150 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 UBE2D1P51668 147 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 UBE2V1Q13404 147 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 KRTAP11-1Q8IUC1 163 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 OR5A1Q8NGJ0 315 aa7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
CHRNA1-203ENST00000409219 SMIM13P0DJ93 91 aa7.67□□□□□ -1.18
CHRNA1-203ENST00000409219 LCE2DQ5TA82 110 aaPredicted RBP7.67□□□□□ -1.18
CHRNA1-203ENST00000409219 HIST1H4GQ99525 98 aa7.67□□□□□ -1.18
CHRNA1-203ENST00000409219 LINC00959A0A1B0GUT2 108 aa7.66□□□□□ -1.18
CHRNA1-203ENST00000409219 A0A1B0GWB2 263 aa7.66□□□□□ -1.18
CHRNA1-203ENST00000409219 LGALS3P17931 250 aaKnown RBP7.66□□□□□ -1.18
CHRNA1-203ENST00000409219 RPL13AP40429 203 aaKnown RBP7.66□□□□□ -1.18
CHRNA1-203ENST00000409219 SCGB1D4Q6XE38 83 aa7.66□□□□□ -1.18
CHRNA1-203ENST00000409219 APOMO95445 188 aa7.65□□□□□ -1.18
CHRNA1-203ENST00000409219 RPL18AQ02543 176 aaKnown RBP7.65□□□□□ -1.18
CHRNA1-203ENST00000409219 VAMP3Q15836 100 aa7.65□□□□□ -1.18
CHRNA1-203ENST00000409219 RNASE13Q5GAN3 156 aaKnown RBP7.64□□□□□ -1.19
CHRNA1-203ENST00000409219 CDC42SE2Q9NRR3 84 aa7.64□□□□□ -1.19
CHRNA1-203ENST00000409219 A0A087WZ39 114 aa7.63□□□□□ -1.19
CHRNA1-203ENST00000409219 TSPAN13O95857 204 aa7.63□□□□□ -1.19
CHRNA1-203ENST00000409219 GEMIN7Q9H840 131 aaKnown RBP7.63□□□□□ -1.19
CHRNA1-203ENST00000409219 FSIP2Q5CZC0 6907 aa7.63□□□□□ -1.19
CHRNA1-203ENST00000409219 TMEM238LA0A1B0GVL6 79 aa7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 A6NJY4 79 aa7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 HERVK_113P63121 156 aa7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 CD164L2Q6UWJ8 174 aa7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 NHP2Q9NX24 153 aaKnown RBP7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 H3BUT2 72 aa7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 LINC00242Q5T6M2 205 aa7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 TMEM101Q96IK0 257 aa7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 CAMK2N2Q96S95 79 aa7.62□□□□□ -1.19
CHRNA1-203ENST00000409219 IGLV5-39A0A0G2JS06 123 aa7.61□□□□□ -1.19
CHRNA1-203ENST00000409219 A0A1W2PPM0 123 aa7.61□□□□□ -1.19
CHRNA1-203ENST00000409219 RAB37Q96AX2 223 aa7.61□□□□□ -1.19
CHRNA1-203ENST00000409219 CDKN2A-AS1Q9UH64 79 aa7.61□□□□□ -1.19
CHRNA1-203ENST00000409219 FAM168BA1KXE4 195 aa7.6□□□□□ -1.19
CHRNA1-203ENST00000409219 K7ERJ3 54 aa7.6□□□□□ -1.19
CHRNA1-203ENST00000409219 SS18Q15532 418 aa7.6□□□□□ -1.19
CHRNA1-203ENST00000409219 GTF2H5Q6ZYL4 71 aa7.6□□□□□ -1.19
CHRNA1-203ENST00000409219 A0A0J9YXY3 114 aa7.59□□□□□ -1.19
CHRNA1-203ENST00000409219 TMEM238C9JI98 176 aa7.59□□□□□ -1.19
CHRNA1-203ENST00000409219 K7EP34 96 aa7.59□□□□□ -1.19
CHRNA1-203ENST00000409219 SPINK8P0C7L1 97 aa7.59□□□□□ -1.19
CHRNA1-203ENST00000409219 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
CHRNA1-203ENST00000409219 GAGE10A6NGK3 116 aa7.58□□□□□ -1.2
CHRNA1-203ENST00000409219 FABP2P12104 132 aa7.58□□□□□ -1.2
CHRNA1-203ENST00000409219 MALP21145 153 aa7.58□□□□□ -1.2
CHRNA1-203ENST00000409219 C2orf48Q96LS8 159 aa7.58□□□□□ -1.2
CHRNA1-203ENST00000409219 NDUFA1O15239 70 aa7.57□□□□□ -1.2
CHRNA1-203ENST00000409219 TIMM17BO60830 172 aa7.57□□□□□ -1.2
CHRNA1-203ENST00000409219 LITAFQ99732 161 aa7.57□□□□□ -1.2
CHRNA1-203ENST00000409219 TRAV13-1A0A0B4J241 112 aa7.56□□□□□ -1.2
CHRNA1-203ENST00000409219 SMIM1B2RUZ4 78 aa7.56□□□□□ -1.2
CHRNA1-203ENST00000409219 COX7A2LO14548 114 aa7.56□□□□□ -1.2
CHRNA1-203ENST00000409219 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
CHRNA1-203ENST00000409219 NAA38Q9BRA0 125 aaKnown RBP7.56□□□□□ -1.2
CHRNA1-203ENST00000409219 SPANXDQ9BXN6 97 aa7.56□□□□□ -1.2
CHRNA1-203ENST00000409219 SPANXCQ9NY87 97 aa7.56□□□□□ -1.2
CHRNA1-203ENST00000409219 SPCS1Q9Y6A9 102 aa7.56□□□□□ -1.2
CHRNA1-203ENST00000409219 RPL24P83731 157 aaKnown RBP7.55□□□□□ -1.2
CHRNA1-203ENST00000409219 KRTAP7-1Q8IUC3 87 aa7.55□□□□□ -1.2
CHRNA1-203ENST00000409219 RNF151Q2KHN1 245 aa7.55□□□□□ -1.2
CHRNA1-203ENST00000409219 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
CHRNA1-203ENST00000409219 CDIP1Q9H305 208 aa7.55□□□□□ -1.2
CHRNA1-203ENST00000409219 A0A087X002 238 aa7.54□□□□□ -1.2
CHRNA1-203ENST00000409219 CFC1BP0CG36 223 aa7.54□□□□□ -1.2
CHRNA1-203ENST00000409219 CFC1P0CG37 223 aa7.54□□□□□ -1.2
CHRNA1-203ENST00000409219 SPAG11BQ08648 103 aa7.54□□□□□ -1.2
CHRNA1-203ENST00000409219 TPRXLQ17RH7 258 aa7.54□□□□□ -1.2
CHRNA1-203ENST00000409219 A0A0B4J2C4 111 aa7.53□□□□□ -1.2
CHRNA1-203ENST00000409219 M0QXV9 152 aa7.53□□□□□ -1.2
CHRNA1-203ENST00000409219 IFITM1P13164 125 aa7.53□□□□□ -1.2
CHRNA1-203ENST00000409219 UBE2BP63146 152 aa7.53□□□□□ -1.2
CHRNA1-203ENST00000409219 MUSTN1Q8IVN3 82 aa7.53□□□□□ -1.2
CHRNA1-203ENST00000409219 IGHV3OR16-9A0A0B4J2B5 98 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms