RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CAMK2N2Q96S95 79 aa5.75□□□□□ -1.49
SNX13-201ENST00000409076 TENM3Q9P273 2699 aa5.75□□□□□ -1.49
SNX13-201ENST00000409076 A0A087WZ39 114 aa5.75□□□□□ -1.49
SNX13-201ENST00000409076 PLAC8L1A1L4L8 177 aa5.75□□□□□ -1.49
SNX13-201ENST00000409076 UQCRQO14949 82 aa5.75□□□□□ -1.49
SNX13-201ENST00000409076 TRBV7-7A0A0K0K1E9 115 aa5.75□□□□□ -1.49
SNX13-201ENST00000409076 HRCT1Q6UXD1 115 aa5.74□□□□□ -1.49
SNX13-201ENST00000409076 LRCOL1A6NCL2 159 aa5.74□□□□□ -1.49
SNX13-201ENST00000409076 ATOX1O00244 68 aa5.74□□□□□ -1.49
SNX13-201ENST00000409076 COX7CP15954 63 aa5.74□□□□□ -1.49
SNX13-201ENST00000409076 PRR4Q16378 134 aa5.74□□□□□ -1.49
SNX13-201ENST00000409076 TRBV10-3A0A0K0K1G6 114 aa5.74□□□□□ -1.49
SNX13-201ENST00000409076 RPL37AP8A6NKH3 93 aa5.74□□□□□ -1.49
SNX13-201ENST00000409076 IGLV1-51P01701 117 aa5.74□□□□□ -1.49
SNX13-201ENST00000409076 RBM3P98179 157 aaKnown RBP5.74□□□□□ -1.49
SNX13-201ENST00000409076 Q8NDZ9 215 aa5.73□□□□□ -1.49
SNX13-201ENST00000409076 FAM240AA0A1B0GVK7 77 aa5.73□□□□□ -1.49
SNX13-201ENST00000409076 Q8N814 137 aa5.73□□□□□ -1.49
SNX13-201ENST00000409076 A0A096LNI7 61 aa5.72□□□□□ -1.49
SNX13-201ENST00000409076 J3KT08 172 aa5.72□□□□□ -1.49
SNX13-201ENST00000409076 WFDC10BQ8IUB3 73 aa5.72□□□□□ -1.49
SNX13-201ENST00000409076 C22orf24Q9Y442 160 aa5.72□□□□□ -1.49
SNX13-201ENST00000409076 DEFB121Q5J5C9 76 aa5.72□□□□□ -1.49
SNX13-201ENST00000409076 SMIM9A6NGZ8 99 aa5.71□□□□□ -1.49
SNX13-201ENST00000409076 KRTAP10-3P60369 221 aa5.71□□□□□ -1.5
SNX13-201ENST00000409076 LINC01561Q8N1V8 128 aa5.71□□□□□ -1.5
SNX13-201ENST00000409076 RMI2Q96E14 147 aa5.71□□□□□ -1.5
SNX13-201ENST00000409076 OVOL2Q9BRP0 275 aa5.71□□□□□ -1.5
SNX13-201ENST00000409076 A0A0G2JQZ4 141 aa5.7□□□□□ -1.5
SNX13-201ENST00000409076 A0A1W2PNN7 141 aa5.7□□□□□ -1.5
SNX13-201ENST00000409076 C4orf26Q17RF5 130 aa5.7□□□□□ -1.5
SNX13-201ENST00000409076 MPLKIPQ8TAP9 179 aa5.7□□□□□ -1.5
SNX13-201ENST00000409076 CSMD3Q7Z407 3707 aa5.7□□□□□ -1.5
SNX13-201ENST00000409076 DEFB116Q30KQ4 102 aa5.7□□□□□ -1.5
SNX13-201ENST00000409076 DPH3Q96FX2 82 aa5.7□□□□□ -1.5
SNX13-201ENST00000409076 LY6G6DO95868 133 aa5.7□□□□□ -1.5
SNX13-201ENST00000409076 TMEM256-PLSCR3K7ERE1 68 aa5.69□□□□□ -1.5
SNX13-201ENST00000409076 FSHBP01225 129 aa5.69□□□□□ -1.5
SNX13-201ENST00000409076 CD164L2Q6UWJ8 174 aa5.69□□□□□ -1.5
SNX13-201ENST00000409076 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
SNX13-201ENST00000409076 X6R8D5 127 aa5.69□□□□□ -1.5
SNX13-201ENST00000409076 IGKV2-24A0A0C4DH68 120 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 C5orf47Q569G3 176 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 SERP2Q8N6R1 65 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 C19orf73Q9NVV2 129 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 CCKP06307 115 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 SPART-AS1P0CW21 52 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 CSNK1G2-AS1Q8NCQ2 148 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 DIRC1Q969H9 104 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 IMUPQ9GZP8 106 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 NANOS2P60321 138 aaKnown RBP5.68□□□□□ -1.5
SNX13-201ENST00000409076 Q8IZM0 81 aa5.68□□□□□ -1.5
SNX13-201ENST00000409076 KRTAP1-3Q8IUG1 177 aa5.67□□□□□ -1.5
SNX13-201ENST00000409076 NKAPP1Q8N9T2 125 aa5.67□□□□□ -1.5
SNX13-201ENST00000409076 A0A0U1RQV1 116 aa5.67□□□□□ -1.5
SNX13-201ENST00000409076 Q6ZTC4 211 aa5.67□□□□□ -1.5
SNX13-201ENST00000409076 BPY2O14599 106 aa5.67□□□□□ -1.5
SNX13-201ENST00000409076 IGHV4-30-4P0DP06 118 aa5.67□□□□□ -1.5
SNX13-201ENST00000409076 CMC4P56277 68 aaPredicted RBP5.66□□□□□ -1.5
SNX13-201ENST00000409076 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
SNX13-201ENST00000409076 JMJD7-PLA2G4BH0Y9G9 81 aa5.66□□□□□ -1.5
SNX13-201ENST00000409076 COX7BP24311 80 aa5.66□□□□□ -1.5
SNX13-201ENST00000409076 C1orf43Q9BWL3 253 aa5.66□□□□□ -1.5
SNX13-201ENST00000409076 F8WEM9 126 aa5.65□□□□□ -1.5
SNX13-201ENST00000409076 APOC4P55056 127 aa5.65□□□□□ -1.5
SNX13-201ENST00000409076 Q6JHZ5 121 aa5.65□□□□□ -1.5
SNX13-201ENST00000409076 TENM2Q9NT68 2774 aa5.65□□□□□ -1.5
SNX13-201ENST00000409076 KPRPQ5T749 579 aaPredicted RBP5.65□□□□□ -1.5
SNX13-201ENST00000409076 Q6ZRU5 148 aa5.65□□□□□ -1.5
SNX13-201ENST00000409076 IL17DQ8TAD2 202 aa5.65□□□□□ -1.5
SNX13-201ENST00000409076 C2orf48Q96LS8 159 aa5.65□□□□□ -1.5
SNX13-201ENST00000409076 UBE2BP63146 152 aa5.64□□□□□ -1.51
SNX13-201ENST00000409076 Q6ZVQ6 151 aa5.64□□□□□ -1.51
SNX13-201ENST00000409076 C6orf48Q9UBA6 75 aa5.64□□□□□ -1.51
SNX13-201ENST00000409076 PKIGQ9Y2B9 76 aa5.64□□□□□ -1.51
SNX13-201ENST00000409076 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.64□□□□□ -1.51
SNX13-201ENST00000409076 J3QKU1 62 aa5.64□□□□□ -1.51
SNX13-201ENST00000409076 FAM30AQ9NZY2 134 aa5.64□□□□□ -1.51
SNX13-201ENST00000409076 ZNF73O43830 326 aaPredicted RBP5.64□□□□□ -1.51
SNX13-201ENST00000409076 OXTP01178 125 aa5.63□□□□□ -1.51
SNX13-201ENST00000409076 C9orf66Q5T8R8 295 aa5.63□□□□□ -1.51
SNX13-201ENST00000409076 LINC01547P58512 204 aaPredicted RBP5.63□□□□□ -1.51
SNX13-201ENST00000409076 NREPQ16612 68 aa5.63□□□□□ -1.51
SNX13-201ENST00000409076 LINC00575Q6W349 94 aa5.63□□□□□ -1.51
SNX13-201ENST00000409076 LINC01600Q96MT4 127 aa5.63□□□□□ -1.51
SNX13-201ENST00000409076 TM2D3Q9BRN9 247 aa5.63□□□□□ -1.51
SNX13-201ENST00000409076 KIAA0087Q14695 138 aa5.63□□□□□ -1.51
SNX13-201ENST00000409076 CRYGAP11844 174 aa5.62□□□□□ -1.51
SNX13-201ENST00000409076 STAB2Q8WWQ8 2551 aa5.62□□□□□ -1.51
SNX13-201ENST00000409076 A0A0J9YWU9 116 aa5.62□□□□□ -1.51
SNX13-201ENST00000409076 FAM236DA0A1B0GTK5 79 aa5.62□□□□□ -1.51
SNX13-201ENST00000409076 FAM236CP0DP71 79 aa5.62□□□□□ -1.51
SNX13-201ENST00000409076 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
SNX13-201ENST00000409076 HIGD2AQ9BW72 106 aa5.6□□□□□ -1.51
SNX13-201ENST00000409076 SRRM2Q9UQ35 2752 aaKnown RBP5.6□□□□□ -1.51
SNX13-201ENST00000409076 LYPD5Q6UWN5 251 aa5.6□□□□□ -1.51
SNX13-201ENST00000409076 MUC7Q8TAX7 377 aa5.6□□□□□ -1.51
SNX13-201ENST00000409076 BRK1Q8WUW1 75 aa5.6□□□□□ -1.51
SNX13-201ENST00000409076 ST20-AS1Q8NBB2 130 aa5.59□□□□□ -1.51
SNX13-201ENST00000409076 DEFB131BA0A096LNP1 70 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms