RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 TMEM126AQ9H061 195 aa7.66□□□□□ -1.18
SNORD88B-201ENST00000408454 A0A096LNJ9 63 aa7.65□□□□□ -1.18
SNORD88B-201ENST00000408454 VPREB1P12018 145 aa7.65□□□□□ -1.18
SNORD88B-201ENST00000408454 PLNP26678 52 aa7.65□□□□□ -1.18
SNORD88B-201ENST00000408454 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
SNORD88B-201ENST00000408454 CBLN2Q8IUK8 224 aa7.65□□□□□ -1.18
SNORD88B-201ENST00000408454 MIEN1Q9BRT3 115 aa7.65□□□□□ -1.18
SNORD88B-201ENST00000408454 HSPB8Q9UJY1 196 aa7.65□□□□□ -1.18
SNORD88B-201ENST00000408454 C4orf48Q5BLP8 95 aa7.64□□□□□ -1.19
SNORD88B-201ENST00000408454 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
SNORD88B-201ENST00000408454 TMEM223A0PJW6 202 aa7.63□□□□□ -1.19
SNORD88B-201ENST00000408454 PRYO14603 147 aa7.63□□□□□ -1.19
SNORD88B-201ENST00000408454 PMCHL1Q16048 86 aa7.63□□□□□ -1.19
SNORD88B-201ENST00000408454 LINC00304Q8N9R0 145 aa7.63□□□□□ -1.19
SNORD88B-201ENST00000408454 PLEKHB2Q96CS7 222 aa7.63□□□□□ -1.19
SNORD88B-201ENST00000408454 LEPROTL1O95214 131 aa7.62□□□□□ -1.19
SNORD88B-201ENST00000408454 NMUP48645 174 aa7.62□□□□□ -1.19
SNORD88B-201ENST00000408454 KRTAP13-1Q8IUC0 172 aa7.62□□□□□ -1.19
SNORD88B-201ENST00000408454 BOD1L2Q8IYS8 172 aa7.61□□□□□ -1.19
SNORD88B-201ENST00000408454 URB1-AS1Q96HZ7 61 aa7.61□□□□□ -1.19
SNORD88B-201ENST00000408454 HIGD2AQ9BW72 106 aa7.61□□□□□ -1.19
SNORD88B-201ENST00000408454 NDUFA12Q9UI09 145 aa7.61□□□□□ -1.19
SNORD88B-201ENST00000408454 ETDCA0A1B0GVM5 59 aa7.6□□□□□ -1.19
SNORD88B-201ENST00000408454 TSPAN13O95857 204 aa7.6□□□□□ -1.19
SNORD88B-201ENST00000408454 LINC00337Q8N6G1 96 aa7.6□□□□□ -1.19
SNORD88B-201ENST00000408454 PRLHP81277 87 aa7.59□□□□□ -1.19
SNORD88B-201ENST00000408454 A0A087X002 238 aa7.58□□□□□ -1.2
SNORD88B-201ENST00000408454 TNXBP22105 4242 aa7.57□□□□□ -1.2
SNORD88B-201ENST00000408454 TRBV10-2A0A0K0K1G8 114 aa7.57□□□□□ -1.2
SNORD88B-201ENST00000408454 DPM2O94777 84 aa7.57□□□□□ -1.2
SNORD88B-201ENST00000408454 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
SNORD88B-201ENST00000408454 HINT1P49773 126 aaPredicted RBP7.57□□□□□ -1.2
SNORD88B-201ENST00000408454 JOSD1Q15040 202 aaPredicted RBP7.57□□□□□ -1.2
SNORD88B-201ENST00000408454 MIR7-3HGQ8N6C7 128 aa7.57□□□□□ -1.2
SNORD88B-201ENST00000408454 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
SNORD88B-201ENST00000408454 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
SNORD88B-201ENST00000408454 H0Y8G0 127 aa7.56□□□□□ -1.2
SNORD88B-201ENST00000408454 LEPROTO15243 131 aa7.56□□□□□ -1.2
SNORD88B-201ENST00000408454 SMIM13P0DJ93 91 aa7.56□□□□□ -1.2
SNORD88B-201ENST00000408454 KCNQ1DNQ9H478 68 aa7.56□□□□□ -1.2
SNORD88B-201ENST00000408454 A0A0U1RRA0 63 aa7.55□□□□□ -1.2
SNORD88B-201ENST00000408454 FAM19A2Q8N3H0 131 aa7.55□□□□□ -1.2
SNORD88B-201ENST00000408454 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
SNORD88B-201ENST00000408454 S100A7L2Q5SY68 101 aa7.54□□□□□ -1.2
SNORD88B-201ENST00000408454 FP248Q71RG6 208 aaPredicted RBP7.54□□□□□ -1.2
SNORD88B-201ENST00000408454 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
SNORD88B-201ENST00000408454 J3QQQ9 107 aa7.53□□□□□ -1.2
SNORD88B-201ENST00000408454 NDUFC2O95298 119 aa7.53□□□□□ -1.2
SNORD88B-201ENST00000408454 IGKCP01834 107 aa7.53□□□□□ -1.2
SNORD88B-201ENST00000408454 TRGC2P03986 189 aa7.53□□□□□ -1.2
SNORD88B-201ENST00000408454 TPRXLQ17RH7 258 aa7.53□□□□□ -1.2
SNORD88B-201ENST00000408454 YPEL4Q96NS1 127 aa7.53□□□□□ -1.2
SNORD88B-201ENST00000408454 SPRR4Q96PI1 79 aa7.53□□□□□ -1.2
SNORD88B-201ENST00000408454 SCO1O75880 301 aa7.52□□□□□ -1.21
SNORD88B-201ENST00000408454 SPINK1P00995 79 aa7.52□□□□□ -1.21
SNORD88B-201ENST00000408454 AKR1D1P51857 326 aa7.52□□□□□ -1.21
SNORD88B-201ENST00000408454 COPS9Q8WXC6 57 aa7.52□□□□□ -1.21
SNORD88B-201ENST00000408454 LOC107984156A0A0G2JMH3 177 aa7.51□□□□□ -1.21
SNORD88B-201ENST00000408454 C5orf52A6NGY3 159 aa7.51□□□□□ -1.21
SNORD88B-201ENST00000408454 NCR3O14931 201 aa7.51□□□□□ -1.21
SNORD88B-201ENST00000408454 SERF1AO75920 110 aa7.51□□□□□ -1.21
SNORD88B-201ENST00000408454 DDTP30046 118 aa7.51□□□□□ -1.21
SNORD88B-201ENST00000408454 SPRR1AP35321 89 aa7.51□□□□□ -1.21
SNORD88B-201ENST00000408454 SLC25A34Q6PIV7 304 aa7.51□□□□□ -1.21
SNORD88B-201ENST00000408454 ARL17AQ8IVW1 177 aa7.51□□□□□ -1.21
SNORD88B-201ENST00000408454 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
SNORD88B-201ENST00000408454 KRTAP13-2Q52LG2 175 aa7.5□□□□□ -1.21
SNORD88B-201ENST00000408454 ANAPC11Q9NYG5 84 aa7.49□□□□□ -1.21
SNORD88B-201ENST00000408454 TRBV10-3A0A0K0K1G6 114 aa7.48□□□□□ -1.21
SNORD88B-201ENST00000408454 FABP4P15090 132 aa7.48□□□□□ -1.21
SNORD88B-201ENST00000408454 RPS29P62273 56 aaKnown RBP7.48□□□□□ -1.21
SNORD88B-201ENST00000408454 SSBP3-AS1Q7Z2R9 100 aa7.48□□□□□ -1.21
SNORD88B-201ENST00000408454 LRP2P98164 4655 aa7.48□□□□□ -1.21
SNORD88B-201ENST00000408454 SMCR5Q8TEV8 140 aa7.47□□□□□ -1.21
SNORD88B-201ENST00000408454 Q6ZRX8 168 aa7.46□□□□□ -1.22
SNORD88B-201ENST00000408454 TRAV23DV6A0A075B6W5 121 aa7.45□□□□□ -1.22
SNORD88B-201ENST00000408454 E9PLD3 99 aa7.45□□□□□ -1.22
SNORD88B-201ENST00000408454 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
SNORD88B-201ENST00000408454 LINC00518Q8N0U6 118 aa7.45□□□□□ -1.22
SNORD88B-201ENST00000408454 C20orf202A1L168 122 aa7.44□□□□□ -1.22
SNORD88B-201ENST00000408454 TIMM17BO60830 172 aa7.44□□□□□ -1.22
SNORD88B-201ENST00000408454 PPDPFQ9H3Y8 114 aa7.44□□□□□ -1.22
SNORD88B-201ENST00000408454 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
SNORD88B-201ENST00000408454 B5MCH6 92 aa7.43□□□□□ -1.22
SNORD88B-201ENST00000408454 KRTAP4-16G5E9R7 235 aaPredicted RBP7.43□□□□□ -1.22
SNORD88B-201ENST00000408454 GAGE2AQ6NT46 116 aa7.43□□□□□ -1.22
SNORD88B-201ENST00000408454 Q8NBF4 154 aa7.43□□□□□ -1.22
SNORD88B-201ENST00000408454 Q8NDZ9 215 aa7.43□□□□□ -1.22
SNORD88B-201ENST00000408454 SLC25A20O43772 301 aa7.42□□□□□ -1.22
SNORD88B-201ENST00000408454 ZNF73O43830 326 aaPredicted RBP7.42□□□□□ -1.22
SNORD88B-201ENST00000408454 IGLV6-57P01721 117 aa7.42□□□□□ -1.22
SNORD88B-201ENST00000408454 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
SNORD88B-201ENST00000408454 C3orf22Q8N5N4 141 aa7.42□□□□□ -1.22
SNORD88B-201ENST00000408454 DHRS4-AS1Q9P1J3 65 aa7.42□□□□□ -1.22
SNORD88B-201ENST00000408454 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
SNORD88B-201ENST00000408454 DAND5Q8N907 189 aa7.41□□□□□ -1.22
SNORD88B-201ENST00000408454 RETNLBQ9BQ08 111 aa7.41□□□□□ -1.22
SNORD88B-201ENST00000408454 A0A0J9YXY3 114 aa7.4□□□□□ -1.22
SNORD88B-201ENST00000408454 COLCA2A8K830 154 aa7.4□□□□□ -1.22
SNORD88B-201ENST00000408454 LIMD2Q9BT23 127 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms