RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 A0A0J9YWU9 116 aa12.5□□□□□ -0.41
EWSR1-207ENST00000406548 IGHV4-30-4P0DP06 118 aa12.5□□□□□ -0.41
EWSR1-207ENST00000406548 SPART-AS1P0CW21 52 aa12.49□□□□□ -0.41
EWSR1-207ENST00000406548 OTOGQ6ZRI0 2925 aa12.49□□□□□ -0.41
EWSR1-207ENST00000406548 CYSRT1A8MQ03 144 aa12.49□□□□□ -0.41
EWSR1-207ENST00000406548 PRR34Q9NV39 138 aa12.49□□□□□ -0.41
EWSR1-207ENST00000406548 NOTCH2Q04721 2471 aa12.48□□□□□ -0.41
EWSR1-207ENST00000406548 KLK12Q9UKR0 248 aa12.47□□□□□ -0.41
EWSR1-207ENST00000406548 CRYGAP11844 174 aa12.46□□□□□ -0.41
EWSR1-207ENST00000406548 hADV29S1A0JD25 119 aa12.46□□□□□ -0.42
EWSR1-207ENST00000406548 INAFM1C9JVW0 142 aa12.46□□□□□ -0.42
EWSR1-207ENST00000406548 IGLV6-57P01721 117 aa12.45□□□□□ -0.42
EWSR1-207ENST00000406548 ATP5EP2Q5VTU8 51 aa12.45□□□□□ -0.42
EWSR1-207ENST00000406548 ENHOQ6UWT2 76 aa12.45□□□□□ -0.42
EWSR1-207ENST00000406548 USP17L23D6RBM5 183 aa12.44□□□□□ -0.42
EWSR1-207ENST00000406548 GVQW2A0A096LPI5 108 aaPredicted RBP12.43□□□□□ -0.42
EWSR1-207ENST00000406548 ZNF561-AS1K7EIQ3 104 aa12.43□□□□□ -0.42
EWSR1-207ENST00000406548 SERP2Q8N6R1 65 aa12.42□□□□□ -0.42
EWSR1-207ENST00000406548 C6orf48Q9UBA6 75 aa12.41□□□□□ -0.42
EWSR1-207ENST00000406548 RBM3P98179 157 aaKnown RBP12.41□□□□□ -0.42
EWSR1-207ENST00000406548 LYPD5Q6UWN5 251 aa12.41□□□□□ -0.42
EWSR1-207ENST00000406548 Q6ZQT0 140 aa12.4□□□□□ -0.42
EWSR1-207ENST00000406548 UBL5Q9BZL1 73 aa12.4□□□□□ -0.42
EWSR1-207ENST00000406548 TENM1Q9UKZ4 2725 aa12.38□□□□□ -0.43
EWSR1-207ENST00000406548 LOC110117498A0A087WWA1 95 aa12.38□□□□□ -0.43
EWSR1-207ENST00000406548 LAMTOR3Q9UHA4 124 aa12.38□□□□□ -0.43
EWSR1-207ENST00000406548 TRBV10-3A0A0K0K1G6 114 aa12.38□□□□□ -0.43
EWSR1-207ENST00000406548 TRAV23DV6A0A075B6W5 121 aa12.37□□□□□ -0.43
EWSR1-207ENST00000406548 Q6ZQY7 126 aa12.37□□□□□ -0.43
EWSR1-207ENST00000406548 WFDC9Q8NEX5 89 aa12.37□□□□□ -0.43
EWSR1-207ENST00000406548 XAGE1AQ9HD64 81 aa12.37□□□□□ -0.43
EWSR1-207ENST00000406548 DIRC1Q969H9 104 aa12.36□□□□□ -0.43
EWSR1-207ENST00000406548 UPK3BQ9BT76 320 aa12.35□□□□□ -0.43
EWSR1-207ENST00000406548 CYSTM1Q9H1C7 97 aa12.35□□□□□ -0.43
EWSR1-207ENST00000406548 FAM19A1Q7Z5A9 133 aa12.35□□□□□ -0.43
EWSR1-207ENST00000406548 H3BQ85 93 aa12.34□□□□□ -0.43
EWSR1-207ENST00000406548 NSD1Q96L73 2696 aaPredicted RBP12.34□□□□□ -0.43
EWSR1-207ENST00000406548 WIPF1O43516 503 aa12.33□□□□□ -0.44
EWSR1-207ENST00000406548 HIVEP1P15822 2718 aa12.32□□□□□ -0.44
EWSR1-207ENST00000406548 WFDC10BQ8IUB3 73 aa12.32□□□□□ -0.44
EWSR1-207ENST00000406548 DSCR8Q96T75 97 aa12.32□□□□□ -0.44
EWSR1-207ENST00000406548 M0R2N4 97 aa12.31□□□□□ -0.44
EWSR1-207ENST00000406548 ZNF73O43830 326 aaPredicted RBP12.31□□□□□ -0.44
EWSR1-207ENST00000406548 HIGD2BQ4VC39 106 aa12.31□□□□□ -0.44
EWSR1-207ENST00000406548 GHRHP01286 108 aa12.31□□□□□ -0.44
EWSR1-207ENST00000406548 CAMK2N2Q96S95 79 aa12.31□□□□□ -0.44
EWSR1-207ENST00000406548 COX7BP24311 80 aa12.3□□□□□ -0.44
EWSR1-207ENST00000406548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.29□□□□□ -0.44
EWSR1-207ENST00000406548 VPREB1P12018 145 aa12.29□□□□□ -0.44
EWSR1-207ENST00000406548 PDE6GP18545 87 aa12.29□□□□□ -0.44
EWSR1-207ENST00000406548 ELOF1P60002 83 aaKnown RBP12.29□□□□□ -0.44
EWSR1-207ENST00000406548 KPRPQ5T749 579 aaPredicted RBP12.29□□□□□ -0.44
EWSR1-207ENST00000406548 KRTAP26-1Q6PEX3 210 aa12.29□□□□□ -0.44
EWSR1-207ENST00000406548 H3BNG1 76 aa12.28□□□□□ -0.44
EWSR1-207ENST00000406548 TRRAPQ9Y4A5 3859 aa12.28□□□□□ -0.44
EWSR1-207ENST00000406548 J3KT08 172 aa12.27□□□□□ -0.44
EWSR1-207ENST00000406548 TMEM258P61165 79 aa12.27□□□□□ -0.44
EWSR1-207ENST00000406548 EGFEM1PQ0D2K5 195 aa12.27□□□□□ -0.44
EWSR1-207ENST00000406548 ATRQ13535 2644 aa12.27□□□□□ -0.45
EWSR1-207ENST00000406548 TRBV7-6A0A0J9YX20 115 aa12.26□□□□□ -0.45
EWSR1-207ENST00000406548 Q6ZVQ6 151 aa12.26□□□□□ -0.45
EWSR1-207ENST00000406548 TEP1Q99973 2627 aaKnown RBP12.26□□□□□ -0.45
EWSR1-207ENST00000406548 LINC01547P58512 204 aaPredicted RBP12.26□□□□□ -0.45
EWSR1-207ENST00000406548 Q6ZRU5 148 aa12.26□□□□□ -0.45
EWSR1-207ENST00000406548 RETNQ9HD89 108 aa12.26□□□□□ -0.45
EWSR1-207ENST00000406548 C15orf56Q8N910 161 aa12.25□□□□□ -0.45
EWSR1-207ENST00000406548 LOC107984640A0A0U1RRK4 108 aa12.24□□□□□ -0.45
EWSR1-207ENST00000406548 M0R378 163 aa12.24□□□□□ -0.45
EWSR1-207ENST00000406548 TRBV7-4A0A0J9YYF1 115 aa12.23□□□□□ -0.45
EWSR1-207ENST00000406548 HAMPP81172 84 aa12.23□□□□□ -0.45
EWSR1-207ENST00000406548 Q6ZTC4 211 aa12.23□□□□□ -0.45
EWSR1-207ENST00000406548 NDUFC2-KCTD14E9PQ53 114 aa12.22□□□□□ -0.45
EWSR1-207ENST00000406548 RPS28P62857 69 aaKnown RBP12.21□□□□□ -0.46
EWSR1-207ENST00000406548 CXCL6P80162 114 aa12.19□□□□□ -0.46
EWSR1-207ENST00000406548 ESRGQ1W209 222 aa12.19□□□□□ -0.46
EWSR1-207ENST00000406548 LINC00528Q8N1L1 170 aa12.19□□□□□ -0.46
EWSR1-207ENST00000406548 C1orf43Q9BWL3 253 aa12.18□□□□□ -0.46
EWSR1-207ENST00000406548 BCE1O60756 84 aa12.18□□□□□ -0.46
EWSR1-207ENST00000406548 OXLD1Q5BKU9 147 aa12.18□□□□□ -0.46
EWSR1-207ENST00000406548 KRTAP10-11P60412 298 aa12.17□□□□□ -0.46
EWSR1-207ENST00000406548 DPH3Q96FX2 82 aa12.17□□□□□ -0.46
EWSR1-207ENST00000406548 Q6ZRP5 223 aa12.16□□□□□ -0.46
EWSR1-207ENST00000406548 FLNBO75369 2602 aaKnown RBP12.15□□□□□ -0.46
EWSR1-207ENST00000406548 IGKV2D-24A0A075B6R9 120 aa12.14□□□□□ -0.47
EWSR1-207ENST00000406548 LINC01556Q5JQF7 62 aa12.14□□□□□ -0.47
EWSR1-207ENST00000406548 C20orf197Q8N268 126 aa12.14□□□□□ -0.47
EWSR1-207ENST00000406548 F8P00451 2351 aa12.14□□□□□ -0.47
EWSR1-207ENST00000406548 TRAV7A0A075B6U4 112 aa12.14□□□□□ -0.47
EWSR1-207ENST00000406548 F8WDY8 70 aa12.13□□□□□ -0.47
EWSR1-207ENST00000406548 FAM19A5Q7Z5A7 132 aaPredicted RBP12.13□□□□□ -0.47
EWSR1-207ENST00000406548 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
EWSR1-207ENST00000406548 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
EWSR1-207ENST00000406548 SCXQ7RTU7 201 aa12.1□□□□□ -0.47
EWSR1-207ENST00000406548 DEFB131BA0A096LNP1 70 aa12.09□□□□□ -0.47
EWSR1-207ENST00000406548 NKAPP1Q8N9T2 125 aa12.08□□□□□ -0.48
EWSR1-207ENST00000406548 PKD1L1Q8TDX9 2849 aa12.07□□□□□ -0.48
EWSR1-207ENST00000406548 KCNQ1DNQ9H478 68 aa12.07□□□□□ -0.48
EWSR1-207ENST00000406548 OXTP01178 125 aa12.06□□□□□ -0.48
EWSR1-207ENST00000406548 SERTAD4-AS1Q5TG53 156 aa12.06□□□□□ -0.48
EWSR1-207ENST00000406548 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms