RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 Q8NDZ9 215 aa10.95□□□□□ -0.66
PTPRN2-204ENST00000404321 VPREB1P12018 145 aa10.94□□□□□ -0.66
PTPRN2-204ENST00000404321 KRTAP1-4P0C5Y4 121 aa10.93□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BKO60814 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BJP06899 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 SMIM13P0DJ93 91 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BOP23527 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BBP33778 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BDP58876 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BCP62807 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST2H2BEQ16778 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 MEIG1Q5JSS6 88 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BHQ93079 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BNQ99877 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 HIST1H2BMQ99879 126 aa10.92□□□□□ -0.66
PTPRN2-204ENST00000404321 PLNP26678 52 aa10.91□□□□□ -0.66
PTPRN2-204ENST00000404321 TSPEAR-AS2P59090 65 aa10.91□□□□□ -0.66
PTPRN2-204ENST00000404321 RPL24P83731 157 aaKnown RBP10.91□□□□□ -0.66
PTPRN2-204ENST00000404321 NDUFA12Q9UI09 145 aa10.91□□□□□ -0.66
PTPRN2-204ENST00000404321 DPM2O94777 84 aa10.9□□□□□ -0.66
PTPRN2-204ENST00000404321 RPL28P46779 137 aaKnown RBP10.9□□□□□ -0.66
PTPRN2-204ENST00000404321 UBR4Q5T4S7 5183 aa10.9□□□□□ -0.67
PTPRN2-204ENST00000404321 TMEM238C9JI98 176 aa10.89□□□□□ -0.67
PTPRN2-204ENST00000404321 UBE2AP49459 152 aa10.89□□□□□ -0.67
PTPRN2-204ENST00000404321 MAP1LC3CQ9BXW4 147 aa10.89□□□□□ -0.67
PTPRN2-204ENST00000404321 IGLV1-50A0A075B6I6 118 aa10.88□□□□□ -0.67
PTPRN2-204ENST00000404321 MYMXA0A1B0GTQ4 84 aa10.88□□□□□ -0.67
PTPRN2-204ENST00000404321 LEPROTO15243 131 aa10.88□□□□□ -0.67
PTPRN2-204ENST00000404321 IGKCP01834 107 aa10.88□□□□□ -0.67
PTPRN2-204ENST00000404321 HERV-K104P63124 156 aa10.88□□□□□ -0.67
PTPRN2-204ENST00000404321 MIR7-3HGQ8N6C7 128 aa10.88□□□□□ -0.67
PTPRN2-204ENST00000404321 PLEKHB2Q96CS7 222 aa10.87□□□□□ -0.67
PTPRN2-204ENST00000404321 HERVK_113P61574 105 aa10.86□□□□□ -0.67
PTPRN2-204ENST00000404321 J3QQQ9 107 aa10.85□□□□□ -0.67
PTPRN2-204ENST00000404321 BOD1L2Q8IYS8 172 aa10.85□□□□□ -0.67
PTPRN2-204ENST00000404321 TMEM126AQ9H061 195 aa10.85□□□□□ -0.67
PTPRN2-204ENST00000404321 PRLHP81277 87 aa10.84□□□□□ -0.67
PTPRN2-204ENST00000404321 FAM19A1Q7Z5A9 133 aa10.84□□□□□ -0.67
PTPRN2-204ENST00000404321 KRTAP13-1Q8IUC0 172 aa10.84□□□□□ -0.67
PTPRN2-204ENST00000404321 DAND5Q8N907 189 aa10.84□□□□□ -0.67
PTPRN2-204ENST00000404321 M0R378 163 aa10.83□□□□□ -0.68
PTPRN2-204ENST00000404321 NCR3O14931 201 aa10.83□□□□□ -0.68
PTPRN2-204ENST00000404321 LGALS3P17931 250 aaKnown RBP10.83□□□□□ -0.68
PTPRN2-204ENST00000404321 SYS1-DBNDD2H3BUS1 97 aa10.82□□□□□ -0.68
PTPRN2-204ENST00000404321 LINC00587B1AMM8 73 aa10.81□□□□□ -0.68
PTPRN2-204ENST00000404321 ANAPC11Q9NYG5 84 aa10.81□□□□□ -0.68
PTPRN2-204ENST00000404321 RPL13AP40429 203 aaKnown RBP10.79□□□□□ -0.68
PTPRN2-204ENST00000404321 LRP2P98164 4655 aa10.79□□□□□ -0.68
PTPRN2-204ENST00000404321 A0A087X002 238 aa10.78□□□□□ -0.68
PTPRN2-204ENST00000404321 NMUP48645 174 aa10.77□□□□□ -0.68
PTPRN2-204ENST00000404321 LINC00518Q8N0U6 118 aa10.77□□□□□ -0.69
PTPRN2-204ENST00000404321 E9PLD3 99 aa10.76□□□□□ -0.69
PTPRN2-204ENST00000404321 LINC01545Q5VT33 79 aa10.76□□□□□ -0.69
PTPRN2-204ENST00000404321 PET117Q6UWS5 81 aa10.76□□□□□ -0.69
PTPRN2-204ENST00000404321 C3orf79P0CE67 100 aa10.75□□□□□ -0.69
PTPRN2-204ENST00000404321 CRYGAP11844 174 aa10.75□□□□□ -0.69
PTPRN2-204ENST00000404321 KRTDAPP60985 99 aa10.75□□□□□ -0.69
PTPRN2-204ENST00000404321 COA6Q5JTJ3 125 aaKnown RBP10.75□□□□□ -0.69
PTPRN2-204ENST00000404321 HIGD2AQ9BW72 106 aa10.75□□□□□ -0.69
PTPRN2-204ENST00000404321 NPC2P61916 151 aa10.74□□□□□ -0.69
PTPRN2-204ENST00000404321 IGKV2D-26A0A0A0MRZ7 120 aa10.73□□□□□ -0.69
PTPRN2-204ENST00000404321 A0A0J9YXY3 114 aa10.73□□□□□ -0.69
PTPRN2-204ENST00000404321 TRBV10-3A0A0K0K1G6 114 aa10.73□□□□□ -0.69
PTPRN2-204ENST00000404321 S100A6P06703 90 aa10.72□□□□□ -0.69
PTPRN2-204ENST00000404321 AKR1D1P51857 326 aa10.72□□□□□ -0.69
PTPRN2-204ENST00000404321 ADAMTSL4-AS1Q5T5F5 129 aa10.72□□□□□ -0.69
PTPRN2-204ENST00000404321 TYMSOSQ8TAI1 123 aa10.72□□□□□ -0.69
PTPRN2-204ENST00000404321 MIEN1Q9BRT3 115 aa10.72□□□□□ -0.69
PTPRN2-204ENST00000404321 PRYO14603 147 aa10.71□□□□□ -0.69
PTPRN2-204ENST00000404321 LOC107984156A0A0G2JMH3 177 aa10.7□□□□□ -0.7
PTPRN2-204ENST00000404321 EIF4EBP3O60516 100 aaPredicted RBP10.7□□□□□ -0.7
PTPRN2-204ENST00000404321 TSPAN13O95857 204 aa10.7□□□□□ -0.7
PTPRN2-204ENST00000404321 KRTAP13-2Q52LG2 175 aa10.7□□□□□ -0.7
PTPRN2-204ENST00000404321 ARL17AQ8IVW1 177 aa10.7□□□□□ -0.7
PTPRN2-204ENST00000404321 KCNQ1DNQ9H478 68 aa10.7□□□□□ -0.7
PTPRN2-204ENST00000404321 SOSTDC1Q6X4U4 206 aa10.69□□□□□ -0.7
PTPRN2-204ENST00000404321 TTTY13Q9BZ97 58 aa10.69□□□□□ -0.7
PTPRN2-204ENST00000404321 C5orf52A6NGY3 159 aa10.68□□□□□ -0.7
PTPRN2-204ENST00000404321 ETDCA0A1B0GVM5 59 aa10.67□□□□□ -0.7
PTPRN2-204ENST00000404321 DDTP30046 118 aa10.67□□□□□ -0.7
PTPRN2-204ENST00000404321 SPRR1AP35321 89 aa10.67□□□□□ -0.7
PTPRN2-204ENST00000404321 FAM229BQ4G0N7 80 aa10.67□□□□□ -0.7
PTPRN2-204ENST00000404321 SPANXB1Q9NS25 103 aaPredicted RBP10.67□□□□□ -0.7
PTPRN2-204ENST00000404321 ZNF815PA8K554 130 aa10.66□□□□□ -0.7
PTPRN2-204ENST00000404321 SMIM6P0DI80 62 aa10.66□□□□□ -0.7
PTPRN2-204ENST00000404321 SNRPEP62304 92 aaKnown RBP10.66□□□□□ -0.7
PTPRN2-204ENST00000404321 S100A12P80511 92 aa10.66□□□□□ -0.7
PTPRN2-204ENST00000404321 TRBV10-2A0A0K0K1G8 114 aa10.65□□□□□ -0.7
PTPRN2-204ENST00000404321 ATOH7Q8N100 152 aa10.65□□□□□ -0.7
PTPRN2-204ENST00000404321 LINC00337Q8N6G1 96 aa10.65□□□□□ -0.7
PTPRN2-204ENST00000404321 C12orf57Q99622 126 aa10.65□□□□□ -0.7
PTPRN2-204ENST00000404321 KRTAP4-16G5E9R7 235 aaPredicted RBP10.65□□□□□ -0.71
PTPRN2-204ENST00000404321 S100A7L2Q5SY68 101 aa10.65□□□□□ -0.71
PTPRN2-204ENST00000404321 LITAFQ99732 161 aa10.65□□□□□ -0.71
PTPRN2-204ENST00000404321 C20orf202A1L168 122 aa10.64□□□□□ -0.71
PTPRN2-204ENST00000404321 NDUFC2O95298 119 aa10.63□□□□□ -0.71
PTPRN2-204ENST00000404321 PRR4Q16378 134 aa10.63□□□□□ -0.71
PTPRN2-204ENST00000404321 SMCR5Q8TEV8 140 aa10.63□□□□□ -0.71
PTPRN2-204ENST00000404321 SPRR4Q96PI1 79 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms