RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 CHCHD10Q8WYQ3 142 aaPredicted RBP7.39□□□□□ -1.23
LINC00649-202ENST00000400353 CCL18P55774 89 aa7.38□□□□□ -1.23
LINC00649-202ENST00000400353 H3BNG1 76 aa7.37□□□□□ -1.23
LINC00649-202ENST00000400353 HTN3P15516 51 aa7.37□□□□□ -1.23
LINC00649-202ENST00000400353 COX17Q14061 63 aa7.37□□□□□ -1.23
LINC00649-202ENST00000400353 CLPSL2Q6UWE3 100 aa7.37□□□□□ -1.23
LINC00649-202ENST00000400353 EGFEM1PQ0D2K5 195 aa7.37□□□□□ -1.23
LINC00649-202ENST00000400353 A0A0U1RQV1 116 aa7.36□□□□□ -1.23
LINC00649-202ENST00000400353 MUC7Q8TAX7 377 aa7.36□□□□□ -1.23
LINC00649-202ENST00000400353 IGKV2-28A0A075B6P5 120 aa7.36□□□□□ -1.23
LINC00649-202ENST00000400353 IGKV2D-28P01615 120 aa7.36□□□□□ -1.23
LINC00649-202ENST00000400353 UPK3BQ9BT76 320 aa7.36□□□□□ -1.23
LINC00649-202ENST00000400353 C11orf68Q9H3H3 251 aaKnown RBP7.36□□□□□ -1.23
LINC00649-202ENST00000400353 DNHD1Q96M86 4753 aa7.35□□□□□ -1.23
LINC00649-202ENST00000400353 H0YGX0 51 aa7.35□□□□□ -1.23
LINC00649-202ENST00000400353 ATOX1O00244 68 aa7.35□□□□□ -1.23
LINC00649-202ENST00000400353 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
LINC00649-202ENST00000400353 DEFB121Q5J5C9 76 aa7.35□□□□□ -1.23
LINC00649-202ENST00000400353 LINC00337Q8N6G1 96 aa7.35□□□□□ -1.23
LINC00649-202ENST00000400353 HIST1H4AP62805 103 aaKnown RBP7.34□□□□□ -1.23
LINC00649-202ENST00000400353 KRTAP10-11P60412 298 aa7.34□□□□□ -1.23
LINC00649-202ENST00000400353 MDFIQ99750 246 aa7.34□□□□□ -1.23
LINC00649-202ENST00000400353 PRR34Q9NV39 138 aa7.34□□□□□ -1.23
LINC00649-202ENST00000400353 SERP1Q9Y6X1 66 aa7.34□□□□□ -1.23
LINC00649-202ENST00000400353 CMYA5Q8N3K9 4069 aa7.33□□□□□ -1.24
LINC00649-202ENST00000400353 TEX49A0A1B0GTD5 131 aa7.33□□□□□ -1.24
LINC00649-202ENST00000400353 LYPD5Q6UWN5 251 aa7.33□□□□□ -1.24
LINC00649-202ENST00000400353 Q6ZRU5 148 aa7.33□□□□□ -1.24
LINC00649-202ENST00000400353 CYSTM1Q9H1C7 97 aa7.33□□□□□ -1.24
LINC00649-202ENST00000400353 SMIM26A0A096LP01 95 aa7.32□□□□□ -1.24
LINC00649-202ENST00000400353 SMIM11BQ8TCY0 68 aa7.32□□□□□ -1.24
LINC00649-202ENST00000400353 IGLV10-54A0A075B6I4 117 aa7.31□□□□□ -1.24
LINC00649-202ENST00000400353 BRK1Q8WUW1 75 aa7.31□□□□□ -1.24
LINC00649-202ENST00000400353 ACYP1P07311 99 aa7.31□□□□□ -1.24
LINC00649-202ENST00000400353 SPAG11BQ08648 103 aa7.31□□□□□ -1.24
LINC00649-202ENST00000400353 Q8N3U1 123 aa7.31□□□□□ -1.24
LINC00649-202ENST00000400353 BAALC-AS2P0C853 105 aa7.3□□□□□ -1.24
LINC00649-202ENST00000400353 KLK12Q9UKR0 248 aa7.3□□□□□ -1.24
LINC00649-202ENST00000400353 DNAL4O96015 105 aa7.29□□□□□ -1.24
LINC00649-202ENST00000400353 KPRPQ5T749 579 aaPredicted RBP7.29□□□□□ -1.24
LINC00649-202ENST00000400353 FAM218AQ96MZ4 157 aa7.29□□□□□ -1.24
LINC00649-202ENST00000400353 ENHOQ6UWT2 76 aa7.29□□□□□ -1.24
LINC00649-202ENST00000400353 LAMTOR3Q9UHA4 124 aa7.29□□□□□ -1.24
LINC00649-202ENST00000400353 GVQW2A0A096LPI5 108 aaPredicted RBP7.28□□□□□ -1.24
LINC00649-202ENST00000400353 A0A0J9YWU9 116 aa7.28□□□□□ -1.24
LINC00649-202ENST00000400353 LINC00643Q86TS7 51 aa7.28□□□□□ -1.24
LINC00649-202ENST00000400353 PRR15Q8IV56 129 aa7.28□□□□□ -1.24
LINC00649-202ENST00000400353 NOTCH1P46531 2555 aa7.28□□□□□ -1.24
LINC00649-202ENST00000400353 MGAM2Q2M2H8 2515 aa7.28□□□□□ -1.24
LINC00649-202ENST00000400353 INAFM2P0DMQ5 153 aa7.28□□□□□ -1.24
LINC00649-202ENST00000400353 SERP2Q8N6R1 65 aa7.28□□□□□ -1.24
LINC00649-202ENST00000400353 NBEAL1Q6ZS30 2694 aa7.27□□□□□ -1.25
LINC00649-202ENST00000400353 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
LINC00649-202ENST00000400353 SDIM1Q6ZPB5 146 aa7.26□□□□□ -1.25
LINC00649-202ENST00000400353 Q6ZTC4 211 aa7.26□□□□□ -1.25
LINC00649-202ENST00000400353 MRPL55Q7Z7F7 128 aaKnown RBP7.26□□□□□ -1.25
LINC00649-202ENST00000400353 C11orf45Q8TAV5 145 aa7.26□□□□□ -1.25
LINC00649-202ENST00000400353 A0A087WYN8 130 aa7.24□□□□□ -1.25
LINC00649-202ENST00000400353 H3BS24 57 aa7.24□□□□□ -1.25
LINC00649-202ENST00000400353 UNQ6190/PRO20217Q6UXQ8 127 aa7.24□□□□□ -1.25
LINC00649-202ENST00000400353 DEFB131BA0A096LNP1 70 aa7.24□□□□□ -1.25
LINC00649-202ENST00000400353 WFDC10BQ8IUB3 73 aa7.24□□□□□ -1.25
LINC00649-202ENST00000400353 Q9HAA7 133 aa7.24□□□□□ -1.25
LINC00649-202ENST00000400353 LECT2O14960 151 aa7.23□□□□□ -1.25
LINC00649-202ENST00000400353 RPL18AQ02543 176 aaKnown RBP7.23□□□□□ -1.25
LINC00649-202ENST00000400353 C9orf116Q5BN46 136 aaPredicted RBP7.23□□□□□ -1.25
LINC00649-202ENST00000400353 C6orf223Q8N319 242 aa7.23□□□□□ -1.25
LINC00649-202ENST00000400353 LINC00167Q96N53 147 aa7.23□□□□□ -1.25
LINC00649-202ENST00000400353 NANOS2P60321 138 aaKnown RBP7.22□□□□□ -1.25
LINC00649-202ENST00000400353 LINC01556Q5JQF7 62 aa7.22□□□□□ -1.25
LINC00649-202ENST00000400353 S100A7L2Q5SY68 101 aa7.22□□□□□ -1.25
LINC00649-202ENST00000400353 C10orf25Q5T742 122 aa7.22□□□□□ -1.25
LINC00649-202ENST00000400353 ORMDL1Q9P0S3 153 aa7.22□□□□□ -1.25
LINC00649-202ENST00000400353 C22orf24Q9Y442 160 aa7.22□□□□□ -1.25
LINC00649-202ENST00000400353 NBEAL2Q6ZNJ1 2754 aa7.22□□□□□ -1.25
LINC00649-202ENST00000400353 ESRGQ1W209 222 aa7.21□□□□□ -1.25
LINC00649-202ENST00000400353 TRBV7-6A0A0J9YX20 115 aa7.21□□□□□ -1.26
LINC00649-202ENST00000400353 NCR3O14931 201 aa7.2□□□□□ -1.26
LINC00649-202ENST00000400353 KRTAP26-1Q6PEX3 210 aa7.2□□□□□ -1.26
LINC00649-202ENST00000400353 C6orf48Q9UBA6 75 aa7.2□□□□□ -1.26
LINC00649-202ENST00000400353 TRAV10A0A0B4J240 114 aa7.2□□□□□ -1.26
LINC00649-202ENST00000400353 VPREB1P12018 145 aa7.2□□□□□ -1.26
LINC00649-202ENST00000400353 OBSCN-AS1Q96MR7 158 aa7.2□□□□□ -1.26
LINC00649-202ENST00000400353 PRR3P79522 188 aaKnown RBP7.19□□□□□ -1.26
LINC00649-202ENST00000400353 CAMK2N2Q96S95 79 aa7.19□□□□□ -1.26
LINC00649-202ENST00000400353 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
LINC00649-202ENST00000400353 Q8N814 137 aa7.18□□□□□ -1.26
LINC00649-202ENST00000400353 H3BQ85 93 aa7.18□□□□□ -1.26
LINC00649-202ENST00000400353 IGLV6-57P01721 117 aa7.18□□□□□ -1.26
LINC00649-202ENST00000400353 TMEM256-PLSCR3K7ERE1 68 aa7.17□□□□□ -1.26
LINC00649-202ENST00000400353 DNAH10OSP0CZ25 163 aa7.17□□□□□ -1.26
LINC00649-202ENST00000400353 TM2D3Q9BRN9 247 aa7.17□□□□□ -1.26
LINC00649-202ENST00000400353 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
LINC00649-202ENST00000400353 C6orf99Q4VX62 202 aa7.16□□□□□ -1.26
LINC00649-202ENST00000400353 Q8NDZ9 215 aa7.16□□□□□ -1.26
LINC00649-202ENST00000400353 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
LINC00649-202ENST00000400353 C15orf56Q8N910 161 aa7.16□□□□□ -1.26
LINC00649-202ENST00000400353 PRB2P02812 416 aaPredicted RBP7.15□□□□□ -1.26
LINC00649-202ENST00000400353 HIGD2BQ4VC39 106 aa7.15□□□□□ -1.26
LINC00649-202ENST00000400353 LINC00575Q6W349 94 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms