RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 PIP4P1Q86T03 277 aa6.14□□□□□ -1.43
CACNA1C-220ENST00000399655 SMIM1B2RUZ4 78 aa6.14□□□□□ -1.43
CACNA1C-220ENST00000399655 PROK2Q9HC23 129 aa6.13□□□□□ -1.43
CACNA1C-220ENST00000399655 POLR2KP53803 58 aaKnown RBP6.13□□□□□ -1.43
CACNA1C-220ENST00000399655 RBM12B-AS1Q9P1G2 102 aa6.13□□□□□ -1.43
CACNA1C-220ENST00000399655 KLLNB2CW77 178 aa6.13□□□□□ -1.43
CACNA1C-220ENST00000399655 LINC00242Q5T6M2 205 aa6.12□□□□□ -1.43
CACNA1C-220ENST00000399655 GDF5OSQ5U4N7 250 aa6.12□□□□□ -1.43
CACNA1C-220ENST00000399655 A8MWP4 228 aa6.12□□□□□ -1.43
CACNA1C-220ENST00000399655 IGLV2-11P01706 119 aa6.12□□□□□ -1.43
CACNA1C-220ENST00000399655 IGLV1-47P01700 117 aa6.11□□□□□ -1.43
CACNA1C-220ENST00000399655 Q8N7P7 452 aa6.11□□□□□ -1.43
CACNA1C-220ENST00000399655 LINC00588Q9Y4M8 146 aa6.11□□□□□ -1.43
CACNA1C-220ENST00000399655 COX6A2Q02221 97 aa6.11□□□□□ -1.43
CACNA1C-220ENST00000399655 IGIPA6NJ69 53 aa6.1□□□□□ -1.43
CACNA1C-220ENST00000399655 SPATA3Q8NHX4 192 aa6.1□□□□□ -1.43
CACNA1C-220ENST00000399655 IGLV2-8P01709 118 aa6.1□□□□□ -1.43
CACNA1C-220ENST00000399655 MGAM2Q2M2H8 2515 aa6.1□□□□□ -1.43
CACNA1C-220ENST00000399655 NBEAL1Q6ZS30 2694 aa6.1□□□□□ -1.43
CACNA1C-220ENST00000399655 Q96NJ1 140 aa6.1□□□□□ -1.43
CACNA1C-220ENST00000399655 C1orf229Q6ZS94 237 aaPredicted RBP6.09□□□□□ -1.43
CACNA1C-220ENST00000399655 TYMSOSQ8TAI1 123 aa6.09□□□□□ -1.43
CACNA1C-220ENST00000399655 TRBV7-4A0A0J9YYF1 115 aa6.09□□□□□ -1.43
CACNA1C-220ENST00000399655 A8MUN3 132 aa6.09□□□□□ -1.43
CACNA1C-220ENST00000399655 DEFB1P60022 68 aa6.09□□□□□ -1.43
CACNA1C-220ENST00000399655 PRRC2CQ9Y520 2896 aaKnown RBP6.09□□□□□ -1.44
CACNA1C-220ENST00000399655 SMCR5Q8TEV8 140 aa6.08□□□□□ -1.44
CACNA1C-220ENST00000399655 PSORS1C2Q9UIG4 136 aa6.08□□□□□ -1.44
CACNA1C-220ENST00000399655 KRTAP27-1Q3LI81 207 aa6.08□□□□□ -1.44
CACNA1C-220ENST00000399655 Q6ZSV7 163 aa6.08□□□□□ -1.44
CACNA1C-220ENST00000399655 PRR9Q5T870 116 aa6.07□□□□□ -1.44
CACNA1C-220ENST00000399655 CDIP1Q9H305 208 aa6.07□□□□□ -1.44
CACNA1C-220ENST00000399655 MAST4O15021 2626 aa6.07□□□□□ -1.44
CACNA1C-220ENST00000399655 LINC00574Q9H8X3 128 aa6.07□□□□□ -1.44
CACNA1C-220ENST00000399655 SPANXA2-OT1Q8N9U9 137 aa6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 AKAP13Q12802 2813 aa6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 AMELXQ99217 191 aa6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 ATRQ13535 2644 aa6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 ADORA2A-AS1P86434 159 aa6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 KIF25-AS1Q9Y6Z4 181 aa6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 RPL37AP61513 92 aaKnown RBP6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 IGLV5-45A0A087WSX0 123 aa6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 Q6ZRP5 223 aa6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 MRPL34Q9BQ48 92 aaKnown RBP6.06□□□□□ -1.44
CACNA1C-220ENST00000399655 STAB2Q8WWQ8 2551 aa6.05□□□□□ -1.44
CACNA1C-220ENST00000399655 CENPEQ02224 2701 aa6.05□□□□□ -1.44
CACNA1C-220ENST00000399655 PRR3P79522 188 aaKnown RBP6.05□□□□□ -1.44
CACNA1C-220ENST00000399655 HRES1P13985 223 aa6.04□□□□□ -1.44
CACNA1C-220ENST00000399655 KLKP1Q107X0 134 aa6.04□□□□□ -1.44
CACNA1C-220ENST00000399655 PSMG3-AS1Q96PY0 264 aa6.04□□□□□ -1.44
CACNA1C-220ENST00000399655 IGLV6-57P01721 117 aa6.03□□□□□ -1.44
CACNA1C-220ENST00000399655 C22orf24Q9Y442 160 aa6.03□□□□□ -1.44
CACNA1C-220ENST00000399655 CFAP46Q8IYW2 2715 aa6.03□□□□□ -1.44
CACNA1C-220ENST00000399655 PROK1P58294 105 aa6.03□□□□□ -1.44
CACNA1C-220ENST00000399655 ADAMTSL4-AS1Q5T5F5 129 aa6.03□□□□□ -1.44
CACNA1C-220ENST00000399655 Q6ZRX8 168 aa6.03□□□□□ -1.44
CACNA1C-220ENST00000399655 CRIP1P50238 77 aa6.02□□□□□ -1.45
CACNA1C-220ENST00000399655 LTBP2Q14767 1821 aa6.02□□□□□ -1.45
CACNA1C-220ENST00000399655 LINC00476Q8WZB0 136 aa6.02□□□□□ -1.45
CACNA1C-220ENST00000399655 PLA2G2CQ5R387 149 aa6.02□□□□□ -1.45
CACNA1C-220ENST00000399655 FAM104AQ969W3 186 aa6.01□□□□□ -1.45
CACNA1C-220ENST00000399655 ZNF503-AS2A6NEH8 195 aa6.01□□□□□ -1.45
CACNA1C-220ENST00000399655 FBXL19-AS1Q494R0 122 aa6□□□□□ -1.45
CACNA1C-220ENST00000399655 J3QL48 77 aa6□□□□□ -1.45
CACNA1C-220ENST00000399655 LINC00336Q6ZUF6 198 aa6□□□□□ -1.45
CACNA1C-220ENST00000399655 IGLV5-48A0A075B6I7 105 aa6□□□□□ -1.45
CACNA1C-220ENST00000399655 A0A0D9SG42 100 aa5.99□□□□□ -1.45
CACNA1C-220ENST00000399655 PLAC4Q8WY50 150 aa5.99□□□□□ -1.45
CACNA1C-220ENST00000399655 H7BZZ5 65 aa5.99□□□□□ -1.45
CACNA1C-220ENST00000399655 WIPF1O43516 503 aa5.99□□□□□ -1.45
CACNA1C-220ENST00000399655 KRTAP16-1A8MUX0 517 aa5.98□□□□□ -1.45
CACNA1C-220ENST00000399655 IGLV5-37A0A075B6J1 123 aa5.97□□□□□ -1.45
CACNA1C-220ENST00000399655 COX8CQ7Z4L0 72 aa5.97□□□□□ -1.45
CACNA1C-220ENST00000399655 HELZ2Q9BYK8 2649 aaKnown RBP5.96□□□□□ -1.45
CACNA1C-220ENST00000399655 A8MTW9 85 aa5.96□□□□□ -1.45
CACNA1C-220ENST00000399655 SPINK7P58062 85 aa5.96□□□□□ -1.46
CACNA1C-220ENST00000399655 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.46
CACNA1C-220ENST00000399655 LINC01006Q8NI28 216 aa5.96□□□□□ -1.46
CACNA1C-220ENST00000399655 BRWD1-AS2P59051 145 aa5.95□□□□□ -1.46
CACNA1C-220ENST00000399655 IGLV5-39A0A0G2JS06 123 aa5.95□□□□□ -1.46
CACNA1C-220ENST00000399655 TSPEAR-AS2P59090 65 aa5.95□□□□□ -1.46
CACNA1C-220ENST00000399655 IGHV3OR16-9A0A0B4J2B5 98 aa5.94□□□□□ -1.46
CACNA1C-220ENST00000399655 IGFL2Q6UWQ7 119 aa5.94□□□□□ -1.46
CACNA1C-220ENST00000399655 C16orf90A8MZG2 172 aa5.94□□□□□ -1.46
CACNA1C-220ENST00000399655 Q6ZRU5 148 aa5.94□□□□□ -1.46
CACNA1C-220ENST00000399655 K7EQZ3 153 aa5.94□□□□□ -1.46
CACNA1C-220ENST00000399655 LINC00167Q96N53 147 aa5.94□□□□□ -1.46
CACNA1C-220ENST00000399655 NOTCH1P46531 2555 aa5.93□□□□□ -1.46
CACNA1C-220ENST00000399655 INAFM1C9JVW0 142 aa5.93□□□□□ -1.46
CACNA1C-220ENST00000399655 GRNP28799 593 aaKnown RBP5.93□□□□□ -1.46
CACNA1C-220ENST00000399655 SEC61BP60468 96 aaKnown RBP5.93□□□□□ -1.46
CACNA1C-220ENST00000399655 TLX1NBP0CAT3 122 aa5.92□□□□□ -1.46
CACNA1C-220ENST00000399655 A0A1B0GVX0 72 aa5.92□□□□□ -1.46
CACNA1C-220ENST00000399655 ZNF575Q86XF7 245 aa5.91□□□□□ -1.46
CACNA1C-220ENST00000399655 LINC00304Q8N9R0 145 aa5.91□□□□□ -1.46
CACNA1C-220ENST00000399655 A0A1B0GU33 70 aa5.9□□□□□ -1.46
CACNA1C-220ENST00000399655 LMO4P61968 165 aa5.9□□□□□ -1.46
CACNA1C-220ENST00000399655 Q75L30 129 aa5.9□□□□□ -1.46
CACNA1C-220ENST00000399655 IGLV1-40P01703 118 aa5.9□□□□□ -1.47
CACNA1C-220ENST00000399655 CEP295Q9C0D2 2601 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms