RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 CSPG4Q6UVK1 2322 aa7.68□□□□□ -1.18
CACNA1C-210ENST00000399606 GAS8-AS1O95177 125 aa7.68□□□□□ -1.18
CACNA1C-210ENST00000399606 LINC00313P59037 77 aa7.68□□□□□ -1.18
CACNA1C-210ENST00000399606 ABCA2Q9BZC7 2435 aa7.67□□□□□ -1.18
CACNA1C-210ENST00000399606 PTPRSQ13332 1948 aa7.67□□□□□ -1.18
CACNA1C-210ENST00000399606 BDP1A6H8Y1 2624 aa7.67□□□□□ -1.18
CACNA1C-210ENST00000399606 A0A1W2PPR1 153 aa7.67□□□□□ -1.18
CACNA1C-210ENST00000399606 SPG11Q96JI7 2443 aa7.67□□□□□ -1.18
CACNA1C-210ENST00000399606 SPATA3Q8NHX4 192 aa7.66□□□□□ -1.18
CACNA1C-210ENST00000399606 PRO0628Q9UI54 55 aa7.66□□□□□ -1.18
CACNA1C-210ENST00000399606 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
CACNA1C-210ENST00000399606 Q6ZSN1 163 aa7.65□□□□□ -1.18
CACNA1C-210ENST00000399606 CCDC168Q8NDH2 2452 aa7.65□□□□□ -1.18
CACNA1C-210ENST00000399606 HCFC1P51610 2035 aa7.65□□□□□ -1.19
CACNA1C-210ENST00000399606 KIF25-AS1Q9Y6Z4 181 aa7.65□□□□□ -1.19
CACNA1C-210ENST00000399606 EPM2AB3EWF7 344 aa7.64□□□□□ -1.19
CACNA1C-210ENST00000399606 TSPEAR-AS2P59090 65 aa7.63□□□□□ -1.19
CACNA1C-210ENST00000399606 TP53AIP1Q9HCN2 124 aa7.63□□□□□ -1.19
CACNA1C-210ENST00000399606 ADAMTSL4-AS1Q5T5F5 129 aa7.63□□□□□ -1.19
CACNA1C-210ENST00000399606 LINC01600Q96MT4 127 aa7.62□□□□□ -1.19
CACNA1C-210ENST00000399606 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
CACNA1C-210ENST00000399606 C5orf42Q9H799 3197 aa7.61□□□□□ -1.19
CACNA1C-210ENST00000399606 ARHGAP32A7KAX9 2087 aa7.61□□□□□ -1.19
CACNA1C-210ENST00000399606 ADAMTS20P59510 1910 aa7.61□□□□□ -1.19
CACNA1C-210ENST00000399606 LINC00846Q9NV44 126 aa7.61□□□□□ -1.19
CACNA1C-210ENST00000399606 LUZP6Q538Z0 58 aa7.61□□□□□ -1.19
CACNA1C-210ENST00000399606 Q8NBF4 154 aa7.61□□□□□ -1.19
CACNA1C-210ENST00000399606 LINC01561Q8N1V8 128 aa7.6□□□□□ -1.19
CACNA1C-210ENST00000399606 AMELXQ99217 191 aa7.59□□□□□ -1.19
CACNA1C-210ENST00000399606 KIAA0087Q14695 138 aa7.59□□□□□ -1.19
CACNA1C-210ENST00000399606 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
CACNA1C-210ENST00000399606 BCE1O60756 84 aa7.59□□□□□ -1.19
CACNA1C-210ENST00000399606 BRCA2P51587 3418 aa7.59□□□□□ -1.19
CACNA1C-210ENST00000399606 LINC00336Q6ZUF6 198 aa7.59□□□□□ -1.19
CACNA1C-210ENST00000399606 LINC00588Q9Y4M8 146 aa7.59□□□□□ -1.19
CACNA1C-210ENST00000399606 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.2
CACNA1C-210ENST00000399606 RBM12B-AS1Q9P1G2 102 aa7.59□□□□□ -1.2
CACNA1C-210ENST00000399606 ACACBO00763 2458 aa7.58□□□□□ -1.2
CACNA1C-210ENST00000399606 ZNF580Q9UK33 172 aa7.58□□□□□ -1.2
CACNA1C-210ENST00000399606 A0A1B0GUV1 79 aa7.57□□□□□ -1.2
CACNA1C-210ENST00000399606 IGLV5-37A0A075B6J1 123 aa7.56□□□□□ -1.2
CACNA1C-210ENST00000399606 TM2D3Q9BRN9 247 aa7.56□□□□□ -1.2
CACNA1C-210ENST00000399606 KLK9Q2XQG4 91 aa7.56□□□□□ -1.2
CACNA1C-210ENST00000399606 AGRNO00468 2067 aa7.56□□□□□ -1.2
CACNA1C-210ENST00000399606 CEP350Q5VT06 3117 aa7.55□□□□□ -1.2
CACNA1C-210ENST00000399606 NAV3Q8IVL0 2385 aa7.54□□□□□ -1.2
CACNA1C-210ENST00000399606 K7EIL1 84 aa7.53□□□□□ -1.2
CACNA1C-210ENST00000399606 DNAH10OSP0CZ25 163 aa7.53□□□□□ -1.2
CACNA1C-210ENST00000399606 MKI67P46013 3256 aaKnown RBP7.53□□□□□ -1.2
CACNA1C-210ENST00000399606 H3BPC8 53 aa7.53□□□□□ -1.2
CACNA1C-210ENST00000399606 DOPEY1Q5JWR5 2465 aa7.52□□□□□ -1.2
CACNA1C-210ENST00000399606 TRAV22A0A0B4J277 110 aa7.52□□□□□ -1.21
CACNA1C-210ENST00000399606 C8orf17Q9NRJ1 99 aa7.51□□□□□ -1.21
CACNA1C-210ENST00000399606 IGLV5-48A0A075B6I7 105 aa7.51□□□□□ -1.21
CACNA1C-210ENST00000399606 IGLV5-45A0A087WSX0 123 aa7.51□□□□□ -1.21
CACNA1C-210ENST00000399606 DSCR10P59022 87 aa7.51□□□□□ -1.21
CACNA1C-210ENST00000399606 IGLV5-39A0A0G2JS06 123 aa7.5□□□□□ -1.21
CACNA1C-210ENST00000399606 K7EQZ3 153 aa7.5□□□□□ -1.21
CACNA1C-210ENST00000399606 Q6ZQT0 140 aa7.5□□□□□ -1.21
CACNA1C-210ENST00000399606 LINC00528Q8N1L1 170 aa7.49□□□□□ -1.21
CACNA1C-210ENST00000399606 MIR22HGQ0VDD5 57 aa7.49□□□□□ -1.21
CACNA1C-210ENST00000399606 TLX1NBP0CAT3 122 aa7.48□□□□□ -1.21
CACNA1C-210ENST00000399606 H3BNG1 76 aa7.48□□□□□ -1.21
CACNA1C-210ENST00000399606 C11orf72Q8NBR9 251 aa7.48□□□□□ -1.21
CACNA1C-210ENST00000399606 XIRP2A4UGR9 3374 aa7.47□□□□□ -1.21
CACNA1C-210ENST00000399606 KRTAP10-11P60412 298 aa7.47□□□□□ -1.21
CACNA1C-210ENST00000399606 OBSCN-AS1Q96MR7 158 aa7.46□□□□□ -1.21
CACNA1C-210ENST00000399606 LINC00483Q53H64 154 aa7.46□□□□□ -1.22
CACNA1C-210ENST00000399606 A8MUN3 132 aa7.45□□□□□ -1.22
CACNA1C-210ENST00000399606 ST20-AS1Q8NBB2 130 aa7.45□□□□□ -1.22
CACNA1C-210ENST00000399606 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
CACNA1C-210ENST00000399606 WDR87Q6ZQQ6 2873 aa7.45□□□□□ -1.22
CACNA1C-210ENST00000399606 ERC2-IT1O76042 136 aa7.45□□□□□ -1.22
CACNA1C-210ENST00000399606 LAMA3Q16787 3333 aa7.45□□□□□ -1.22
CACNA1C-210ENST00000399606 A0A1B0GW54 56 aa7.44□□□□□ -1.22
CACNA1C-210ENST00000399606 LINC00476Q8WZB0 136 aa7.44□□□□□ -1.22
CACNA1C-210ENST00000399606 ANKHD1Q8IWZ3 2542 aaKnown RBP7.44□□□□□ -1.22
CACNA1C-210ENST00000399606 KTN1-AS1Q86SY8 53 aa7.43□□□□□ -1.22
CACNA1C-210ENST00000399606 COA5Q86WW8 74 aa7.43□□□□□ -1.22
CACNA1C-210ENST00000399606 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
CACNA1C-210ENST00000399606 Q6ZSA8 131 aa7.43□□□□□ -1.22
CACNA1C-210ENST00000399606 ELOF1P60002 83 aaKnown RBP7.43□□□□□ -1.22
CACNA1C-210ENST00000399606 PLAC4Q8WY50 150 aa7.43□□□□□ -1.22
CACNA1C-210ENST00000399606 Q8NAQ8 132 aa7.42□□□□□ -1.22
CACNA1C-210ENST00000399606 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
CACNA1C-210ENST00000399606 LOC101927531A0A1B0GV80 90 aa7.41□□□□□ -1.22
CACNA1C-210ENST00000399606 NAV2Q8IVL1 2488 aa7.41□□□□□ -1.22
CACNA1C-210ENST00000399606 PLXNB1O43157 2135 aa7.4□□□□□ -1.22
CACNA1C-210ENST00000399606 FAM168BA1KXE4 195 aa7.4□□□□□ -1.22
CACNA1C-210ENST00000399606 CACNA1AO00555 2505 aa7.4□□□□□ -1.22
CACNA1C-210ENST00000399606 A0A087WTM6 91 aa7.4□□□□□ -1.22
CACNA1C-210ENST00000399606 Q8N1X5 172 aa7.4□□□□□ -1.22
CACNA1C-210ENST00000399606 LRRK2Q5S007 2527 aa7.4□□□□□ -1.22
CACNA1C-210ENST00000399606 LOC110117498A0A087WWA1 95 aa7.4□□□□□ -1.23
CACNA1C-210ENST00000399606 TTC28Q96AY4 2481 aa7.39□□□□□ -1.23
CACNA1C-210ENST00000399606 UQCR11O14957 56 aa7.39□□□□□ -1.23
CACNA1C-210ENST00000399606 LITAFQ99732 161 aa7.38□□□□□ -1.23
CACNA1C-210ENST00000399606 CYP4F30PQ9H0H9 118 aa7.37□□□□□ -1.23
CACNA1C-210ENST00000399606 Q6ZRX8 168 aa7.37□□□□□ -1.23
CACNA1C-210ENST00000399606 IGLV1-50A0A075B6I6 118 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms