RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 TRAV13-2A0A0B4J235 113 aa7.9□□□□□ -1.14
ITSN1-211ENST00000399355 MRPL23Q16540 153 aaKnown RBP7.9□□□□□ -1.14
ITSN1-211ENST00000399355 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.15
ITSN1-211ENST00000399355 A0A0J9YWU9 116 aa7.89□□□□□ -1.15
ITSN1-211ENST00000399355 CASC10Q5T4H9 136 aa7.89□□□□□ -1.15
ITSN1-211ENST00000399355 KRTAP24-1Q3LI83 254 aa7.89□□□□□ -1.15
ITSN1-211ENST00000399355 CD164L2Q6UWJ8 174 aa7.89□□□□□ -1.15
ITSN1-211ENST00000399355 KPRPQ5T749 579 aaPredicted RBP7.88□□□□□ -1.15
ITSN1-211ENST00000399355 LYPD5Q6UWN5 251 aa7.88□□□□□ -1.15
ITSN1-211ENST00000399355 SPART-AS1P0CW21 52 aa7.87□□□□□ -1.15
ITSN1-211ENST00000399355 S100A7L2Q5SY68 101 aa7.87□□□□□ -1.15
ITSN1-211ENST00000399355 A0A1B0GUV1 79 aa7.87□□□□□ -1.15
ITSN1-211ENST00000399355 Q8IZM0 81 aa7.87□□□□□ -1.15
ITSN1-211ENST00000399355 C6orf48Q9UBA6 75 aa7.87□□□□□ -1.15
ITSN1-211ENST00000399355 CMC4P56277 68 aaPredicted RBP7.86□□□□□ -1.15
ITSN1-211ENST00000399355 ESRGQ1W209 222 aa7.86□□□□□ -1.15
ITSN1-211ENST00000399355 APOC4P55056 127 aa7.86□□□□□ -1.15
ITSN1-211ENST00000399355 TRACP01848 142 aa7.85□□□□□ -1.15
ITSN1-211ENST00000399355 SCXQ7RTU7 201 aa7.85□□□□□ -1.15
ITSN1-211ENST00000399355 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
ITSN1-211ENST00000399355 LYRM9A8MSI8 78 aa7.85□□□□□ -1.15
ITSN1-211ENST00000399355 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.84□□□□□ -1.15
ITSN1-211ENST00000399355 HIST1H4AP62805 103 aaKnown RBP7.83□□□□□ -1.16
ITSN1-211ENST00000399355 Q6ZRU5 148 aa7.83□□□□□ -1.16
ITSN1-211ENST00000399355 IGKV2D-24A0A075B6R9 120 aa7.83□□□□□ -1.16
ITSN1-211ENST00000399355 Q6ZQY7 126 aa7.82□□□□□ -1.16
ITSN1-211ENST00000399355 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
ITSN1-211ENST00000399355 FAM168BA1KXE4 195 aa7.82□□□□□ -1.16
ITSN1-211ENST00000399355 C3orf22Q8N5N4 141 aa7.82□□□□□ -1.16
ITSN1-211ENST00000399355 Q8N814 137 aa7.82□□□□□ -1.16
ITSN1-211ENST00000399355 DNAH3Q8TD57 4116 aa7.81□□□□□ -1.16
ITSN1-211ENST00000399355 A0A0G2JQZ4 141 aa7.81□□□□□ -1.16
ITSN1-211ENST00000399355 A0A1W2PNN7 141 aa7.81□□□□□ -1.16
ITSN1-211ENST00000399355 M0QXV9 152 aa7.81□□□□□ -1.16
ITSN1-211ENST00000399355 DEFB121Q5J5C9 76 aa7.81□□□□□ -1.16
ITSN1-211ENST00000399355 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
ITSN1-211ENST00000399355 SMIM9A6NGZ8 99 aa7.8□□□□□ -1.16
ITSN1-211ENST00000399355 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
ITSN1-211ENST00000399355 FUSP35637 526 aaKnown RBP eCLIP7.8□□□□□ -1.16
ITSN1-211ENST00000399355 DNHD1Q96M86 4753 aa7.8□□□□□ -1.16
ITSN1-211ENST00000399355 PRKDCP78527 4128 aaKnown RBP7.8□□□□□ -1.16
ITSN1-211ENST00000399355 PLECQ15149 4684 aaKnown RBP7.8□□□□□ -1.16
ITSN1-211ENST00000399355 MIFP14174 115 aa7.8□□□□□ -1.16
ITSN1-211ENST00000399355 LELP1Q5T871 98 aa7.8□□□□□ -1.16
ITSN1-211ENST00000399355 DEFB105AQ8NG35 78 aa7.8□□□□□ -1.16
ITSN1-211ENST00000399355 CAMK2N2Q96S95 79 aa7.8□□□□□ -1.16
ITSN1-211ENST00000399355 ORMDL1Q9P0S3 153 aa7.79□□□□□ -1.16
ITSN1-211ENST00000399355 LAMTOR3Q9UHA4 124 aa7.79□□□□□ -1.16
ITSN1-211ENST00000399355 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
ITSN1-211ENST00000399355 FRAS1Q86XX4 4008 aa7.78□□□□□ -1.16
ITSN1-211ENST00000399355 KMT2AQ03164 3969 aa7.78□□□□□ -1.16
ITSN1-211ENST00000399355 TRAV23DV6A0A075B6W5 121 aa7.78□□□□□ -1.16
ITSN1-211ENST00000399355 Q6ZRP5 223 aa7.78□□□□□ -1.16
ITSN1-211ENST00000399355 Q8N9L7 120 aa7.78□□□□□ -1.16
ITSN1-211ENST00000399355 COPS9Q8WXC6 57 aa7.78□□□□□ -1.16
ITSN1-211ENST00000399355 DEFB131BA0A096LNP1 70 aa7.77□□□□□ -1.17
ITSN1-211ENST00000399355 ZNF561-AS1K7EIQ3 104 aa7.77□□□□□ -1.17
ITSN1-211ENST00000399355 C15orf56Q8N910 161 aa7.77□□□□□ -1.17
ITSN1-211ENST00000399355 TMEM126AQ9H061 195 aa7.77□□□□□ -1.17
ITSN1-211ENST00000399355 LINC01561Q8N1V8 128 aa7.76□□□□□ -1.17
ITSN1-211ENST00000399355 LINC01600Q96MT4 127 aa7.76□□□□□ -1.17
ITSN1-211ENST00000399355 PRR34Q9NV39 138 aa7.76□□□□□ -1.17
ITSN1-211ENST00000399355 C9orf153Q5TBE3 101 aa7.75□□□□□ -1.17
ITSN1-211ENST00000399355 SERTAD4-AS1Q5TG53 156 aa7.75□□□□□ -1.17
ITSN1-211ENST00000399355 FAM240AA0A1B0GVK7 77 aa7.75□□□□□ -1.17
ITSN1-211ENST00000399355 H0YGX0 51 aa7.74□□□□□ -1.17
ITSN1-211ENST00000399355 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
ITSN1-211ENST00000399355 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
ITSN1-211ENST00000399355 STARD9Q9P2P6 4700 aa7.73□□□□□ -1.17
ITSN1-211ENST00000399355 TRBV7-7A0A0K0K1E9 115 aa7.73□□□□□ -1.17
ITSN1-211ENST00000399355 LOC107984640A0A0U1RRK4 108 aa7.73□□□□□ -1.17
ITSN1-211ENST00000399355 HAMPP81172 84 aa7.73□□□□□ -1.17
ITSN1-211ENST00000399355 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
ITSN1-211ENST00000399355 LINC00575Q6W349 94 aa7.73□□□□□ -1.17
ITSN1-211ENST00000399355 C11orf45Q8TAV5 145 aa7.73□□□□□ -1.17
ITSN1-211ENST00000399355 INAFM2P0DMQ5 153 aa7.72□□□□□ -1.17
ITSN1-211ENST00000399355 A0A1B0GX51 115 aa7.72□□□□□ -1.17
ITSN1-211ENST00000399355 FBN3Q75N90 2809 aa7.71□□□□□ -1.18
ITSN1-211ENST00000399355 C1orf43Q9BWL3 253 aa7.7□□□□□ -1.18
ITSN1-211ENST00000399355 C3orf84H3BNL1 204 aa7.7□□□□□ -1.18
ITSN1-211ENST00000399355 ZNF73O43830 326 aaPredicted RBP7.69□□□□□ -1.18
ITSN1-211ENST00000399355 IGLV6-57P01721 117 aa7.68□□□□□ -1.18
ITSN1-211ENST00000399355 OBSCN-AS1Q96MR7 158 aa7.68□□□□□ -1.18
ITSN1-211ENST00000399355 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.68□□□□□ -1.18
ITSN1-211ENST00000399355 VPREB1P12018 145 aa7.68□□□□□ -1.18
ITSN1-211ENST00000399355 LINC00588Q9Y4M8 146 aa7.68□□□□□ -1.18
ITSN1-211ENST00000399355 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
ITSN1-211ENST00000399355 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
ITSN1-211ENST00000399355 CCKP06307 115 aa7.68□□□□□ -1.18
ITSN1-211ENST00000399355 FAM19A5Q7Z5A7 132 aaPredicted RBP7.67□□□□□ -1.18
ITSN1-211ENST00000399355 Q6Q795 121 aa7.67□□□□□ -1.18
ITSN1-211ENST00000399355 KRTAP1-5Q9BYS1 174 aa7.67□□□□□ -1.18
ITSN1-211ENST00000399355 RBM3P98179 157 aaKnown RBP7.66□□□□□ -1.18
ITSN1-211ENST00000399355 COX17Q14061 63 aa7.66□□□□□ -1.18
ITSN1-211ENST00000399355 USP17L23D6RBM5 183 aa7.66□□□□□ -1.18
ITSN1-211ENST00000399355 KRTAP7-1Q8IUC3 87 aa7.65□□□□□ -1.18
ITSN1-211ENST00000399355 TMEM256-PLSCR3K7ERE1 68 aa7.65□□□□□ -1.18
ITSN1-211ENST00000399355 NDUFC2O95298 119 aa7.65□□□□□ -1.18
ITSN1-211ENST00000399355 DIRC1Q969H9 104 aa7.65□□□□□ -1.18
ITSN1-211ENST00000399355 C2orf48Q96LS8 159 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms