RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 FAM229AH3BQW9 127 aa11.23□□□□□ -0.61
SMIM11A-202ENST00000399295 C2orf82Q6UX34 121 aa11.23□□□□□ -0.61
SMIM11A-202ENST00000399295 SCXQ7RTU7 201 aa11.23□□□□□ -0.61
SMIM11A-202ENST00000399295 LINC00526Q96FQ7 95 aa11.23□□□□□ -0.61
SMIM11A-202ENST00000399295 ERG28Q9UKR5 140 aa11.23□□□□□ -0.61
SMIM11A-202ENST00000399295 SMIM13P0DJ93 91 aa11.22□□□□□ -0.61
SMIM11A-202ENST00000399295 PTTG1IPP53801 180 aa11.22□□□□□ -0.61
SMIM11A-202ENST00000399295 BATFQ16520 125 aa11.22□□□□□ -0.61
SMIM11A-202ENST00000399295 PPDPFQ9H3Y8 114 aa11.22□□□□□ -0.61
SMIM11A-202ENST00000399295 TRBV30A0A0K0K1B3 111 aa11.21□□□□□ -0.61
SMIM11A-202ENST00000399295 A6NDN8 102 aa11.21□□□□□ -0.61
SMIM11A-202ENST00000399295 RPL24P83731 157 aaKnown RBP11.21□□□□□ -0.61
SMIM11A-202ENST00000399295 ADAMTSL4-AS1Q5T5F5 129 aa11.21□□□□□ -0.61
SMIM11A-202ENST00000399295 CAMK2N2Q96S95 79 aa11.21□□□□□ -0.61
SMIM11A-202ENST00000399295 LINC00158P58513 81 aa11.2□□□□□ -0.62
SMIM11A-202ENST00000399295 COL5A1-AS1Q5SY13 56 aa11.19□□□□□ -0.62
SMIM11A-202ENST00000399295 Q5VSD8 79 aa11.19□□□□□ -0.62
SMIM11A-202ENST00000399295 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
SMIM11A-202ENST00000399295 CIRBP-AS1Q8TBR5 109 aa11.19□□□□□ -0.62
SMIM11A-202ENST00000399295 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.19□□□□□ -0.62
SMIM11A-202ENST00000399295 ABCA13Q86UQ4 5058 aa11.18□□□□□ -0.62
SMIM11A-202ENST00000399295 FXYD2P54710 66 aa11.18□□□□□ -0.62
SMIM11A-202ENST00000399295 SYCNQ0VAF6 134 aa11.18□□□□□ -0.62
SMIM11A-202ENST00000399295 MUSTN1Q8IVN3 82 aa11.18□□□□□ -0.62
SMIM11A-202ENST00000399295 CARD19Q96LW7 228 aa11.18□□□□□ -0.62
SMIM11A-202ENST00000399295 PANO1I0J062 215 aa11.17□□□□□ -0.62
SMIM11A-202ENST00000399295 PFN2P35080 140 aa11.17□□□□□ -0.62
SMIM11A-202ENST00000399295 LINC00308Q8TCZ7 52 aa11.17□□□□□ -0.62
SMIM11A-202ENST00000399295 A0A0U1RRA0 63 aa11.16□□□□□ -0.62
SMIM11A-202ENST00000399295 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
SMIM11A-202ENST00000399295 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
SMIM11A-202ENST00000399295 MIR7-3HGQ8N6C7 128 aa11.16□□□□□ -0.62
SMIM11A-202ENST00000399295 DPH3Q96FX2 82 aa11.16□□□□□ -0.62
SMIM11A-202ENST00000399295 PKIGQ9Y2B9 76 aa11.16□□□□□ -0.62
SMIM11A-202ENST00000399295 DAND5Q8N907 189 aa11.15□□□□□ -0.62
SMIM11A-202ENST00000399295 C6orf48Q9UBA6 75 aa11.15□□□□□ -0.62
SMIM11A-202ENST00000399295 PLA2G1BP04054 148 aaKnown RBP11.14□□□□□ -0.63
SMIM11A-202ENST00000399295 CHTF8P0CG12 524 aa11.14□□□□□ -0.63
SMIM11A-202ENST00000399295 Q6ZRU5 148 aa11.14□□□□□ -0.63
SMIM11A-202ENST00000399295 LINC00528Q8N1L1 170 aa11.14□□□□□ -0.63
SMIM11A-202ENST00000399295 A0A1B0GWB2 263 aa11.13□□□□□ -0.63
SMIM11A-202ENST00000399295 A4D1N5 150 aa11.13□□□□□ -0.63
SMIM11A-202ENST00000399295 NHP2Q9NX24 153 aaKnown RBP11.13□□□□□ -0.63
SMIM11A-202ENST00000399295 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
SMIM11A-202ENST00000399295 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
SMIM11A-202ENST00000399295 SPACA4Q8TDM5 124 aa11.12□□□□□ -0.63
SMIM11A-202ENST00000399295 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
SMIM11A-202ENST00000399295 NPC2P61916 151 aa11.11□□□□□ -0.63
SMIM11A-202ENST00000399295 C9orf116Q5BN46 136 aaPredicted RBP11.11□□□□□ -0.63
SMIM11A-202ENST00000399295 VPS13BQ7Z7G8 4022 aa11.1□□□□□ -0.63
SMIM11A-202ENST00000399295 A0A0B4J2C4 111 aa11.1□□□□□ -0.63
SMIM11A-202ENST00000399295 A0A087WYN8 130 aa11.09□□□□□ -0.63
SMIM11A-202ENST00000399295 A0A096LNI7 61 aa11.09□□□□□ -0.63
SMIM11A-202ENST00000399295 NDUFC2-KCTD14E9PQ53 114 aa11.09□□□□□ -0.63
SMIM11A-202ENST00000399295 INAFM2P0DMQ5 153 aa11.09□□□□□ -0.63
SMIM11A-202ENST00000399295 SOSTDC1Q6X4U4 206 aa11.09□□□□□ -0.63
SMIM11A-202ENST00000399295 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
SMIM11A-202ENST00000399295 TLX1NBP0CAT3 122 aa11.08□□□□□ -0.64
SMIM11A-202ENST00000399295 CFC1BP0CG36 223 aa11.08□□□□□ -0.64
SMIM11A-202ENST00000399295 CFC1P0CG37 223 aa11.08□□□□□ -0.64
SMIM11A-202ENST00000399295 RAB37Q96AX2 223 aa11.08□□□□□ -0.64
SMIM11A-202ENST00000399295 SND1-IT1Q9HBX3 110 aa11.08□□□□□ -0.64
SMIM11A-202ENST00000399295 LINC00474Q9P2X8 69 aa11.08□□□□□ -0.64
SMIM11A-202ENST00000399295 SRRM2Q9UQ35 2752 aaKnown RBP11.08□□□□□ -0.64
SMIM11A-202ENST00000399295 EIF4EBP3O60516 100 aaPredicted RBP11.06□□□□□ -0.64
SMIM11A-202ENST00000399295 PLAC8Q9NZF1 115 aa11.06□□□□□ -0.64
SMIM11A-202ENST00000399295 PRO1854Q9UHT4 67 aa11.06□□□□□ -0.64
SMIM11A-202ENST00000399295 TAX1BP3O14907 124 aa11.05□□□□□ -0.64
SMIM11A-202ENST00000399295 NDUFC2O95298 119 aa11.05□□□□□ -0.64
SMIM11A-202ENST00000399295 GAGE2BQ13066 116 aa11.05□□□□□ -0.64
SMIM11A-202ENST00000399295 K7ERJ3 54 aa11.04□□□□□ -0.64
SMIM11A-202ENST00000399295 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
SMIM11A-202ENST00000399295 TRAV13-2A0A0B4J235 113 aa11.02□□□□□ -0.65
SMIM11A-202ENST00000399295 C9orf118A6NHY6 69 aa11.02□□□□□ -0.65
SMIM11A-202ENST00000399295 RPL37AP61513 92 aaKnown RBP11.01□□□□□ -0.65
SMIM11A-202ENST00000399295 Q6ZRP5 223 aa11□□□□□ -0.65
SMIM11A-202ENST00000399295 KRTAP10-4P60372 401 aaPredicted RBP10.99□□□□□ -0.65
SMIM11A-202ENST00000399295 GAGE2EQ4V326 116 aa10.98□□□□□ -0.65
SMIM11A-202ENST00000399295 C7orf33Q8WU49 177 aa10.98□□□□□ -0.65
SMIM11A-202ENST00000399295 XAGE1AQ9HD64 81 aa10.98□□□□□ -0.65
SMIM11A-202ENST00000399295 GAGE2DQ9UEU5 116 aa10.98□□□□□ -0.65
SMIM11A-202ENST00000399295 IGKV2-28A0A075B6P5 120 aa10.97□□□□□ -0.65
SMIM11A-202ENST00000399295 IGKV2D-28P01615 120 aa10.97□□□□□ -0.65
SMIM11A-202ENST00000399295 FLG2Q5D862 2391 aaPredicted RBP10.97□□□□□ -0.65
SMIM11A-202ENST00000399295 TRBV10-2A0A0K0K1G8 114 aa10.96□□□□□ -0.65
SMIM11A-202ENST00000399295 H3BUT2 72 aa10.96□□□□□ -0.65
SMIM11A-202ENST00000399295 TSPAN13O95857 204 aa10.96□□□□□ -0.65
SMIM11A-202ENST00000399295 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
SMIM11A-202ENST00000399295 PLA2G2DQ9UNK4 145 aa10.96□□□□□ -0.65
SMIM11A-202ENST00000399295 A0A1W2PNN7 141 aa10.95□□□□□ -0.66
SMIM11A-202ENST00000399295 Q1RN00 199 aa10.95□□□□□ -0.66
SMIM11A-202ENST00000399295 LYRM7Q5U5X0 104 aa10.94□□□□□ -0.66
SMIM11A-202ENST00000399295 LINC00337Q8N6G1 96 aa10.94□□□□□ -0.66
SMIM11A-202ENST00000399295 A0A1W2PPM0 123 aa10.93□□□□□ -0.66
SMIM11A-202ENST00000399295 C9orf129Q5T035 196 aaKnown RBP10.93□□□□□ -0.66
SMIM11A-202ENST00000399295 TMEM126AQ9H061 195 aa10.93□□□□□ -0.66
SMIM11A-202ENST00000399295 A0A1B0GV90 55 aa10.92□□□□□ -0.66
SMIM11A-202ENST00000399295 H7C2G1 150 aa10.92□□□□□ -0.66
SMIM11A-202ENST00000399295 VPREB1P12018 145 aa10.92□□□□□ -0.66
SMIM11A-202ENST00000399295 FABP2P12104 132 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms