RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 MKI67P46013 3256 aaKnown RBP6.72□□□□□ -1.33
SMAD9-203ENST00000399275 Q1T7F1 81 aa6.72□□□□□ -1.33
SMAD9-203ENST00000399275 A0A0A0MQY5 61 aa6.71□□□□□ -1.33
SMAD9-203ENST00000399275 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.34
SMAD9-203ENST00000399275 REG3GQ6UW15 175 aa6.71□□□□□ -1.34
SMAD9-203ENST00000399275 C11orf45Q8TAV5 145 aa6.71□□□□□ -1.34
SMAD9-203ENST00000399275 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
SMAD9-203ENST00000399275 Q6ZSN1 163 aa6.7□□□□□ -1.34
SMAD9-203ENST00000399275 C6orf223Q8N319 242 aa6.7□□□□□ -1.34
SMAD9-203ENST00000399275 LITAFQ99732 161 aa6.69□□□□□ -1.34
SMAD9-203ENST00000399275 KIAA0087Q14695 138 aa6.69□□□□□ -1.34
SMAD9-203ENST00000399275 FAM208BQ5VWN6 2430 aa6.69□□□□□ -1.34
SMAD9-203ENST00000399275 KLK9Q2XQG4 91 aa6.68□□□□□ -1.34
SMAD9-203ENST00000399275 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.67□□□□□ -1.34
SMAD9-203ENST00000399275 LELP1Q5T871 98 aa6.66□□□□□ -1.34
SMAD9-203ENST00000399275 IGLV4-60A0A075B6I1 120 aa6.66□□□□□ -1.34
SMAD9-203ENST00000399275 TRBV7-4A0A0J9YYF1 115 aa6.66□□□□□ -1.34
SMAD9-203ENST00000399275 PRAC1Q96KF2 57 aa6.66□□□□□ -1.34
SMAD9-203ENST00000399275 CIRBP-AS1Q8TBR5 109 aa6.65□□□□□ -1.35
SMAD9-203ENST00000399275 A0A1B0GUV1 79 aa6.65□□□□□ -1.35
SMAD9-203ENST00000399275 Q8NBF4 154 aa6.65□□□□□ -1.35
SMAD9-203ENST00000399275 ODF3L2Q3SX64 289 aa6.64□□□□□ -1.35
SMAD9-203ENST00000399275 ANKHD1Q8IWZ3 2542 aaKnown RBP6.64□□□□□ -1.35
SMAD9-203ENST00000399275 LAMA3Q16787 3333 aa6.64□□□□□ -1.35
SMAD9-203ENST00000399275 RIF1Q5UIP0 2472 aaKnown RBP6.64□□□□□ -1.35
SMAD9-203ENST00000399275 C18orf65Q6ZTR6 163 aa6.63□□□□□ -1.35
SMAD9-203ENST00000399275 ZFHX2Q9C0A1 2572 aaPredicted RBP6.63□□□□□ -1.35
SMAD9-203ENST00000399275 CSPG4Q6UVK1 2322 aa6.63□□□□□ -1.35
SMAD9-203ENST00000399275 CHD9Q3L8U1 2897 aa6.62□□□□□ -1.35
SMAD9-203ENST00000399275 PCSK5Q92824 1860 aa6.62□□□□□ -1.35
SMAD9-203ENST00000399275 LINC00313P59037 77 aa6.62□□□□□ -1.35
SMAD9-203ENST00000399275 C7orf33Q8WU49 177 aa6.62□□□□□ -1.35
SMAD9-203ENST00000399275 NUPR2A6NF83 97 aa6.62□□□□□ -1.35
SMAD9-203ENST00000399275 LAMA2P24043 3122 aaKnown RBP6.61□□□□□ -1.35
SMAD9-203ENST00000399275 CDH23Q9H251 3354 aa6.61□□□□□ -1.35
SMAD9-203ENST00000399275 IGHV3OR16-9A0A0B4J2B5 98 aa6.6□□□□□ -1.35
SMAD9-203ENST00000399275 A8MWP4 228 aa6.6□□□□□ -1.35
SMAD9-203ENST00000399275 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
SMAD9-203ENST00000399275 K7EQZ3 153 aa6.59□□□□□ -1.35
SMAD9-203ENST00000399275 PTPRBP23467 1997 aa6.59□□□□□ -1.35
SMAD9-203ENST00000399275 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
SMAD9-203ENST00000399275 SPG11Q96JI7 2443 aa6.59□□□□□ -1.35
SMAD9-203ENST00000399275 C9orf129Q5T035 196 aaKnown RBP6.59□□□□□ -1.35
SMAD9-203ENST00000399275 DEFB131BA0A096LNP1 70 aa6.58□□□□□ -1.36
SMAD9-203ENST00000399275 EPM2AB3EWF7 344 aa6.58□□□□□ -1.36
SMAD9-203ENST00000399275 APLNQ9ULZ1 77 aa6.58□□□□□ -1.36
SMAD9-203ENST00000399275 DOPEY1Q5JWR5 2465 aa6.58□□□□□ -1.36
SMAD9-203ENST00000399275 Q75L30 129 aa6.58□□□□□ -1.36
SMAD9-203ENST00000399275 SPANXA2-OT1Q8N9U9 137 aa6.58□□□□□ -1.36
SMAD9-203ENST00000399275 UNC80Q8N2C7 3258 aa6.58□□□□□ -1.36
SMAD9-203ENST00000399275 LINC00588Q9Y4M8 146 aa6.58□□□□□ -1.36
SMAD9-203ENST00000399275 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
SMAD9-203ENST00000399275 MOBPQ13875 183 aa6.55□□□□□ -1.36
SMAD9-203ENST00000399275 RANBP2P49792 3224 aaKnown RBP6.55□□□□□ -1.36
SMAD9-203ENST00000399275 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
SMAD9-203ENST00000399275 LINC00476Q8WZB0 136 aa6.54□□□□□ -1.36
SMAD9-203ENST00000399275 DNAH14Q0VDD8 3507 aa6.54□□□□□ -1.36
SMAD9-203ENST00000399275 IGLV1-51P01701 117 aa6.54□□□□□ -1.36
SMAD9-203ENST00000399275 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
SMAD9-203ENST00000399275 A0A1W2PPR1 153 aa6.53□□□□□ -1.36
SMAD9-203ENST00000399275 C16orf90A8MZG2 172 aa6.53□□□□□ -1.36
SMAD9-203ENST00000399275 LY6G6DO95868 133 aa6.53□□□□□ -1.36
SMAD9-203ENST00000399275 A0A0C4DFX4 3053 aa6.53□□□□□ -1.36
SMAD9-203ENST00000399275 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
SMAD9-203ENST00000399275 TTC28Q96AY4 2481 aa6.51□□□□□ -1.37
SMAD9-203ENST00000399275 FAM229BQ4G0N7 80 aa6.5□□□□□ -1.37
SMAD9-203ENST00000399275 SONP18583 2426 aaKnown RBP6.5□□□□□ -1.37
SMAD9-203ENST00000399275 Q6ZRP5 223 aa6.5□□□□□ -1.37
SMAD9-203ENST00000399275 TRANK1O15050 2925 aa6.49□□□□□ -1.37
SMAD9-203ENST00000399275 FAM229AH3BQW9 127 aa6.49□□□□□ -1.37
SMAD9-203ENST00000399275 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
SMAD9-203ENST00000399275 COL27A1Q8IZC6 1860 aaPredicted RBP6.49□□□□□ -1.37
SMAD9-203ENST00000399275 C22orf24Q9Y442 160 aa6.49□□□□□ -1.37
SMAD9-203ENST00000399275 CSNK1G2-AS1Q8NCQ2 148 aa6.48□□□□□ -1.37
SMAD9-203ENST00000399275 XIRP2A4UGR9 3374 aa6.47□□□□□ -1.37
SMAD9-203ENST00000399275 ZNF575Q86XF7 245 aa6.47□□□□□ -1.37
SMAD9-203ENST00000399275 ST20-AS1Q8NBB2 130 aa6.47□□□□□ -1.37
SMAD9-203ENST00000399275 J3QKU1 62 aa6.47□□□□□ -1.37
SMAD9-203ENST00000399275 Q8N9P0 234 aaPredicted RBP6.47□□□□□ -1.37
SMAD9-203ENST00000399275 Q5VV11 94 aa6.46□□□□□ -1.38
SMAD9-203ENST00000399275 PHF5AQ7RTV0 110 aaKnown RBP6.46□□□□□ -1.38
SMAD9-203ENST00000399275 C9orf163Q8N9P6 203 aa6.46□□□□□ -1.38
SMAD9-203ENST00000399275 LINC01556Q5JQF7 62 aa6.45□□□□□ -1.38
SMAD9-203ENST00000399275 C16orf95Q9H693 158 aa6.45□□□□□ -1.38
SMAD9-203ENST00000399275 Q6ZRX8 168 aa6.45□□□□□ -1.38
SMAD9-203ENST00000399275 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
SMAD9-203ENST00000399275 OXTP01178 125 aa6.44□□□□□ -1.38
SMAD9-203ENST00000399275 PIEZO2Q9H5I5 2752 aa6.44□□□□□ -1.38
SMAD9-203ENST00000399275 SZT2Q5T011 3432 aa6.44□□□□□ -1.38
SMAD9-203ENST00000399275 F8P00451 2351 aa6.44□□□□□ -1.38
SMAD9-203ENST00000399275 OBSCN-AS1Q96MR7 158 aa6.44□□□□□ -1.38
SMAD9-203ENST00000399275 LINC00167Q96N53 147 aa6.44□□□□□ -1.38
SMAD9-203ENST00000399275 IGLV6-57P01721 117 aa6.43□□□□□ -1.38
SMAD9-203ENST00000399275 CHTF8P0CG12 524 aa6.43□□□□□ -1.38
SMAD9-203ENST00000399275 OCR1Q9BZK8 76 aa6.43□□□□□ -1.38
SMAD9-203ENST00000399275 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
SMAD9-203ENST00000399275 PRR26Q8N8Z3 221 aa6.42□□□□□ -1.38
SMAD9-203ENST00000399275 FAM104AQ969W3 186 aa6.42□□□□□ -1.38
SMAD9-203ENST00000399275 GVQW2A0A096LPI5 108 aaPredicted RBP6.42□□□□□ -1.38
SMAD9-203ENST00000399275 PLA2G2DQ9UNK4 145 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms