RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 H0Y8G0 127 aa12.69□□□□□ -0.38
RUNX1-204ENST00000399237 RPL28P46779 137 aaKnown RBP12.69□□□□□ -0.38
RUNX1-204ENST00000399237 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
RUNX1-204ENST00000399237 TSPEAR-AS2P59090 65 aa12.68□□□□□ -0.38
RUNX1-204ENST00000399237 LEPROTL1O95214 131 aa12.67□□□□□ -0.38
RUNX1-204ENST00000399237 SFTA2Q6UW10 78 aa12.67□□□□□ -0.38
RUNX1-204ENST00000399237 ANAPC11Q9NYG5 84 aa12.67□□□□□ -0.38
RUNX1-204ENST00000399237 SMIM13P0DJ93 91 aa12.66□□□□□ -0.38
RUNX1-204ENST00000399237 LINC00158P58513 81 aa12.66□□□□□ -0.38
RUNX1-204ENST00000399237 PRLHP81277 87 aa12.65□□□□□ -0.38
RUNX1-204ENST00000399237 TMEM126AQ9H061 195 aa12.65□□□□□ -0.38
RUNX1-204ENST00000399237 M0R378 163 aa12.64□□□□□ -0.39
RUNX1-204ENST00000399237 RPL13AP40429 203 aaKnown RBP12.64□□□□□ -0.39
RUNX1-204ENST00000399237 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
RUNX1-204ENST00000399237 FABP4P15090 132 aa12.63□□□□□ -0.39
RUNX1-204ENST00000399237 UBE2AP49459 152 aa12.63□□□□□ -0.39
RUNX1-204ENST00000399237 RPL24P83731 157 aaKnown RBP12.63□□□□□ -0.39
RUNX1-204ENST00000399237 KRTAP13-2Q52LG2 175 aa12.61□□□□□ -0.39
RUNX1-204ENST00000399237 NDUFA12Q9UI09 145 aa12.61□□□□□ -0.39
RUNX1-204ENST00000399237 MIR7-3HGQ8N6C7 128 aa12.6□□□□□ -0.39
RUNX1-204ENST00000399237 MEIG1Q5JSS6 88 aa12.59□□□□□ -0.39
RUNX1-204ENST00000399237 FAM19A1Q7Z5A9 133 aa12.59□□□□□ -0.39
RUNX1-204ENST00000399237 LEPROTO15243 131 aa12.57□□□□□ -0.4
RUNX1-204ENST00000399237 HERV-K104P63124 156 aa12.57□□□□□ -0.4
RUNX1-204ENST00000399237 HSPB8Q9UJY1 196 aa12.57□□□□□ -0.4
RUNX1-204ENST00000399237 NCR3O14931 201 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BKO60814 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 DPM2O94777 84 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BJP06899 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 CRYGAP11844 174 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BOP23527 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 PLNP26678 52 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BBP33778 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BDP58876 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BCP62807 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST2H2BEQ16778 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.55□□□□□ -0.4
RUNX1-204ENST00000399237 BOD1L2Q8IYS8 172 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 DAND5Q8N907 189 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BHQ93079 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BNQ99877 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 HIST1H2BMQ99879 126 aa12.55□□□□□ -0.4
RUNX1-204ENST00000399237 MYMXA0A1B0GTQ4 84 aa12.54□□□□□ -0.4
RUNX1-204ENST00000399237 J3QQQ9 107 aa12.53□□□□□ -0.4
RUNX1-204ENST00000399237 IGKCP01834 107 aa12.53□□□□□ -0.4
RUNX1-204ENST00000399237 TYMSOSQ8TAI1 123 aa12.53□□□□□ -0.4
RUNX1-204ENST00000399237 PLEKHB2Q96CS7 222 aa12.52□□□□□ -0.41
RUNX1-204ENST00000399237 TSPAN13O95857 204 aa12.51□□□□□ -0.41
RUNX1-204ENST00000399237 MUC2Q02817 5179 aa12.5□□□□□ -0.41
RUNX1-204ENST00000399237 ATP6V1G1O75348 118 aa12.5□□□□□ -0.41
RUNX1-204ENST00000399237 PRR4Q16378 134 aa12.5□□□□□ -0.41
RUNX1-204ENST00000399237 FAM229BQ4G0N7 80 aa12.49□□□□□ -0.41
RUNX1-204ENST00000399237 LOC107984156A0A0G2JMH3 177 aa12.48□□□□□ -0.41
RUNX1-204ENST00000399237 TRBV10-3A0A0K0K1G6 114 aa12.48□□□□□ -0.41
RUNX1-204ENST00000399237 KRTAP4-16G5E9R7 235 aaPredicted RBP12.48□□□□□ -0.41
RUNX1-204ENST00000399237 SPRR1AP35321 89 aa12.48□□□□□ -0.41
RUNX1-204ENST00000399237 ARL17AQ8IVW1 177 aa12.48□□□□□ -0.41
RUNX1-204ENST00000399237 HIGD2AQ9BW72 106 aa12.48□□□□□ -0.41
RUNX1-204ENST00000399237 MAP1LC3CQ9BXW4 147 aa12.48□□□□□ -0.41
RUNX1-204ENST00000399237 PRYO14603 147 aa12.47□□□□□ -0.41
RUNX1-204ENST00000399237 EIF4EBP3O60516 100 aaPredicted RBP12.47□□□□□ -0.41
RUNX1-204ENST00000399237 HERVK_113P61574 105 aa12.46□□□□□ -0.41
RUNX1-204ENST00000399237 KCNQ1DNQ9H478 68 aa12.46□□□□□ -0.41
RUNX1-204ENST00000399237 IGKV2D-26A0A0A0MRZ7 120 aa12.45□□□□□ -0.42
RUNX1-204ENST00000399237 LINC00587B1AMM8 73 aa12.45□□□□□ -0.42
RUNX1-204ENST00000399237 SYS1-DBNDD2H3BUS1 97 aa12.45□□□□□ -0.42
RUNX1-204ENST00000399237 C3orf22Q8N5N4 141 aa12.45□□□□□ -0.42
RUNX1-204ENST00000399237 LGALS3P17931 250 aaKnown RBP12.44□□□□□ -0.42
RUNX1-204ENST00000399237 NMUP48645 174 aa12.44□□□□□ -0.42
RUNX1-204ENST00000399237 SOSTDC1Q6X4U4 206 aa12.44□□□□□ -0.42
RUNX1-204ENST00000399237 E9PLD3 99 aa12.43□□□□□ -0.42
RUNX1-204ENST00000399237 ADAMTSL4-AS1Q5T5F5 129 aa12.43□□□□□ -0.42
RUNX1-204ENST00000399237 LINC00337Q8N6G1 96 aa12.43□□□□□ -0.42
RUNX1-204ENST00000399237 SPRR4Q96PI1 79 aa12.43□□□□□ -0.42
RUNX1-204ENST00000399237 A0A0J9YXY3 114 aa12.42□□□□□ -0.42
RUNX1-204ENST00000399237 LINC01545Q5VT33 79 aa12.41□□□□□ -0.42
RUNX1-204ENST00000399237 SMCR5Q8TEV8 140 aa12.4□□□□□ -0.42
RUNX1-204ENST00000399237 NPC2P61916 151 aa12.39□□□□□ -0.43
RUNX1-204ENST00000399237 LINC00304Q8N9R0 145 aa12.39□□□□□ -0.43
RUNX1-204ENST00000399237 LITAFQ99732 161 aa12.38□□□□□ -0.43
RUNX1-204ENST00000399237 TRBV10-2A0A0K0K1G8 114 aa12.37□□□□□ -0.43
RUNX1-204ENST00000399237 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
RUNX1-204ENST00000399237 DDTP30046 118 aa12.37□□□□□ -0.43
RUNX1-204ENST00000399237 COA6Q5JTJ3 125 aaKnown RBP12.37□□□□□ -0.43
RUNX1-204ENST00000399237 RETNLBQ9BQ08 111 aa12.37□□□□□ -0.43
RUNX1-204ENST00000399237 ETDCA0A1B0GVM5 59 aa12.36□□□□□ -0.43
RUNX1-204ENST00000399237 B5MCH6 92 aa12.36□□□□□ -0.43
RUNX1-204ENST00000399237 TTTY13Q9BZ97 58 aa12.36□□□□□ -0.43
RUNX1-204ENST00000399237 SPANXB1Q9NS25 103 aaPredicted RBP12.36□□□□□ -0.43
RUNX1-204ENST00000399237 ERC2-IT1O76042 136 aa12.35□□□□□ -0.43
RUNX1-204ENST00000399237 PET117Q6UWS5 81 aa12.35□□□□□ -0.43
RUNX1-204ENST00000399237 NDUFC2O95298 119 aa12.34□□□□□ -0.43
RUNX1-204ENST00000399237 IGLV6-57P01721 117 aa12.34□□□□□ -0.43
RUNX1-204ENST00000399237 Q9BRP9 147 aa12.33□□□□□ -0.44
RUNX1-204ENST00000399237 PPDPFQ9H3Y8 114 aa12.33□□□□□ -0.44
RUNX1-204ENST00000399237 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
RUNX1-204ENST00000399237 ZNF706Q9Y5V0 76 aaPredicted RBP12.3□□□□□ -0.44
RUNX1-204ENST00000399237 LINC00483Q53H64 154 aa12.29□□□□□ -0.44
RUNX1-204ENST00000399237 KRTDAPP60985 99 aa12.28□□□□□ -0.44
RUNX1-204ENST00000399237 Q6ZRX8 168 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms