RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 UBE2V1Q13404 147 aa9.34□□□□□ -0.91
SEC13-208ENST00000397109 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
SEC13-208ENST00000397109 VAMP3Q15836 100 aa9.33□□□□□ -0.92
SEC13-208ENST00000397109 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.33□□□□□ -0.92
SEC13-208ENST00000397109 COX7A2LO14548 114 aa9.32□□□□□ -0.92
SEC13-208ENST00000397109 ZNF625Q96I27 306 aaPredicted RBP9.32□□□□□ -0.92
SEC13-208ENST00000397109 LITAFQ99732 161 aa9.32□□□□□ -0.92
SEC13-208ENST00000397109 PKIGQ9Y2B9 76 aa9.32□□□□□ -0.92
SEC13-208ENST00000397109 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
SEC13-208ENST00000397109 MALP21145 153 aa9.31□□□□□ -0.92
SEC13-208ENST00000397109 GTF2H5Q6ZYL4 71 aa9.31□□□□□ -0.92
SEC13-208ENST00000397109 COX7B2Q8TF08 81 aa9.31□□□□□ -0.92
SEC13-208ENST00000397109 DPH3Q96FX2 82 aa9.31□□□□□ -0.92
SEC13-208ENST00000397109 H3BUT2 72 aa9.3□□□□□ -0.92
SEC13-208ENST00000397109 A0A0B4J2C4 111 aa9.29□□□□□ -0.92
SEC13-208ENST00000397109 A0A1W2PPM0 123 aa9.29□□□□□ -0.92
SEC13-208ENST00000397109 PANO1I0J062 215 aa9.29□□□□□ -0.92
SEC13-208ENST00000397109 FABP2P12104 132 aa9.29□□□□□ -0.92
SEC13-208ENST00000397109 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
SEC13-208ENST00000397109 RAB37Q96AX2 223 aa9.29□□□□□ -0.92
SEC13-208ENST00000397109 APOMO95445 188 aa9.28□□□□□ -0.92
SEC13-208ENST00000397109 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
SEC13-208ENST00000397109 Q8IZM0 81 aa9.28□□□□□ -0.92
SEC13-208ENST00000397109 GAGE10A6NGK3 116 aa9.28□□□□□ -0.92
SEC13-208ENST00000397109 CXCL5P42830 114 aa9.28□□□□□ -0.92
SEC13-208ENST00000397109 SPACA4Q8TDM5 124 aa9.28□□□□□ -0.92
SEC13-208ENST00000397109 CARD19Q96LW7 228 aa9.28□□□□□ -0.92
SEC13-208ENST00000397109 PRSS2P07478 247 aa9.27□□□□□ -0.93
SEC13-208ENST00000397109 CFC1BP0CG36 223 aa9.27□□□□□ -0.93
SEC13-208ENST00000397109 CFC1P0CG37 223 aa9.27□□□□□ -0.93
SEC13-208ENST00000397109 SYCNQ0VAF6 134 aa9.27□□□□□ -0.93
SEC13-208ENST00000397109 LYRM7Q5U5X0 104 aa9.27□□□□□ -0.93
SEC13-208ENST00000397109 LINC00526Q96FQ7 95 aa9.27□□□□□ -0.93
SEC13-208ENST00000397109 PRO1854Q9UHT4 67 aa9.27□□□□□ -0.93
SEC13-208ENST00000397109 A0A087WYN8 130 aa9.26□□□□□ -0.93
SEC13-208ENST00000397109 A4D1N5 150 aa9.26□□□□□ -0.93
SEC13-208ENST00000397109 CHTF8P0CG12 524 aa9.26□□□□□ -0.93
SEC13-208ENST00000397109 RPL37AP61513 92 aaKnown RBP9.26□□□□□ -0.93
SEC13-208ENST00000397109 ADAMTSL4-AS1Q5T5F5 129 aa9.26□□□□□ -0.93
SEC13-208ENST00000397109 LINC00474Q9P2X8 69 aa9.26□□□□□ -0.93
SEC13-208ENST00000397109 DMBT1Q9UGM3 2413 aaPredicted RBP9.26□□□□□ -0.93
SEC13-208ENST00000397109 K7ERJ3 54 aa9.25□□□□□ -0.93
SEC13-208ENST00000397109 KRTAP10-4P60372 401 aaPredicted RBP9.25□□□□□ -0.93
SEC13-208ENST00000397109 C6orf226Q5I0X4 101 aa9.25□□□□□ -0.93
SEC13-208ENST00000397109 C2orf48Q96LS8 159 aa9.25□□□□□ -0.93
SEC13-208ENST00000397109 PLAC8Q9NZF1 115 aa9.25□□□□□ -0.93
SEC13-208ENST00000397109 K7EP34 96 aa9.24□□□□□ -0.93
SEC13-208ENST00000397109 MEIG1Q5JSS6 88 aa9.24□□□□□ -0.93
SEC13-208ENST00000397109 IGKV2-24A0A0C4DH68 120 aa9.23□□□□□ -0.93
SEC13-208ENST00000397109 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
SEC13-208ENST00000397109 TOMM7Q9P0U1 55 aa9.23□□□□□ -0.93
SEC13-208ENST00000397109 F8WDY8 70 aa9.22□□□□□ -0.93
SEC13-208ENST00000397109 COX17Q14061 63 aa9.22□□□□□ -0.93
SEC13-208ENST00000397109 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
SEC13-208ENST00000397109 SPCS1Q9Y6A9 102 aa9.22□□□□□ -0.93
SEC13-208ENST00000397109 MYCBP2O75592 4640 aa9.21□□□□□ -0.93
SEC13-208ENST00000397109 A0A096LNI7 61 aa9.21□□□□□ -0.93
SEC13-208ENST00000397109 SPAG11BQ08648 103 aa9.21□□□□□ -0.93
SEC13-208ENST00000397109 KIAA0087Q14695 138 aa9.21□□□□□ -0.93
SEC13-208ENST00000397109 Q6ZRU5 148 aa9.21□□□□□ -0.93
SEC13-208ENST00000397109 ERG28Q9UKR5 140 aa9.21□□□□□ -0.93
SEC13-208ENST00000397109 LOC107984640A0A0U1RRK4 108 aa9.21□□□□□ -0.94
SEC13-208ENST00000397109 C7orf33Q8WU49 177 aa9.21□□□□□ -0.94
SEC13-208ENST00000397109 TRBV20-1A0A075B6N2 111 aa9.2□□□□□ -0.94
SEC13-208ENST00000397109 TSPAN13O95857 204 aa9.2□□□□□ -0.94
SEC13-208ENST00000397109 CKS1BP61024 79 aa9.2□□□□□ -0.94
SEC13-208ENST00000397109 RNF151Q2KHN1 245 aa9.2□□□□□ -0.94
SEC13-208ENST00000397109 KRTAP29-1A8MX34 341 aaPredicted RBP9.18□□□□□ -0.94
SEC13-208ENST00000397109 J3QL48 77 aa9.18□□□□□ -0.94
SEC13-208ENST00000397109 LOC107984156A0A0G2JMH3 177 aa9.17□□□□□ -0.94
SEC13-208ENST00000397109 TRBV30A0A0K0K1B3 111 aa9.17□□□□□ -0.94
SEC13-208ENST00000397109 ARL17AQ8IVW1 177 aa9.17□□□□□ -0.94
SEC13-208ENST00000397109 LINC00158P58513 81 aa9.16□□□□□ -0.94
SEC13-208ENST00000397109 GAGE2BQ13066 116 aa9.16□□□□□ -0.94
SEC13-208ENST00000397109 NAA38Q9BRA0 125 aaKnown RBP9.16□□□□□ -0.94
SEC13-208ENST00000397109 F8W1H4 67 aa9.15□□□□□ -0.94
SEC13-208ENST00000397109 MIR7-3HGQ8N6C7 128 aa9.15□□□□□ -0.94
SEC13-208ENST00000397109 TRAV13-2A0A0B4J235 113 aa9.15□□□□□ -0.95
SEC13-208ENST00000397109 EIF4EBP3O60516 100 aaPredicted RBP9.15□□□□□ -0.95
SEC13-208ENST00000397109 OXTP01178 125 aa9.15□□□□□ -0.95
SEC13-208ENST00000397109 COX6CP09669 75 aa9.15□□□□□ -0.95
SEC13-208ENST00000397109 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
SEC13-208ENST00000397109 RPL18AQ02543 176 aaKnown RBP9.14□□□□□ -0.95
SEC13-208ENST00000397109 DAND5Q8N907 189 aa9.14□□□□□ -0.95
SEC13-208ENST00000397109 SCGB1C2P0DMR2 95 aa9.13□□□□□ -0.95
SEC13-208ENST00000397109 UNQ6190/PRO20217Q6UXQ8 127 aa9.13□□□□□ -0.95
SEC13-208ENST00000397109 SOSTDC1Q6X4U4 206 aa9.13□□□□□ -0.95
SEC13-208ENST00000397109 A0A0U1RRA0 63 aa9.12□□□□□ -0.95
SEC13-208ENST00000397109 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
SEC13-208ENST00000397109 PSMB2P49721 201 aa9.12□□□□□ -0.95
SEC13-208ENST00000397109 NPC2P61916 151 aa9.12□□□□□ -0.95
SEC13-208ENST00000397109 C10orf25Q5T742 122 aa9.12□□□□□ -0.95
SEC13-208ENST00000397109 C2orf82Q6UX34 121 aa9.12□□□□□ -0.95
SEC13-208ENST00000397109 NDUFC2O95298 119 aa9.11□□□□□ -0.95
SEC13-208ENST00000397109 Q1RN00 199 aa9.11□□□□□ -0.95
SEC13-208ENST00000397109 SND1-IT1Q9HBX3 110 aa9.11□□□□□ -0.95
SEC13-208ENST00000397109 C6orf48Q9UBA6 75 aa9.11□□□□□ -0.95
SEC13-208ENST00000397109 HERC1Q15751 4861 aa9.1□□□□□ -0.95
SEC13-208ENST00000397109 PFN2P35080 140 aa9.1□□□□□ -0.95
SEC13-208ENST00000397109 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms