RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 LINC00269Q8N2A0 174 aa16.45■□□□□ 0.22
CSNK1E-203ENST00000396832 EPM2AB3EWF7 344 aa16.43■□□□□ 0.22
CSNK1E-203ENST00000396832 M0R2N4 97 aa16.43■□□□□ 0.22
CSNK1E-203ENST00000396832 LINC01547P58512 204 aaPredicted RBP16.43■□□□□ 0.22
CSNK1E-203ENST00000396832 HAMPP81172 84 aa16.43■□□□□ 0.22
CSNK1E-203ENST00000396832 TRAV10A0A0B4J240 114 aa16.42■□□□□ 0.22
CSNK1E-203ENST00000396832 LINC00575Q6W349 94 aa16.42■□□□□ 0.22
CSNK1E-203ENST00000396832 BCE1O60756 84 aa16.42■□□□□ 0.22
CSNK1E-203ENST00000396832 LAMTOR3Q9UHA4 124 aa16.42■□□□□ 0.22
CSNK1E-203ENST00000396832 Q8NDZ9 215 aa16.41■□□□□ 0.22
CSNK1E-203ENST00000396832 SNURFQ9Y675 71 aa16.41■□□□□ 0.22
CSNK1E-203ENST00000396832 ANK3Q12955 4377 aaKnown RBP16.39■□□□□ 0.22
CSNK1E-203ENST00000396832 LINC00482Q8N8I6 264 aa16.39■□□□□ 0.21
CSNK1E-203ENST00000396832 MRAPQ8TCY5 172 aa16.39■□□□□ 0.21
CSNK1E-203ENST00000396832 LOC110117498A0A087WWA1 95 aa16.38■□□□□ 0.21
CSNK1E-203ENST00000396832 ZNF561-AS1K7EIQ3 104 aa16.38■□□□□ 0.21
CSNK1E-203ENST00000396832 ANGP03950 147 aaKnown RBP16.38■□□□□ 0.21
CSNK1E-203ENST00000396832 KLKP1Q107X0 134 aa16.38■□□□□ 0.21
CSNK1E-203ENST00000396832 Q6ZVQ6 151 aa16.38■□□□□ 0.21
CSNK1E-203ENST00000396832 RMI2Q96E14 147 aa16.38■□□□□ 0.21
CSNK1E-203ENST00000396832 COX17Q14061 63 aa16.37■□□□□ 0.21
CSNK1E-203ENST00000396832 KIAA0087Q14695 138 aa16.37■□□□□ 0.21
CSNK1E-203ENST00000396832 LINC00336Q6ZUF6 198 aa16.35■□□□□ 0.21
CSNK1E-203ENST00000396832 C6orf223Q8N319 242 aa16.35■□□□□ 0.21
CSNK1E-203ENST00000396832 A0A1B0GUV1 79 aa16.34■□□□□ 0.21
CSNK1E-203ENST00000396832 CHCHD10Q8WYQ3 142 aaPredicted RBP16.34■□□□□ 0.21
CSNK1E-203ENST00000396832 J3QKU1 62 aa16.33■□□□□ 0.21
CSNK1E-203ENST00000396832 F8WEM9 126 aa16.32■□□□□ 0.2
CSNK1E-203ENST00000396832 CMC4P56277 68 aaPredicted RBP16.32■□□□□ 0.2
CSNK1E-203ENST00000396832 SPATA3Q8NHX4 192 aa16.32■□□□□ 0.2
CSNK1E-203ENST00000396832 FLNBO75369 2602 aaKnown RBP16.32■□□□□ 0.2
CSNK1E-203ENST00000396832 OTOGQ6ZRI0 2925 aa16.31■□□□□ 0.2
CSNK1E-203ENST00000396832 TENM1Q9UKZ4 2725 aa16.31■□□□□ 0.2
CSNK1E-203ENST00000396832 C10orf25Q5T742 122 aa16.31■□□□□ 0.2
CSNK1E-203ENST00000396832 DEFB135Q30KP9 77 aa16.3■□□□□ 0.2
CSNK1E-203ENST00000396832 PRO0255Q9UI72 69 aa16.3■□□□□ 0.2
CSNK1E-203ENST00000396832 HTN3P15516 51 aa16.3■□□□□ 0.2
CSNK1E-203ENST00000396832 PRO0628Q9UI54 55 aa16.29■□□□□ 0.2
CSNK1E-203ENST00000396832 X6R8D5 127 aa16.29■□□□□ 0.2
CSNK1E-203ENST00000396832 TRRAPQ9Y4A5 3859 aa16.29■□□□□ 0.2
CSNK1E-203ENST00000396832 IGHV4-28A0A0C4DH34 117 aa16.28■□□□□ 0.2
CSNK1E-203ENST00000396832 REG3AQ06141 175 aa16.28■□□□□ 0.2
CSNK1E-203ENST00000396832 SMR3AQ99954 134 aa16.28■□□□□ 0.2
CSNK1E-203ENST00000396832 CXCL6P80162 114 aa16.28■□□□□ 0.2
CSNK1E-203ENST00000396832 CD164L2Q6UWJ8 174 aa16.28■□□□□ 0.2
CSNK1E-203ENST00000396832 Q6ZQY7 126 aa16.27■□□□□ 0.2
CSNK1E-203ENST00000396832 UNQ6190/PRO20217Q6UXQ8 127 aa16.27■□□□□ 0.2
CSNK1E-203ENST00000396832 FP248Q71RG6 208 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-203ENST00000396832 SMIM26A0A096LP01 95 aa16.26■□□□□ 0.19
CSNK1E-203ENST00000396832 TM2D3Q9BRN9 247 aa16.25■□□□□ 0.19
CSNK1E-203ENST00000396832 C16orf95Q9H693 158 aa16.25■□□□□ 0.19
CSNK1E-203ENST00000396832 SCXQ7RTU7 201 aa16.24■□□□□ 0.19
CSNK1E-203ENST00000396832 PDE6GP18545 87 aa16.24■□□□□ 0.19
CSNK1E-203ENST00000396832 KRTAP10-3P60369 221 aa16.23■□□□□ 0.19
CSNK1E-203ENST00000396832 KRTAP1-1Q07627 177 aa16.23■□□□□ 0.19
CSNK1E-203ENST00000396832 C9orf66Q5T8R8 295 aa16.23■□□□□ 0.19
CSNK1E-203ENST00000396832 MUC7Q8TAX7 377 aa16.22■□□□□ 0.19
CSNK1E-203ENST00000396832 HIVEP1P15822 2718 aa16.21■□□□□ 0.19
CSNK1E-203ENST00000396832 ATRQ13535 2644 aa16.2■□□□□ 0.18
CSNK1E-203ENST00000396832 TRBV7-6A0A0J9YX20 115 aa16.19■□□□□ 0.18
CSNK1E-203ENST00000396832 IGLV6-57P01721 117 aa16.19■□□□□ 0.18
CSNK1E-203ENST00000396832 LINC00612Q8N6U2 182 aa16.19■□□□□ 0.18
CSNK1E-203ENST00000396832 XAGE1AQ9HD64 81 aa16.19■□□□□ 0.18
CSNK1E-203ENST00000396832 LINC00474Q9P2X8 69 aa16.19■□□□□ 0.18
CSNK1E-203ENST00000396832 CELA1Q9UNI1 258 aa16.19■□□□□ 0.18
CSNK1E-203ENST00000396832 PKD1L1Q8TDX9 2849 aa16.19■□□□□ 0.18
CSNK1E-203ENST00000396832 SPAG11BQ08648 103 aa16.19■□□□□ 0.18
CSNK1E-203ENST00000396832 TRBV7-4A0A0J9YYF1 115 aa16.18■□□□□ 0.18
CSNK1E-203ENST00000396832 NDUFC1O43677 76 aa16.18■□□□□ 0.18
CSNK1E-203ENST00000396832 MIFP14174 115 aa16.16■□□□□ 0.18
CSNK1E-203ENST00000396832 KLK12Q9UKR0 248 aa16.16■□□□□ 0.18
CSNK1E-203ENST00000396832 C1orf43Q9BWL3 253 aa16.15■□□□□ 0.18
CSNK1E-203ENST00000396832 CYSRT1A8MQ03 144 aa16.15■□□□□ 0.18
CSNK1E-203ENST00000396832 DAD1P61803 113 aa16.15■□□□□ 0.18
CSNK1E-203ENST00000396832 H3BQ85 93 aa16.14■□□□□ 0.17
CSNK1E-203ENST00000396832 NREPQ16612 68 aa16.13■□□□□ 0.17
CSNK1E-203ENST00000396832 TEP1Q99973 2627 aaKnown RBP16.11■□□□□ 0.17
CSNK1E-203ENST00000396832 BPY2O14599 106 aa16.1■□□□□ 0.17
CSNK1E-203ENST00000396832 TMEM254Q8TBM7 123 aa16.09■□□□□ 0.17
CSNK1E-203ENST00000396832 DIRC1Q969H9 104 aa16.09■□□□□ 0.17
CSNK1E-203ENST00000396832 ATP5EP56381 51 aaPredicted RBP16.09■□□□□ 0.17
CSNK1E-203ENST00000396832 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.07■□□□□ 0.16
CSNK1E-203ENST00000396832 PKIGQ9Y2B9 76 aa16.07■□□□□ 0.16
CSNK1E-203ENST00000396832 A0A0J9YWU9 116 aa16.06■□□□□ 0.16
CSNK1E-203ENST00000396832 IGHV4-30-4P0DP06 118 aa16.06■□□□□ 0.16
CSNK1E-203ENST00000396832 HIGD2BQ4VC39 106 aa16.05■□□□□ 0.16
CSNK1E-203ENST00000396832 LYRM9A8MSI8 78 aa16.04■□□□□ 0.16
CSNK1E-203ENST00000396832 Q8N9L7 120 aa16.04■□□□□ 0.16
CSNK1E-203ENST00000396832 ZNF73O43830 326 aaPredicted RBP16.04■□□□□ 0.16
CSNK1E-203ENST00000396832 COX7BP24311 80 aa16.04■□□□□ 0.16
CSNK1E-203ENST00000396832 NSD1Q96L73 2696 aaPredicted RBP16.02■□□□□ 0.15
CSNK1E-203ENST00000396832 BRK1Q8WUW1 75 aa16.01■□□□□ 0.15
CSNK1E-203ENST00000396832 C6orf48Q9UBA6 75 aa16.01■□□□□ 0.15
CSNK1E-203ENST00000396832 FAM229BQ4G0N7 80 aa16■□□□□ 0.15
CSNK1E-203ENST00000396832 ERC2-IT1O76042 136 aa16■□□□□ 0.15
CSNK1E-203ENST00000396832 ELOF1P60002 83 aaKnown RBP15.98■□□□□ 0.15
CSNK1E-203ENST00000396832 MPLKIPQ8TAP9 179 aa15.98■□□□□ 0.15
CSNK1E-203ENST00000396832 IGKV4-1P06312 121 aa15.96■□□□□ 0.15
CSNK1E-203ENST00000396832 Q8NAQ8 132 aa15.95■□□□□ 0.14
CSNK1E-203ENST00000396832 PRYO14603 147 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms