RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 Q8NA96 180 aa7.34□□□□□ -1.23
COL4A4-201ENST00000396625 AKAP13Q12802 2813 aa7.34□□□□□ -1.24
COL4A4-201ENST00000396625 LY6G6DO95868 133 aa7.33□□□□□ -1.24
COL4A4-201ENST00000396625 IGLV1-40P01703 118 aa7.33□□□□□ -1.24
COL4A4-201ENST00000396625 MOBPQ13875 183 aa7.33□□□□□ -1.24
COL4A4-201ENST00000396625 SPACA4Q8TDM5 124 aa7.33□□□□□ -1.24
COL4A4-201ENST00000396625 A0A1B0GUV1 79 aa7.32□□□□□ -1.24
COL4A4-201ENST00000396625 CRIPTQ9P021 101 aa7.32□□□□□ -1.24
COL4A4-201ENST00000396625 SPATA3Q8NHX4 192 aa7.32□□□□□ -1.24
COL4A4-201ENST00000396625 KIAA0087Q14695 138 aa7.31□□□□□ -1.24
COL4A4-201ENST00000396625 C19orf84I3L1E1 186 aa7.31□□□□□ -1.24
COL4A4-201ENST00000396625 LINC01006Q8NI28 216 aa7.31□□□□□ -1.24
COL4A4-201ENST00000396625 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
COL4A4-201ENST00000396625 ERC2-IT1O76042 136 aa7.3□□□□□ -1.24
COL4A4-201ENST00000396625 FHL2Q14192 279 aa7.3□□□□□ -1.24
COL4A4-201ENST00000396625 C1orf134Q5TEV5 83 aa7.28□□□□□ -1.24
COL4A4-201ENST00000396625 LINC01600Q96MT4 127 aa7.28□□□□□ -1.24
COL4A4-201ENST00000396625 URB1-AS1Q96HZ7 61 aa7.28□□□□□ -1.24
COL4A4-201ENST00000396625 A0A1W2PNU3 283 aaPredicted RBP7.28□□□□□ -1.24
COL4A4-201ENST00000396625 LINC01561Q8N1V8 128 aa7.28□□□□□ -1.24
COL4A4-201ENST00000396625 C11orf71Q6IPW1 123 aa7.27□□□□□ -1.24
COL4A4-201ENST00000396625 BRI3O95415 125 aa7.27□□□□□ -1.25
COL4A4-201ENST00000396625 LINC00313P59037 77 aa7.27□□□□□ -1.25
COL4A4-201ENST00000396625 EDN2P20800 178 aa7.26□□□□□ -1.25
COL4A4-201ENST00000396625 SMCR5Q8TEV8 140 aa7.26□□□□□ -1.25
COL4A4-201ENST00000396625 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
COL4A4-201ENST00000396625 WISP2O76076 250 aa7.26□□□□□ -1.25
COL4A4-201ENST00000396625 Q6ZRU5 148 aa7.25□□□□□ -1.25
COL4A4-201ENST00000396625 C11orf72Q8NBR9 251 aa7.25□□□□□ -1.25
COL4A4-201ENST00000396625 ODF3L2Q3SX64 289 aa7.25□□□□□ -1.25
COL4A4-201ENST00000396625 Q6ZSN1 163 aa7.25□□□□□ -1.25
COL4A4-201ENST00000396625 APLNQ9ULZ1 77 aa7.25□□□□□ -1.25
COL4A4-201ENST00000396625 KTN1-AS1Q86SY8 53 aa7.25□□□□□ -1.25
COL4A4-201ENST00000396625 C22orf24Q9Y442 160 aa7.25□□□□□ -1.25
COL4A4-201ENST00000396625 LINC01546A6NGU7 62 aa7.24□□□□□ -1.25
COL4A4-201ENST00000396625 LOC110117498A0A087WWA1 95 aa7.24□□□□□ -1.25
COL4A4-201ENST00000396625 LYPD5Q6UWN5 251 aa7.24□□□□□ -1.25
COL4A4-201ENST00000396625 CENPEQ02224 2701 aa7.24□□□□□ -1.25
COL4A4-201ENST00000396625 HECTD1Q9ULT8 2610 aa7.24□□□□□ -1.25
COL4A4-201ENST00000396625 NHLRC4P0CG21 123 aaPredicted RBP7.24□□□□□ -1.25
COL4A4-201ENST00000396625 Q6ZQT0 140 aa7.23□□□□□ -1.25
COL4A4-201ENST00000396625 UQCR11O14957 56 aa7.23□□□□□ -1.25
COL4A4-201ENST00000396625 COA5Q86WW8 74 aa7.22□□□□□ -1.25
COL4A4-201ENST00000396625 A0A096LNJ9 63 aa7.22□□□□□ -1.25
COL4A4-201ENST00000396625 COX8CQ7Z4L0 72 aa7.21□□□□□ -1.26
COL4A4-201ENST00000396625 IGLV1-51P01701 117 aa7.21□□□□□ -1.26
COL4A4-201ENST00000396625 MIR22HGQ0VDD5 57 aa7.2□□□□□ -1.26
COL4A4-201ENST00000396625 NBEAL1Q6ZS30 2694 aa7.2□□□□□ -1.26
COL4A4-201ENST00000396625 FAM19A4Q96LR4 140 aa7.2□□□□□ -1.26
COL4A4-201ENST00000396625 IGLV5-39A0A0G2JS06 123 aa7.2□□□□□ -1.26
COL4A4-201ENST00000396625 LOC101927531A0A1B0GV80 90 aa7.2□□□□□ -1.26
COL4A4-201ENST00000396625 FAM218AQ96MZ4 157 aa7.19□□□□□ -1.26
COL4A4-201ENST00000396625 ELOF1P60002 83 aaKnown RBP7.19□□□□□ -1.26
COL4A4-201ENST00000396625 Q6ZRX8 168 aa7.19□□□□□ -1.26
COL4A4-201ENST00000396625 Q8NBF4 154 aa7.19□□□□□ -1.26
COL4A4-201ENST00000396625 LINC00476Q8WZB0 136 aa7.19□□□□□ -1.26
COL4A4-201ENST00000396625 RPL37AP61513 92 aaKnown RBP7.18□□□□□ -1.26
COL4A4-201ENST00000396625 Q96NJ1 140 aa7.18□□□□□ -1.26
COL4A4-201ENST00000396625 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
COL4A4-201ENST00000396625 ATRQ13535 2644 aa7.18□□□□□ -1.26
COL4A4-201ENST00000396625 CHTF8P0CG12 524 aa7.17□□□□□ -1.26
COL4A4-201ENST00000396625 A8MUN3 132 aa7.17□□□□□ -1.26
COL4A4-201ENST00000396625 LINC00167Q96N53 147 aa7.16□□□□□ -1.26
COL4A4-201ENST00000396625 LUZP6Q538Z0 58 aa7.16□□□□□ -1.26
COL4A4-201ENST00000396625 EPM2AB3EWF7 344 aa7.16□□□□□ -1.26
COL4A4-201ENST00000396625 PRO0461Q9UI25 63 aa7.16□□□□□ -1.26
COL4A4-201ENST00000396625 SMCPP49901 116 aaPredicted RBP7.15□□□□□ -1.26
COL4A4-201ENST00000396625 MAST4O15021 2626 aa7.14□□□□□ -1.27
COL4A4-201ENST00000396625 CENPFP49454 3210 aa7.14□□□□□ -1.27
COL4A4-201ENST00000396625 A8MWP4 228 aa7.14□□□□□ -1.27
COL4A4-201ENST00000396625 WIPF1O43516 503 aa7.14□□□□□ -1.27
COL4A4-201ENST00000396625 TYMSOSQ8TAI1 123 aa7.14□□□□□ -1.27
COL4A4-201ENST00000396625 C9orf129Q5T035 196 aaKnown RBP7.14□□□□□ -1.27
COL4A4-201ENST00000396625 LINC01554Q52M75 96 aa7.14□□□□□ -1.27
COL4A4-201ENST00000396625 FAM229AH3BQW9 127 aa7.13□□□□□ -1.27
COL4A4-201ENST00000396625 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
COL4A4-201ENST00000396625 LCA10Q71F78 164 aa7.12□□□□□ -1.27
COL4A4-201ENST00000396625 MGAM2Q2M2H8 2515 aa7.12□□□□□ -1.27
COL4A4-201ENST00000396625 CDC42SE1Q9NRR8 79 aa7.11□□□□□ -1.27
COL4A4-201ENST00000396625 IGHV3OR16-9A0A0B4J2B5 98 aa7.11□□□□□ -1.27
COL4A4-201ENST00000396625 SMR3AQ99954 134 aa7.11□□□□□ -1.27
COL4A4-201ENST00000396625 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
COL4A4-201ENST00000396625 CFAP46Q8IYW2 2715 aa7.1□□□□□ -1.27
COL4A4-201ENST00000396625 KIF25-AS1Q9Y6Z4 181 aa7.1□□□□□ -1.27
COL4A4-201ENST00000396625 K7EQZ3 153 aa7.1□□□□□ -1.27
COL4A4-201ENST00000396625 FHL3Q13643 280 aa7.09□□□□□ -1.27
COL4A4-201ENST00000396625 IGLV6-57P01721 117 aa7.09□□□□□ -1.27
COL4A4-201ENST00000396625 NOTCH1P46531 2555 aa7.08□□□□□ -1.28
COL4A4-201ENST00000396625 COX6B2Q6YFQ2 88 aa7.08□□□□□ -1.28
COL4A4-201ENST00000396625 Q6ZRP5 223 aa7.08□□□□□ -1.28
COL4A4-201ENST00000396625 ST20-AS1Q8NBB2 130 aa7.08□□□□□ -1.28
COL4A4-201ENST00000396625 AVPP01185 164 aa7.08□□□□□ -1.28
COL4A4-201ENST00000396625 PHF5AQ7RTV0 110 aaKnown RBP7.08□□□□□ -1.28
COL4A4-201ENST00000396625 C16orf90A8MZG2 172 aa7.08□□□□□ -1.28
COL4A4-201ENST00000396625 IGLV5-45A0A087WSX0 123 aa7.07□□□□□ -1.28
COL4A4-201ENST00000396625 C16orf95Q9H693 158 aa7.06□□□□□ -1.28
COL4A4-201ENST00000396625 LINC00336Q6ZUF6 198 aa7.05□□□□□ -1.28
COL4A4-201ENST00000396625 A0A0D9SG42 100 aa7.05□□□□□ -1.28
COL4A4-201ENST00000396625 STAB1Q9NY15 2570 aa7.05□□□□□ -1.28
COL4A4-201ENST00000396625 SRCAPQ6ZRS2 3230 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms