RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 NSD1Q96L73 2696 aaPredicted RBP6.8□□□□□ -1.32
TRIM39-203ENST00000396547 NANOS2P60321 138 aaKnown RBP6.8□□□□□ -1.32
TRIM39-203ENST00000396547 C16orf74Q96GX8 76 aa6.8□□□□□ -1.32
TRIM39-203ENST00000396547 PLAC8L1A1L4L8 177 aa6.79□□□□□ -1.32
TRIM39-203ENST00000396547 DEFB4AO15263 64 aa6.79□□□□□ -1.32
TRIM39-203ENST00000396547 SPATA3Q8NHX4 192 aa6.79□□□□□ -1.32
TRIM39-203ENST00000396547 PRO0628Q9UI54 55 aa6.79□□□□□ -1.32
TRIM39-203ENST00000396547 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
TRIM39-203ENST00000396547 RBM3P98179 157 aaKnown RBP6.79□□□□□ -1.32
TRIM39-203ENST00000396547 FAM236DA0A1B0GTK5 79 aa6.78□□□□□ -1.32
TRIM39-203ENST00000396547 FAM236CP0DP71 79 aa6.78□□□□□ -1.32
TRIM39-203ENST00000396547 ANGP03950 147 aaKnown RBP6.78□□□□□ -1.32
TRIM39-203ENST00000396547 RMI2Q96E14 147 aa6.78□□□□□ -1.32
TRIM39-203ENST00000396547 V9GYY9 64 aa6.78□□□□□ -1.32
TRIM39-203ENST00000396547 HIVEP2P31629 2446 aa6.78□□□□□ -1.32
TRIM39-203ENST00000396547 LINC00336Q6ZUF6 198 aa6.77□□□□□ -1.32
TRIM39-203ENST00000396547 ANK2Q01484 3957 aa6.77□□□□□ -1.33
TRIM39-203ENST00000396547 C6orf223Q8N319 242 aa6.77□□□□□ -1.33
TRIM39-203ENST00000396547 Q8NDZ9 215 aa6.77□□□□□ -1.33
TRIM39-203ENST00000396547 NDUFC2O95298 119 aa6.75□□□□□ -1.33
TRIM39-203ENST00000396547 Q6ZQY7 126 aa6.75□□□□□ -1.33
TRIM39-203ENST00000396547 Q8IZM0 81 aa6.75□□□□□ -1.33
TRIM39-203ENST00000396547 HTN3P15516 51 aa6.75□□□□□ -1.33
TRIM39-203ENST00000396547 LINC01547P58512 204 aaPredicted RBP6.75□□□□□ -1.33
TRIM39-203ENST00000396547 UNQ6190/PRO20217Q6UXQ8 127 aa6.75□□□□□ -1.33
TRIM39-203ENST00000396547 CHCHD10Q8WYQ3 142 aaPredicted RBP6.75□□□□□ -1.33
TRIM39-203ENST00000396547 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
TRIM39-203ENST00000396547 LINC01006Q8NI28 216 aa6.74□□□□□ -1.33
TRIM39-203ENST00000396547 F8WEM9 126 aa6.74□□□□□ -1.33
TRIM39-203ENST00000396547 XAGE1AQ9HD64 81 aa6.74□□□□□ -1.33
TRIM39-203ENST00000396547 ATP5EP2Q5VTU8 51 aa6.73□□□□□ -1.33
TRIM39-203ENST00000396547 LINC00575Q6W349 94 aa6.73□□□□□ -1.33
TRIM39-203ENST00000396547 Q6ZVQ6 151 aa6.73□□□□□ -1.33
TRIM39-203ENST00000396547 Q6ZQT0 140 aa6.73□□□□□ -1.33
TRIM39-203ENST00000396547 H7BZZ5 65 aa6.72□□□□□ -1.33
TRIM39-203ENST00000396547 Q8N9L7 120 aa6.72□□□□□ -1.33
TRIM39-203ENST00000396547 C16orf95Q9H693 158 aa6.72□□□□□ -1.33
TRIM39-203ENST00000396547 DNAJC9-AS1A6NH13 148 aa6.71□□□□□ -1.33
TRIM39-203ENST00000396547 TRAV7A0A075B6U4 112 aa6.71□□□□□ -1.34
TRIM39-203ENST00000396547 REG3AQ06141 175 aa6.71□□□□□ -1.34
TRIM39-203ENST00000396547 KIAA0087Q14695 138 aa6.71□□□□□ -1.34
TRIM39-203ENST00000396547 LINC00167Q96N53 147 aa6.71□□□□□ -1.34
TRIM39-203ENST00000396547 TM2D3Q9BRN9 247 aa6.71□□□□□ -1.34
TRIM39-203ENST00000396547 ZNF561-AS1K7EIQ3 104 aa6.7□□□□□ -1.34
TRIM39-203ENST00000396547 CSNK1G2-AS1Q8NCQ2 148 aa6.7□□□□□ -1.34
TRIM39-203ENST00000396547 LINC00474Q9P2X8 69 aa6.7□□□□□ -1.34
TRIM39-203ENST00000396547 DAD1P61803 113 aa6.7□□□□□ -1.34
TRIM39-203ENST00000396547 SPAG11BQ08648 103 aa6.7□□□□□ -1.34
TRIM39-203ENST00000396547 CD164L2Q6UWJ8 174 aa6.7□□□□□ -1.34
TRIM39-203ENST00000396547 KRTAP24-1Q3LI83 254 aa6.69□□□□□ -1.34
TRIM39-203ENST00000396547 A0A0U1RQV1 116 aa6.69□□□□□ -1.34
TRIM39-203ENST00000396547 LYPD5Q6UWN5 251 aa6.69□□□□□ -1.34
TRIM39-203ENST00000396547 TRBV10-3A0A0K0K1G6 114 aa6.68□□□□□ -1.34
TRIM39-203ENST00000396547 C1orf195Q5TG92 126 aa6.68□□□□□ -1.34
TRIM39-203ENST00000396547 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.68□□□□□ -1.34
TRIM39-203ENST00000396547 LINC00482Q8N8I6 264 aa6.68□□□□□ -1.34
TRIM39-203ENST00000396547 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
TRIM39-203ENST00000396547 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
TRIM39-203ENST00000396547 NDUFC2-KCTD14E9PQ53 114 aa6.68□□□□□ -1.34
TRIM39-203ENST00000396547 KLK12Q9UKR0 248 aa6.68□□□□□ -1.34
TRIM39-203ENST00000396547 SERP1Q9Y6X1 66 aa6.68□□□□□ -1.34
TRIM39-203ENST00000396547 C19orf73Q9NVV2 129 aa6.67□□□□□ -1.34
TRIM39-203ENST00000396547 A0A1B0GUV1 79 aa6.67□□□□□ -1.34
TRIM39-203ENST00000396547 MUC7Q8TAX7 377 aa6.67□□□□□ -1.34
TRIM39-203ENST00000396547 IGLV1-51P01701 117 aa6.66□□□□□ -1.34
TRIM39-203ENST00000396547 TENM1Q9UKZ4 2725 aa6.66□□□□□ -1.34
TRIM39-203ENST00000396547 COX17Q14061 63 aa6.65□□□□□ -1.34
TRIM39-203ENST00000396547 DEFB135Q30KP9 77 aa6.65□□□□□ -1.34
TRIM39-203ENST00000396547 DEFB105AQ8NG35 78 aa6.65□□□□□ -1.34
TRIM39-203ENST00000396547 MDFIQ99750 246 aa6.65□□□□□ -1.34
TRIM39-203ENST00000396547 CMC4P56277 68 aaPredicted RBP6.65□□□□□ -1.34
TRIM39-203ENST00000396547 HIGD2BQ4VC39 106 aa6.65□□□□□ -1.34
TRIM39-203ENST00000396547 BRK1Q8WUW1 75 aa6.65□□□□□ -1.34
TRIM39-203ENST00000396547 DIRC1Q969H9 104 aa6.65□□□□□ -1.35
TRIM39-203ENST00000396547 TRBV7-6A0A0J9YX20 115 aa6.64□□□□□ -1.35
TRIM39-203ENST00000396547 C3orf84H3BNL1 204 aa6.64□□□□□ -1.35
TRIM39-203ENST00000396547 IGHV4-28A0A0C4DH34 117 aa6.63□□□□□ -1.35
TRIM39-203ENST00000396547 MIFP14174 115 aa6.63□□□□□ -1.35
TRIM39-203ENST00000396547 NREPQ16612 68 aa6.63□□□□□ -1.35
TRIM39-203ENST00000396547 FP248Q71RG6 208 aaPredicted RBP6.63□□□□□ -1.35
TRIM39-203ENST00000396547 LOC110117498A0A087WWA1 95 aa6.63□□□□□ -1.35
TRIM39-203ENST00000396547 BPY2O14599 106 aa6.63□□□□□ -1.35
TRIM39-203ENST00000396547 COX7BP24311 80 aa6.63□□□□□ -1.35
TRIM39-203ENST00000396547 LRCOL1A6NCL2 159 aa6.62□□□□□ -1.35
TRIM39-203ENST00000396547 KLKP1Q107X0 134 aa6.62□□□□□ -1.35
TRIM39-203ENST00000396547 ATRQ13535 2644 aa6.62□□□□□ -1.35
TRIM39-203ENST00000396547 VWFP04275 2813 aa6.62□□□□□ -1.35
TRIM39-203ENST00000396547 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
TRIM39-203ENST00000396547 ZNF73O43830 326 aaPredicted RBP6.62□□□□□ -1.35
TRIM39-203ENST00000396547 CMYA5Q8N3K9 4069 aa6.61□□□□□ -1.35
TRIM39-203ENST00000396547 X6R8D5 127 aa6.61□□□□□ -1.35
TRIM39-203ENST00000396547 FBN1P35555 2871 aaKnown RBP6.61□□□□□ -1.35
TRIM39-203ENST00000396547 IGLV6-57P01721 117 aa6.61□□□□□ -1.35
TRIM39-203ENST00000396547 PRB2P02812 416 aaPredicted RBP6.61□□□□□ -1.35
TRIM39-203ENST00000396547 TMEM254Q8TBM7 123 aa6.61□□□□□ -1.35
TRIM39-203ENST00000396547 CELA1Q9UNI1 258 aa6.6□□□□□ -1.35
TRIM39-203ENST00000396547 DNHD1Q96M86 4753 aa6.6□□□□□ -1.35
TRIM39-203ENST00000396547 CXCL6P80162 114 aa6.6□□□□□ -1.35
TRIM39-203ENST00000396547 C6orf48Q9UBA6 75 aa6.59□□□□□ -1.35
TRIM39-203ENST00000396547 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms