RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 LAMTOR3Q9UHA4 124 aa6.4□□□□□ -1.39
NDE1-201ENST00000396354 CELA1Q9UNI1 258 aa6.4□□□□□ -1.39
NDE1-201ENST00000396354 LORP23490 312 aaPredicted RBP6.39□□□□□ -1.39
NDE1-201ENST00000396354 HIGD2BQ4VC39 106 aa6.39□□□□□ -1.39
NDE1-201ENST00000396354 CSMD3Q7Z407 3707 aa6.39□□□□□ -1.39
NDE1-201ENST00000396354 REG3AQ06141 175 aa6.39□□□□□ -1.39
NDE1-201ENST00000396354 PRO0255Q9UI72 69 aa6.38□□□□□ -1.39
NDE1-201ENST00000396354 IBA57-AS1B1ANH7 110 aa6.38□□□□□ -1.39
NDE1-201ENST00000396354 WIPF1O43516 503 aa6.38□□□□□ -1.39
NDE1-201ENST00000396354 SCXQ7RTU7 201 aa6.38□□□□□ -1.39
NDE1-201ENST00000396354 Q8NDZ9 215 aa6.38□□□□□ -1.39
NDE1-201ENST00000396354 OVOL2Q9BRP0 275 aa6.38□□□□□ -1.39
NDE1-201ENST00000396354 ORMDL1Q9P0S3 153 aa6.38□□□□□ -1.39
NDE1-201ENST00000396354 FAM240AA0A1B0GVK7 77 aa6.37□□□□□ -1.39
NDE1-201ENST00000396354 CYSTM1Q9H1C7 97 aa6.37□□□□□ -1.39
NDE1-201ENST00000396354 IGHV4-28A0A0C4DH34 117 aa6.37□□□□□ -1.39
NDE1-201ENST00000396354 TMEM126AQ9H061 195 aa6.37□□□□□ -1.39
NDE1-201ENST00000396354 RETNQ9HD89 108 aa6.37□□□□□ -1.39
NDE1-201ENST00000396354 HAMPP81172 84 aa6.36□□□□□ -1.39
NDE1-201ENST00000396354 ENHOQ6UWT2 76 aa6.36□□□□□ -1.39
NDE1-201ENST00000396354 FAM19A1Q7Z5A9 133 aa6.36□□□□□ -1.39
NDE1-201ENST00000396354 LYSTQ99698 3801 aa6.36□□□□□ -1.39
NDE1-201ENST00000396354 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
NDE1-201ENST00000396354 FAM19A5Q7Z5A7 132 aaPredicted RBP6.36□□□□□ -1.39
NDE1-201ENST00000396354 ACYP1P07311 99 aa6.35□□□□□ -1.39
NDE1-201ENST00000396354 SPAG11BQ08648 103 aa6.35□□□□□ -1.39
NDE1-201ENST00000396354 TENM2Q9NT68 2774 aa6.35□□□□□ -1.39
NDE1-201ENST00000396354 H0YGX0 51 aa6.35□□□□□ -1.39
NDE1-201ENST00000396354 DEFB121Q5J5C9 76 aa6.35□□□□□ -1.39
NDE1-201ENST00000396354 LINC01600Q96MT4 127 aa6.34□□□□□ -1.39
NDE1-201ENST00000396354 M0R2N4 97 aa6.34□□□□□ -1.39
NDE1-201ENST00000396354 C3orf22Q8N5N4 141 aa6.33□□□□□ -1.4
NDE1-201ENST00000396354 LINC00612Q8N6U2 182 aa6.33□□□□□ -1.4
NDE1-201ENST00000396354 CMC4P56277 68 aaPredicted RBP6.33□□□□□ -1.4
NDE1-201ENST00000396354 Q6ZQY7 126 aa6.33□□□□□ -1.4
NDE1-201ENST00000396354 FAM19A3Q7Z5A8 133 aa6.32□□□□□ -1.4
NDE1-201ENST00000396354 Q8N814 137 aa6.32□□□□□ -1.4
NDE1-201ENST00000396354 KIR2DL5BQ8NHK3 375 aa6.32□□□□□ -1.4
NDE1-201ENST00000396354 DSCR8Q96T75 97 aa6.32□□□□□ -1.4
NDE1-201ENST00000396354 NANOS2P60321 138 aaKnown RBP6.32□□□□□ -1.4
NDE1-201ENST00000396354 USP17L23D6RBM5 183 aa6.31□□□□□ -1.4
NDE1-201ENST00000396354 DEFB105AQ8NG35 78 aa6.31□□□□□ -1.4
NDE1-201ENST00000396354 PRB2P02812 416 aaPredicted RBP6.31□□□□□ -1.4
NDE1-201ENST00000396354 CD164L2Q6UWJ8 174 aa6.31□□□□□ -1.4
NDE1-201ENST00000396354 Q8IZM0 81 aa6.31□□□□□ -1.4
NDE1-201ENST00000396354 HUWE1Q7Z6Z7 4374 aaKnown RBP6.3□□□□□ -1.4
NDE1-201ENST00000396354 LINC01561Q8N1V8 128 aa6.3□□□□□ -1.4
NDE1-201ENST00000396354 TRBV10-3A0A0K0K1G6 114 aa6.29□□□□□ -1.4
NDE1-201ENST00000396354 J3KT08 172 aa6.29□□□□□ -1.4
NDE1-201ENST00000396354 UQCRQO14949 82 aa6.29□□□□□ -1.4
NDE1-201ENST00000396354 KIAA0087Q14695 138 aa6.29□□□□□ -1.4
NDE1-201ENST00000396354 C9orf66Q5T8R8 295 aa6.29□□□□□ -1.4
NDE1-201ENST00000396354 WFDC10BQ8IUB3 73 aa6.29□□□□□ -1.4
NDE1-201ENST00000396354 DNAH1Q9P2D7 4330 aa6.29□□□□□ -1.4
NDE1-201ENST00000396354 C20orf197Q8N268 126 aa6.29□□□□□ -1.4
NDE1-201ENST00000396354 STAB2Q8WWQ8 2551 aa6.28□□□□□ -1.4
NDE1-201ENST00000396354 COX7CP15954 63 aa6.28□□□□□ -1.4
NDE1-201ENST00000396354 SRRM2Q9UQ35 2752 aaKnown RBP6.28□□□□□ -1.4
NDE1-201ENST00000396354 Q8N9L7 120 aa6.28□□□□□ -1.4
NDE1-201ENST00000396354 Q8NAQ8 132 aa6.28□□□□□ -1.4
NDE1-201ENST00000396354 IGHV4-30-4P0DP06 118 aa6.27□□□□□ -1.41
NDE1-201ENST00000396354 UBL5Q9BZL1 73 aa6.27□□□□□ -1.41
NDE1-201ENST00000396354 ATOX1O00244 68 aa6.27□□□□□ -1.41
NDE1-201ENST00000396354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.27□□□□□ -1.41
NDE1-201ENST00000396354 CAMK2N2Q96S95 79 aa6.27□□□□□ -1.41
NDE1-201ENST00000396354 RBM3P98179 157 aaKnown RBP6.27□□□□□ -1.41
NDE1-201ENST00000396354 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
NDE1-201ENST00000396354 IMUPQ9GZP8 106 aa6.27□□□□□ -1.41
NDE1-201ENST00000396354 SNURFQ9Y675 71 aa6.27□□□□□ -1.41
NDE1-201ENST00000396354 COL7A1Q02388 2944 aa6.26□□□□□ -1.41
NDE1-201ENST00000396354 IGKV2D-24A0A075B6R9 120 aa6.26□□□□□ -1.41
NDE1-201ENST00000396354 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
NDE1-201ENST00000396354 TMEM256-PLSCR3K7ERE1 68 aa6.26□□□□□ -1.41
NDE1-201ENST00000396354 CCKP06307 115 aa6.26□□□□□ -1.41
NDE1-201ENST00000396354 KRTAP10-11P60412 298 aa6.26□□□□□ -1.41
NDE1-201ENST00000396354 SPART-AS1P0CW21 52 aa6.26□□□□□ -1.41
NDE1-201ENST00000396354 DNAH10Q8IVF4 4471 aa6.25□□□□□ -1.41
NDE1-201ENST00000396354 C2orf48Q96LS8 159 aa6.25□□□□□ -1.41
NDE1-201ENST00000396354 APOC4P55056 127 aa6.25□□□□□ -1.41
NDE1-201ENST00000396354 Q6ZTC4 211 aa6.25□□□□□ -1.41
NDE1-201ENST00000396354 C4orf26Q17RF5 130 aa6.24□□□□□ -1.41
NDE1-201ENST00000396354 C6orf48Q9UBA6 75 aa6.24□□□□□ -1.41
NDE1-201ENST00000396354 C3orf84H3BNL1 204 aa6.24□□□□□ -1.41
NDE1-201ENST00000396354 MRAPQ8TCY5 172 aa6.24□□□□□ -1.41
NDE1-201ENST00000396354 LYRM9A8MSI8 78 aa6.23□□□□□ -1.41
NDE1-201ENST00000396354 Q6JHZ5 121 aa6.23□□□□□ -1.41
NDE1-201ENST00000396354 HRCT1Q6UXD1 115 aa6.23□□□□□ -1.41
NDE1-201ENST00000396354 LINC00575Q6W349 94 aa6.23□□□□□ -1.41
NDE1-201ENST00000396354 RPL37AP8A6NKH3 93 aa6.23□□□□□ -1.41
NDE1-201ENST00000396354 JMJD7-PLA2G4BH0Y9G9 81 aa6.23□□□□□ -1.41
NDE1-201ENST00000396354 SERP2Q8N6R1 65 aa6.22□□□□□ -1.41
NDE1-201ENST00000396354 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
NDE1-201ENST00000396354 KPRPQ5T749 579 aaPredicted RBP6.22□□□□□ -1.41
NDE1-201ENST00000396354 Q6ZRU5 148 aa6.21□□□□□ -1.41
NDE1-201ENST00000396354 DIRC1Q969H9 104 aa6.21□□□□□ -1.42
NDE1-201ENST00000396354 TRAV10A0A0B4J240 114 aa6.21□□□□□ -1.42
NDE1-201ENST00000396354 LYPD5Q6UWN5 251 aa6.21□□□□□ -1.42
NDE1-201ENST00000396354 ZNF73O43830 326 aaPredicted RBP6.2□□□□□ -1.42
NDE1-201ENST00000396354 DNAH9Q9NYC9 4486 aa6.2□□□□□ -1.42
NDE1-201ENST00000396354 LELP1Q5T871 98 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms