RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 XAGE1AQ9HD64 81 aa9.98□□□□□ -0.81
VAMP1-202ENST00000396308 NDUFC2O95298 119 aa9.97□□□□□ -0.81
VAMP1-202ENST00000396308 COL5A1-AS1Q5SY13 56 aa9.97□□□□□ -0.81
VAMP1-202ENST00000396308 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
VAMP1-202ENST00000396308 A0A0B4J2C4 111 aa9.96□□□□□ -0.82
VAMP1-202ENST00000396308 C16orf90A8MZG2 172 aa9.96□□□□□ -0.82
VAMP1-202ENST00000396308 TRAV13-2A0A0B4J235 113 aa9.95□□□□□ -0.82
VAMP1-202ENST00000396308 LBHQ53QV2 105 aaPredicted RBP9.95□□□□□ -0.82
VAMP1-202ENST00000396308 NKAPP1Q8N9T2 125 aa9.94□□□□□ -0.82
VAMP1-202ENST00000396308 IGKV2-24A0A0C4DH68 120 aa9.93□□□□□ -0.82
VAMP1-202ENST00000396308 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
VAMP1-202ENST00000396308 CFC1BP0CG36 223 aa9.93□□□□□ -0.82
VAMP1-202ENST00000396308 CFC1P0CG37 223 aa9.93□□□□□ -0.82
VAMP1-202ENST00000396308 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
VAMP1-202ENST00000396308 PRO1854Q9UHT4 67 aa9.93□□□□□ -0.82
VAMP1-202ENST00000396308 SACSQ9NZJ4 4579 aa9.92□□□□□ -0.82
VAMP1-202ENST00000396308 A0A096LNI7 61 aa9.92□□□□□ -0.82
VAMP1-202ENST00000396308 A0A1B0GWB2 263 aa9.92□□□□□ -0.82
VAMP1-202ENST00000396308 K7ERJ3 54 aa9.92□□□□□ -0.82
VAMP1-202ENST00000396308 Q1RN00 199 aa9.92□□□□□ -0.82
VAMP1-202ENST00000396308 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
VAMP1-202ENST00000396308 NCR3O14931 201 aa9.91□□□□□ -0.82
VAMP1-202ENST00000396308 S100A7L2Q5SY68 101 aa9.91□□□□□ -0.82
VAMP1-202ENST00000396308 C9orf129Q5T035 196 aaKnown RBP9.91□□□□□ -0.82
VAMP1-202ENST00000396308 OR13C6PQ8NH95 151 aa9.91□□□□□ -0.82
VAMP1-202ENST00000396308 PLA2G2DQ9UNK4 145 aa9.91□□□□□ -0.82
VAMP1-202ENST00000396308 DNAH6Q9C0G6 4158 aa9.9□□□□□ -0.82
VAMP1-202ENST00000396308 RPL13AP40429 203 aaKnown RBP9.9□□□□□ -0.82
VAMP1-202ENST00000396308 CBY1Q9Y3M2 126 aa9.9□□□□□ -0.82
VAMP1-202ENST00000396308 SDIM1Q6ZPB5 146 aa9.89□□□□□ -0.83
VAMP1-202ENST00000396308 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
VAMP1-202ENST00000396308 M0R378 163 aa9.88□□□□□ -0.83
VAMP1-202ENST00000396308 VPREB1P12018 145 aa9.88□□□□□ -0.83
VAMP1-202ENST00000396308 LINC01620Q4KN68 170 aa9.88□□□□□ -0.83
VAMP1-202ENST00000396308 FAM19A5Q7Z5A7 132 aaPredicted RBP9.88□□□□□ -0.83
VAMP1-202ENST00000396308 IGKV2-28A0A075B6P5 120 aa9.87□□□□□ -0.83
VAMP1-202ENST00000396308 H7C2G1 150 aa9.87□□□□□ -0.83
VAMP1-202ENST00000396308 IGKV2D-28P01615 120 aa9.87□□□□□ -0.83
VAMP1-202ENST00000396308 TMEM126AQ9H061 195 aa9.87□□□□□ -0.83
VAMP1-202ENST00000396308 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
VAMP1-202ENST00000396308 PSMB2P49721 201 aa9.85□□□□□ -0.83
VAMP1-202ENST00000396308 LYRM7Q5U5X0 104 aa9.85□□□□□ -0.83
VAMP1-202ENST00000396308 LINC00337Q8N6G1 96 aa9.85□□□□□ -0.83
VAMP1-202ENST00000396308 CHTF8P0CG12 524 aa9.84□□□□□ -0.83
VAMP1-202ENST00000396308 FUSP35637 526 aaKnown RBP eCLIP9.84□□□□□ -0.83
VAMP1-202ENST00000396308 KRTAP10-2P60368 255 aa9.84□□□□□ -0.83
VAMP1-202ENST00000396308 PRR3P79522 188 aaKnown RBP9.84□□□□□ -0.83
VAMP1-202ENST00000396308 SERTAD4-AS1Q5TG53 156 aa9.84□□□□□ -0.83
VAMP1-202ENST00000396308 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
VAMP1-202ENST00000396308 FAM168BA1KXE4 195 aa9.83□□□□□ -0.84
VAMP1-202ENST00000396308 M0QXV9 152 aa9.83□□□□□ -0.84
VAMP1-202ENST00000396308 TAX1BP3O14907 124 aa9.83□□□□□ -0.84
VAMP1-202ENST00000396308 TSPAN13O95857 204 aa9.83□□□□□ -0.84
VAMP1-202ENST00000396308 COX6CP09669 75 aa9.83□□□□□ -0.84
VAMP1-202ENST00000396308 C9orf118A6NHY6 69 aa9.82□□□□□ -0.84
VAMP1-202ENST00000396308 MRPL55Q7Z7F7 128 aaKnown RBP9.82□□□□□ -0.84
VAMP1-202ENST00000396308 Q8NDZ9 215 aa9.82□□□□□ -0.84
VAMP1-202ENST00000396308 H3BUT2 72 aa9.81□□□□□ -0.84
VAMP1-202ENST00000396308 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
VAMP1-202ENST00000396308 KMT2AQ03164 3969 aa9.8□□□□□ -0.84
VAMP1-202ENST00000396308 C7orf33Q8WU49 177 aa9.8□□□□□ -0.84
VAMP1-202ENST00000396308 TRAV23DV6A0A075B6W5 121 aa9.79□□□□□ -0.84
VAMP1-202ENST00000396308 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
VAMP1-202ENST00000396308 GAGE10A6NGK3 116 aa9.79□□□□□ -0.84
VAMP1-202ENST00000396308 IGLV6-57P01721 117 aa9.79□□□□□ -0.84
VAMP1-202ENST00000396308 SCGB1C2P0DMR2 95 aa9.79□□□□□ -0.84
VAMP1-202ENST00000396308 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.79□□□□□ -0.84
VAMP1-202ENST00000396308 DNAH10Q8IVF4 4471 aa9.78□□□□□ -0.84
VAMP1-202ENST00000396308 FABP2P12104 132 aa9.78□□□□□ -0.84
VAMP1-202ENST00000396308 UBE2BP63146 152 aa9.78□□□□□ -0.84
VAMP1-202ENST00000396308 VAMP3Q15836 100 aa9.78□□□□□ -0.84
VAMP1-202ENST00000396308 SMIM11BQ8TCY0 68 aa9.78□□□□□ -0.84
VAMP1-202ENST00000396308 A0A1W2PNN7 141 aa9.77□□□□□ -0.85
VAMP1-202ENST00000396308 PRYO14603 147 aa9.77□□□□□ -0.85
VAMP1-202ENST00000396308 RPL28P46779 137 aaKnown RBP9.77□□□□□ -0.85
VAMP1-202ENST00000396308 DIRC1Q969H9 104 aa9.77□□□□□ -0.85
VAMP1-202ENST00000396308 NAA38Q9BRA0 125 aaKnown RBP9.77□□□□□ -0.85
VAMP1-202ENST00000396308 HYDINQ4G0P3 5121 aa9.77□□□□□ -0.85
VAMP1-202ENST00000396308 A0A087WYN8 130 aa9.76□□□□□ -0.85
VAMP1-202ENST00000396308 A0A1W2PPM0 123 aa9.76□□□□□ -0.85
VAMP1-202ENST00000396308 LINC00167Q96N53 147 aa9.76□□□□□ -0.85
VAMP1-202ENST00000396308 TRIAP1O43715 76 aa9.75□□□□□ -0.85
VAMP1-202ENST00000396308 A0A1B0GVY2 172 aa9.74□□□□□ -0.85
VAMP1-202ENST00000396308 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
VAMP1-202ENST00000396308 PANO1I0J062 215 aa9.74□□□□□ -0.85
VAMP1-202ENST00000396308 SNCGO76070 127 aa9.74□□□□□ -0.85
VAMP1-202ENST00000396308 PLAC8Q9NZF1 115 aa9.74□□□□□ -0.85
VAMP1-202ENST00000396308 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
VAMP1-202ENST00000396308 ZNF73O43830 326 aaPredicted RBP9.73□□□□□ -0.85
VAMP1-202ENST00000396308 KRTAP10-1P60331 282 aa9.73□□□□□ -0.85
VAMP1-202ENST00000396308 KRTAP7-1Q8IUC3 87 aa9.73□□□□□ -0.85
VAMP1-202ENST00000396308 KCNQ1DNQ9H478 68 aa9.73□□□□□ -0.85
VAMP1-202ENST00000396308 H0YGX0 51 aa9.72□□□□□ -0.85
VAMP1-202ENST00000396308 C6orf99Q4VX62 202 aa9.72□□□□□ -0.85
VAMP1-202ENST00000396308 PHF5AQ7RTV0 110 aaKnown RBP9.72□□□□□ -0.85
VAMP1-202ENST00000396308 TRBV20-1A0A075B6N2 111 aa9.71□□□□□ -0.86
VAMP1-202ENST00000396308 ETDCA0A1B0GVM5 59 aa9.71□□□□□ -0.86
VAMP1-202ENST00000396308 REG3GQ6UW15 175 aa9.71□□□□□ -0.86
VAMP1-202ENST00000396308 Q6ZSA8 131 aa9.71□□□□□ -0.86
VAMP1-202ENST00000396308 GTF2H5Q6ZYL4 71 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms