RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 SPATA3Q8NHX4 192 aa7.14□□□□□ -1.27
COL4A6-203ENST00000394872 C4orf26Q17RF5 130 aa7.14□□□□□ -1.27
COL4A6-203ENST00000394872 TYMSOSQ8TAI1 123 aa7.13□□□□□ -1.27
COL4A6-203ENST00000394872 CDIP1Q9H305 208 aa7.13□□□□□ -1.27
COL4A6-203ENST00000394872 PTPRBP23467 1997 aa7.13□□□□□ -1.27
COL4A6-203ENST00000394872 Q9UF83 564 aa7.12□□□□□ -1.27
COL4A6-203ENST00000394872 Q6ZRP5 223 aa7.12□□□□□ -1.27
COL4A6-203ENST00000394872 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
COL4A6-203ENST00000394872 VPREB1P12018 145 aa7.11□□□□□ -1.27
COL4A6-203ENST00000394872 WWC2-AS2Q96NR7 200 aa7.11□□□□□ -1.27
COL4A6-203ENST00000394872 Q8NAQ8 132 aa7.11□□□□□ -1.27
COL4A6-203ENST00000394872 ELOF1P60002 83 aaKnown RBP7.1□□□□□ -1.27
COL4A6-203ENST00000394872 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
COL4A6-203ENST00000394872 LRRK2Q5S007 2527 aa7.1□□□□□ -1.27
COL4A6-203ENST00000394872 EPM2AB3EWF7 344 aa7.1□□□□□ -1.27
COL4A6-203ENST00000394872 Q8NBF4 154 aa7.1□□□□□ -1.27
COL4A6-203ENST00000394872 DOPEY1Q5JWR5 2465 aa7.08□□□□□ -1.28
COL4A6-203ENST00000394872 LINC00313P59037 77 aa7.08□□□□□ -1.28
COL4A6-203ENST00000394872 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
COL4A6-203ENST00000394872 A0A1B0GU69 56 aa7.08□□□□□ -1.28
COL4A6-203ENST00000394872 ACYP2P14621 99 aa7.08□□□□□ -1.28
COL4A6-203ENST00000394872 Q6ZRX8 168 aa7.08□□□□□ -1.28
COL4A6-203ENST00000394872 LINC00476Q8WZB0 136 aa7.08□□□□□ -1.28
COL4A6-203ENST00000394872 SRCAPQ6ZRS2 3230 aa7.08□□□□□ -1.28
COL4A6-203ENST00000394872 PLA2G1BP04054 148 aaKnown RBP7.07□□□□□ -1.28
COL4A6-203ENST00000394872 J3QL48 77 aa7.07□□□□□ -1.28
COL4A6-203ENST00000394872 MUC4Q99102 2169 aa7.06□□□□□ -1.28
COL4A6-203ENST00000394872 FAM218AQ96MZ4 157 aa7.06□□□□□ -1.28
COL4A6-203ENST00000394872 ST20-AS1Q8NBB2 130 aa7.05□□□□□ -1.28
COL4A6-203ENST00000394872 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
COL4A6-203ENST00000394872 GVQW2A0A096LPI5 108 aaPredicted RBP7.05□□□□□ -1.28
COL4A6-203ENST00000394872 BCE1O60756 84 aa7.05□□□□□ -1.28
COL4A6-203ENST00000394872 JMJD1CQ15652 2540 aa7.04□□□□□ -1.28
COL4A6-203ENST00000394872 EP400Q96L91 3159 aa7.04□□□□□ -1.28
COL4A6-203ENST00000394872 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
COL4A6-203ENST00000394872 Q96NJ1 140 aa7.04□□□□□ -1.28
COL4A6-203ENST00000394872 TLN1Q9Y490 2541 aaKnown RBP7.03□□□□□ -1.28
COL4A6-203ENST00000394872 A0A1B0GW54 56 aa7.03□□□□□ -1.28
COL4A6-203ENST00000394872 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
COL4A6-203ENST00000394872 MYO9AB2RTY4 2548 aa7.03□□□□□ -1.28
COL4A6-203ENST00000394872 Q6ZQT0 140 aa7.03□□□□□ -1.28
COL4A6-203ENST00000394872 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
COL4A6-203ENST00000394872 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
COL4A6-203ENST00000394872 ABCA12Q86UK0 2595 aa7.01□□□□□ -1.29
COL4A6-203ENST00000394872 FAM168BA1KXE4 195 aa7.01□□□□□ -1.29
COL4A6-203ENST00000394872 ZFYVE26Q68DK2 2539 aa7.01□□□□□ -1.29
COL4A6-203ENST00000394872 LOC110117498A0A087WWA1 95 aa7□□□□□ -1.29
COL4A6-203ENST00000394872 FN1P02751 2386 aaKnown RBP6.99□□□□□ -1.29
COL4A6-203ENST00000394872 PCSK5Q92824 1860 aa6.99□□□□□ -1.29
COL4A6-203ENST00000394872 KRTAP10-11P60412 298 aa6.99□□□□□ -1.29
COL4A6-203ENST00000394872 SMCPP49901 116 aaPredicted RBP6.98□□□□□ -1.29
COL4A6-203ENST00000394872 H3BPC8 53 aa6.98□□□□□ -1.29
COL4A6-203ENST00000394872 TRAV22A0A0B4J277 110 aa6.97□□□□□ -1.29
COL4A6-203ENST00000394872 K7EIL1 84 aa6.97□□□□□ -1.29
COL4A6-203ENST00000394872 WDR87Q6ZQQ6 2873 aa6.96□□□□□ -1.3
COL4A6-203ENST00000394872 IGLV8-61A0A075B6I0 122 aa6.94□□□□□ -1.3
COL4A6-203ENST00000394872 C8orf87E5RJ46 101 aa6.94□□□□□ -1.3
COL4A6-203ENST00000394872 COX6B2Q6YFQ2 88 aa6.94□□□□□ -1.3
COL4A6-203ENST00000394872 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
COL4A6-203ENST00000394872 CSNK1G2-AS1Q8NCQ2 148 aa6.93□□□□□ -1.3
COL4A6-203ENST00000394872 IGLV6-57P01721 117 aa6.93□□□□□ -1.3
COL4A6-203ENST00000394872 PRO0461Q9UI25 63 aa6.93□□□□□ -1.3
COL4A6-203ENST00000394872 IGLV1-50A0A075B6I6 118 aa6.92□□□□□ -1.3
COL4A6-203ENST00000394872 A8MWP4 228 aa6.92□□□□□ -1.3
COL4A6-203ENST00000394872 KLK9Q2XQG4 91 aa6.92□□□□□ -1.3
COL4A6-203ENST00000394872 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
COL4A6-203ENST00000394872 TLN2Q9Y4G6 2542 aa6.92□□□□□ -1.3
COL4A6-203ENST00000394872 TM2D3Q9BRN9 247 aa6.92□□□□□ -1.3
COL4A6-203ENST00000394872 C19orf73Q9NVV2 129 aa6.91□□□□□ -1.3
COL4A6-203ENST00000394872 LOC101927531A0A1B0GV80 90 aa6.91□□□□□ -1.3
COL4A6-203ENST00000394872 MRPL34Q9BQ48 92 aaKnown RBP6.9□□□□□ -1.3
COL4A6-203ENST00000394872 KRTAP10-3P60369 221 aa6.9□□□□□ -1.31
COL4A6-203ENST00000394872 LINC00304Q8N9R0 145 aa6.9□□□□□ -1.31
COL4A6-203ENST00000394872 USP9XQ93008 2570 aaPredicted RBP6.9□□□□□ -1.31
COL4A6-203ENST00000394872 ANKRD11Q6UB99 2663 aaPredicted RBP6.89□□□□□ -1.31
COL4A6-203ENST00000394872 LITAFQ99732 161 aa6.89□□□□□ -1.31
COL4A6-203ENST00000394872 K7EQZ3 153 aa6.88□□□□□ -1.31
COL4A6-203ENST00000394872 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
COL4A6-203ENST00000394872 DSCR10P59022 87 aa6.88□□□□□ -1.31
COL4A6-203ENST00000394872 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
COL4A6-203ENST00000394872 KCNQ1DNQ9H478 68 aa6.88□□□□□ -1.31
COL4A6-203ENST00000394872 A0A087WTM6 91 aa6.87□□□□□ -1.31
COL4A6-203ENST00000394872 ZNF462Q96JM2 2506 aa6.87□□□□□ -1.31
COL4A6-203ENST00000394872 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
COL4A6-203ENST00000394872 ZNF861PO60384 105 aa6.86□□□□□ -1.31
COL4A6-203ENST00000394872 IGFL1Q6UW32 110 aa6.85□□□□□ -1.31
COL4A6-203ENST00000394872 A0A096LNT2 108 aa6.85□□□□□ -1.31
COL4A6-203ENST00000394872 OBSCN-AS1Q96MR7 158 aa6.85□□□□□ -1.31
COL4A6-203ENST00000394872 ANKRD17O75179 2603 aaKnown RBP6.84□□□□□ -1.31
COL4A6-203ENST00000394872 PRR34Q9NV39 138 aa6.83□□□□□ -1.32
COL4A6-203ENST00000394872 C9orf129Q5T035 196 aaKnown RBP6.83□□□□□ -1.32
COL4A6-203ENST00000394872 CD164Q04900 197 aa6.83□□□□□ -1.32
COL4A6-203ENST00000394872 LINC00528Q8N1L1 170 aa6.83□□□□□ -1.32
COL4A6-203ENST00000394872 A8MUN3 132 aa6.82□□□□□ -1.32
COL4A6-203ENST00000394872 SSBP3-AS1Q7Z2R9 100 aa6.82□□□□□ -1.32
COL4A6-203ENST00000394872 COA5Q86WW8 74 aa6.82□□□□□ -1.32
COL4A6-203ENST00000394872 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
COL4A6-203ENST00000394872 LINC01600Q96MT4 127 aa6.81□□□□□ -1.32
COL4A6-203ENST00000394872 GIG44P09565 113 aaPredicted RBP6.81□□□□□ -1.32
COL4A6-203ENST00000394872 LINC00336Q6ZUF6 198 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms