RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 NANOS2P60321 138 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-207ENST00000394801 INAFM2P0DMQ5 153 aa10.34□□□□□ -0.75
UBE2D3-207ENST00000394801 Q6ZTC4 211 aa10.34□□□□□ -0.75
UBE2D3-207ENST00000394801 DNAL4O96015 105 aa10.34□□□□□ -0.75
UBE2D3-207ENST00000394801 C10orf25Q5T742 122 aa10.34□□□□□ -0.75
UBE2D3-207ENST00000394801 UNQ6190/PRO20217Q6UXQ8 127 aa10.34□□□□□ -0.75
UBE2D3-207ENST00000394801 C6orf223Q8N319 242 aa10.33□□□□□ -0.76
UBE2D3-207ENST00000394801 DNAH3Q8TD57 4116 aa10.33□□□□□ -0.76
UBE2D3-207ENST00000394801 PRR3P79522 188 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-207ENST00000394801 C3orf22Q8N5N4 141 aa10.33□□□□□ -0.76
UBE2D3-207ENST00000394801 GVQW2A0A096LPI5 108 aaPredicted RBP10.32□□□□□ -0.76
UBE2D3-207ENST00000394801 UQCRQO14949 82 aa10.32□□□□□ -0.76
UBE2D3-207ENST00000394801 WFDC10BQ8IUB3 73 aa10.31□□□□□ -0.76
UBE2D3-207ENST00000394801 LECT2O14960 151 aa10.31□□□□□ -0.76
UBE2D3-207ENST00000394801 A0A1B0GX51 115 aa10.3□□□□□ -0.76
UBE2D3-207ENST00000394801 Q8NDZ9 215 aa10.3□□□□□ -0.76
UBE2D3-207ENST00000394801 LINC00526Q96FQ7 95 aa10.3□□□□□ -0.76
UBE2D3-207ENST00000394801 C9orf153Q5TBE3 101 aa10.29□□□□□ -0.76
UBE2D3-207ENST00000394801 KRTAP26-1Q6PEX3 210 aa10.29□□□□□ -0.76
UBE2D3-207ENST00000394801 TENM3Q9P273 2699 aa10.29□□□□□ -0.76
UBE2D3-207ENST00000394801 ESRGQ1W209 222 aa10.29□□□□□ -0.76
UBE2D3-207ENST00000394801 OBSCN-AS1Q96MR7 158 aa10.29□□□□□ -0.76
UBE2D3-207ENST00000394801 LINC00167Q96N53 147 aa10.29□□□□□ -0.76
UBE2D3-207ENST00000394801 GAGE2AQ6NT46 116 aa10.27□□□□□ -0.77
UBE2D3-207ENST00000394801 C11orf45Q8TAV5 145 aa10.26□□□□□ -0.77
UBE2D3-207ENST00000394801 C6orf48Q9UBA6 75 aa10.26□□□□□ -0.77
UBE2D3-207ENST00000394801 DEFB131BA0A096LNP1 70 aa10.25□□□□□ -0.77
UBE2D3-207ENST00000394801 HIST1H4AP62805 103 aaKnown RBP10.25□□□□□ -0.77
UBE2D3-207ENST00000394801 COX7CP15954 63 aa10.25□□□□□ -0.77
UBE2D3-207ENST00000394801 Q8N814 137 aa10.25□□□□□ -0.77
UBE2D3-207ENST00000394801 ORMDL1Q9P0S3 153 aa10.25□□□□□ -0.77
UBE2D3-207ENST00000394801 NCR3O14931 201 aa10.24□□□□□ -0.77
UBE2D3-207ENST00000394801 C9orf129Q5T035 196 aaKnown RBP10.24□□□□□ -0.77
UBE2D3-207ENST00000394801 LINC01556Q5JQF7 62 aa10.24□□□□□ -0.77
UBE2D3-207ENST00000394801 SLPIP03973 132 aa10.23□□□□□ -0.77
UBE2D3-207ENST00000394801 S100A7L2Q5SY68 101 aa10.23□□□□□ -0.77
UBE2D3-207ENST00000394801 ATOX1O00244 68 aa10.23□□□□□ -0.77
UBE2D3-207ENST00000394801 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
UBE2D3-207ENST00000394801 C2orf48Q96LS8 159 aa10.23□□□□□ -0.77
UBE2D3-207ENST00000394801 C6orf99Q4VX62 202 aa10.22□□□□□ -0.77
UBE2D3-207ENST00000394801 ZNF561-AS1K7EIQ3 104 aa10.22□□□□□ -0.77
UBE2D3-207ENST00000394801 CRYGAP11844 174 aa10.21□□□□□ -0.77
UBE2D3-207ENST00000394801 C15orf56Q8N910 161 aa10.21□□□□□ -0.78
UBE2D3-207ENST00000394801 NOTCH1P46531 2555 aa10.2□□□□□ -0.78
UBE2D3-207ENST00000394801 CAMK2N2Q96S95 79 aa10.19□□□□□ -0.78
UBE2D3-207ENST00000394801 HIGD2BQ4VC39 106 aa10.19□□□□□ -0.78
UBE2D3-207ENST00000394801 Q6JHZ5 121 aa10.19□□□□□ -0.78
UBE2D3-207ENST00000394801 LINC00575Q6W349 94 aa10.19□□□□□ -0.78
UBE2D3-207ENST00000394801 C14orf132Q9NPU4 83 aa10.19□□□□□ -0.78
UBE2D3-207ENST00000394801 TMEM256-PLSCR3K7ERE1 68 aa10.18□□□□□ -0.78
UBE2D3-207ENST00000394801 RPL18AQ02543 176 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-207ENST00000394801 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
UBE2D3-207ENST00000394801 COL6A5A8TX70 2615 aa10.18□□□□□ -0.78
UBE2D3-207ENST00000394801 DNAH10OSP0CZ25 163 aa10.17□□□□□ -0.78
UBE2D3-207ENST00000394801 F8WDY8 70 aa10.17□□□□□ -0.78
UBE2D3-207ENST00000394801 XAGE1AQ9HD64 81 aa10.17□□□□□ -0.78
UBE2D3-207ENST00000394801 Q6ZRU5 148 aa10.16□□□□□ -0.78
UBE2D3-207ENST00000394801 TM2D3Q9BRN9 247 aa10.16□□□□□ -0.78
UBE2D3-207ENST00000394801 NBEAL1Q6ZS30 2694 aa10.16□□□□□ -0.78
UBE2D3-207ENST00000394801 JMJD7-PLA2G4BH0Y9G9 81 aa10.16□□□□□ -0.78
UBE2D3-207ENST00000394801 TRAV10A0A0B4J240 114 aa10.15□□□□□ -0.78
UBE2D3-207ENST00000394801 LINC00846Q9NV44 126 aa10.15□□□□□ -0.78
UBE2D3-207ENST00000394801 TRBV10-3A0A0K0K1G6 114 aa10.14□□□□□ -0.79
UBE2D3-207ENST00000394801 NDUFC2-KCTD14E9PQ53 114 aa10.14□□□□□ -0.79
UBE2D3-207ENST00000394801 J3KT08 172 aa10.14□□□□□ -0.79
UBE2D3-207ENST00000394801 IGKV2D-24A0A075B6R9 120 aa10.14□□□□□ -0.79
UBE2D3-207ENST00000394801 hADV29S1A0JD25 119 aa10.14□□□□□ -0.79
UBE2D3-207ENST00000394801 VPREB1P12018 145 aa10.14□□□□□ -0.79
UBE2D3-207ENST00000394801 RPS28P62857 69 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-207ENST00000394801 TRAV23DV6A0A075B6W5 121 aa10.12□□□□□ -0.79
UBE2D3-207ENST00000394801 IGKV3D-7A0A0C4DH55 119 aa10.12□□□□□ -0.79
UBE2D3-207ENST00000394801 SERP2Q8N6R1 65 aa10.12□□□□□ -0.79
UBE2D3-207ENST00000394801 HUWE1Q7Z6Z7 4374 aaKnown RBP10.12□□□□□ -0.79
UBE2D3-207ENST00000394801 CCKP06307 115 aa10.11□□□□□ -0.79
UBE2D3-207ENST00000394801 K7EIL1 84 aa10.11□□□□□ -0.79
UBE2D3-207ENST00000394801 PRB2P02812 416 aaPredicted RBP10.1□□□□□ -0.79
UBE2D3-207ENST00000394801 TRBV7-6A0A0J9YX20 115 aa10.1□□□□□ -0.79
UBE2D3-207ENST00000394801 M0R378 163 aa10.1□□□□□ -0.79
UBE2D3-207ENST00000394801 DIRC1Q969H9 104 aa10.1□□□□□ -0.79
UBE2D3-207ENST00000394801 LINC00588Q9Y4M8 146 aa10.1□□□□□ -0.79
UBE2D3-207ENST00000394801 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
UBE2D3-207ENST00000394801 ZNF73O43830 326 aaPredicted RBP10.09□□□□□ -0.79
UBE2D3-207ENST00000394801 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
UBE2D3-207ENST00000394801 H3BQ85 93 aa10.08□□□□□ -0.8
UBE2D3-207ENST00000394801 Q6ZRP5 223 aa10.08□□□□□ -0.8
UBE2D3-207ENST00000394801 TMEM258P61165 79 aa10.08□□□□□ -0.8
UBE2D3-207ENST00000394801 UPK3BQ9BT76 320 aa10.08□□□□□ -0.8
UBE2D3-207ENST00000394801 DNAH1Q9P2D7 4330 aa10.07□□□□□ -0.8
UBE2D3-207ENST00000394801 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
UBE2D3-207ENST00000394801 ELOF1P60002 83 aaKnown RBP10.07□□□□□ -0.8
UBE2D3-207ENST00000394801 A0A087WVE0 104 aa10.06□□□□□ -0.8
UBE2D3-207ENST00000394801 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
UBE2D3-207ENST00000394801 MDFIQ99750 246 aa10.06□□□□□ -0.8
UBE2D3-207ENST00000394801 CYSTM1Q9H1C7 97 aa10.06□□□□□ -0.8
UBE2D3-207ENST00000394801 COX7BP24311 80 aa10.05□□□□□ -0.8
UBE2D3-207ENST00000394801 Q6ZQY7 126 aa10.05□□□□□ -0.8
UBE2D3-207ENST00000394801 MRAPQ8TCY5 172 aa10.05□□□□□ -0.8
UBE2D3-207ENST00000394801 TLX1NBP0CAT3 122 aa10.04□□□□□ -0.8
UBE2D3-207ENST00000394801 ATP5EP2Q5VTU8 51 aa10.04□□□□□ -0.8
UBE2D3-207ENST00000394801 RBM3P98179 157 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms