RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 C11orf45Q8TAV5 145 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 TM2D3Q9BRN9 247 aa4.79□□□□□ -1.64
RTN4-205ENST00000394609 CSDC2Q9Y534 153 aaKnown RBP4.79□□□□□ -1.64
RTN4-205ENST00000394609 PRSS2P07478 247 aa4.78□□□□□ -1.64
RTN4-205ENST00000394609 OR13C6PQ8NH95 151 aa4.78□□□□□ -1.64
RTN4-205ENST00000394609 TMEM258P61165 79 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 COX6A2Q02221 97 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 FAM19A3Q7Z5A8 133 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 STAB2Q8WWQ8 2551 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 HERVK_113P63121 156 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 LINC00242Q5T6M2 205 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 CLEC2BQ92478 149 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 CDKN2A-AS1Q9UH64 79 aa4.77□□□□□ -1.65
RTN4-205ENST00000394609 DEFB131BA0A096LNP1 70 aa4.76□□□□□ -1.65
RTN4-205ENST00000394609 TRAV8-3A0A0A6YYJ7 113 aa4.76□□□□□ -1.65
RTN4-205ENST00000394609 C2orf48Q96LS8 159 aa4.76□□□□□ -1.65
RTN4-205ENST00000394609 IGLV5-39A0A0G2JS06 123 aa4.75□□□□□ -1.65
RTN4-205ENST00000394609 GAGE2AQ6NT46 116 aa4.75□□□□□ -1.65
RTN4-205ENST00000394609 CLPSL2Q6UWE3 100 aa4.75□□□□□ -1.65
RTN4-205ENST00000394609 NDUFC2-KCTD14E9PQ53 114 aa4.75□□□□□ -1.65
RTN4-205ENST00000394609 Q6JHZ5 121 aa4.75□□□□□ -1.65
RTN4-205ENST00000394609 LYPD5Q6UWN5 251 aa4.75□□□□□ -1.65
RTN4-205ENST00000394609 LINC00308Q8TCZ7 52 aa4.75□□□□□ -1.65
RTN4-205ENST00000394609 A0A1B0GUV1 79 aa4.74□□□□□ -1.65
RTN4-205ENST00000394609 BAALC-AS2P0C853 105 aa4.74□□□□□ -1.65
RTN4-205ENST00000394609 RPL18AQ02543 176 aaKnown RBP4.74□□□□□ -1.65
RTN4-205ENST00000394609 LELP1Q5T871 98 aa4.74□□□□□ -1.65
RTN4-205ENST00000394609 SMCR5Q8TEV8 140 aa4.74□□□□□ -1.65
RTN4-205ENST00000394609 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
RTN4-205ENST00000394609 HUWE1Q7Z6Z7 4374 aaKnown RBP4.73□□□□□ -1.65
RTN4-205ENST00000394609 TRAV13-2A0A0B4J235 113 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 H3BNG1 76 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
RTN4-205ENST00000394609 RPL28P46779 137 aaKnown RBP4.73□□□□□ -1.65
RTN4-205ENST00000394609 FAM19A5Q7Z5A7 132 aaPredicted RBP4.73□□□□□ -1.65
RTN4-205ENST00000394609 LINC00269Q8N2A0 174 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 SERP2Q8N6R1 65 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 COL7A1Q02388 2944 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 DNHD1Q96M86 4753 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 LINC00959A0A1B0GUT2 108 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 XCL1P47992 114 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 ESRGQ1W209 222 aa4.73□□□□□ -1.65
RTN4-205ENST00000394609 IGLV10-54A0A075B6I4 117 aa4.72□□□□□ -1.65
RTN4-205ENST00000394609 TRAV10A0A0B4J240 114 aa4.72□□□□□ -1.65
RTN4-205ENST00000394609 H0YGX0 51 aa4.72□□□□□ -1.65
RTN4-205ENST00000394609 BCE1O60756 84 aa4.72□□□□□ -1.65
RTN4-205ENST00000394609 ATP5EP2Q5VTU8 51 aa4.72□□□□□ -1.65
RTN4-205ENST00000394609 WFDC10BQ8IUB3 73 aa4.72□□□□□ -1.65
RTN4-205ENST00000394609 B9D2Q9BPU9 175 aa4.72□□□□□ -1.65
RTN4-205ENST00000394609 MEGF8Q7Z7M0 2845 aa4.72□□□□□ -1.65
RTN4-205ENST00000394609 IGHV3OR16-9A0A0B4J2B5 98 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 SMIM1B2RUZ4 78 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 S100A7L2Q5SY68 101 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 ZNF625Q96I27 306 aaPredicted RBP4.71□□□□□ -1.66
RTN4-205ENST00000394609 WWC2-AS2Q96NR7 200 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 KLK12Q9UKR0 248 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 C22orf24Q9Y442 160 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 MALP21145 153 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 REG3AQ06141 175 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 SS18Q15532 418 aa4.71□□□□□ -1.66
RTN4-205ENST00000394609 NDUFC2O95298 119 aa4.7□□□□□ -1.66
RTN4-205ENST00000394609 DNAL4O96015 105 aa4.7□□□□□ -1.66
RTN4-205ENST00000394609 DPH3Q96FX2 82 aa4.7□□□□□ -1.66
RTN4-205ENST00000394609 UPK3BQ9BT76 320 aa4.7□□□□□ -1.66
RTN4-205ENST00000394609 TRBV10-3A0A0K0K1G6 114 aa4.69□□□□□ -1.66
RTN4-205ENST00000394609 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
RTN4-205ENST00000394609 Q9H8V8 135 aa4.69□□□□□ -1.66
RTN4-205ENST00000394609 TOMM7Q9P0U1 55 aa4.69□□□□□ -1.66
RTN4-205ENST00000394609 KLK5Q9Y337 293 aaPredicted RBP4.69□□□□□ -1.66
RTN4-205ENST00000394609 DNAH9Q9NYC9 4486 aa4.69□□□□□ -1.66
RTN4-205ENST00000394609 A0A087WZ39 114 aa4.69□□□□□ -1.66
RTN4-205ENST00000394609 ENHOQ6UWT2 76 aa4.69□□□□□ -1.66
RTN4-205ENST00000394609 A0A0U1RRA0 63 aa4.68□□□□□ -1.66
RTN4-205ENST00000394609 CRPP02741 224 aa4.68□□□□□ -1.66
RTN4-205ENST00000394609 LOC107984640A0A0U1RRK4 108 aa4.67□□□□□ -1.66
RTN4-205ENST00000394609 hADV29S1A0JD25 119 aa4.67□□□□□ -1.66
RTN4-205ENST00000394609 CD164L2Q6UWJ8 174 aa4.67□□□□□ -1.66
RTN4-205ENST00000394609 SOSTDC1Q6X4U4 206 aa4.67□□□□□ -1.66
RTN4-205ENST00000394609 COX7B2Q8TF08 81 aa4.67□□□□□ -1.66
RTN4-205ENST00000394609 PRR34Q9NV39 138 aa4.67□□□□□ -1.66
RTN4-205ENST00000394609 LINC00588Q9Y4M8 146 aa4.67□□□□□ -1.66
RTN4-205ENST00000394609 NPC2P61916 151 aa4.66□□□□□ -1.66
RTN4-205ENST00000394609 EPM2AB3EWF7 344 aa4.66□□□□□ -1.66
RTN4-205ENST00000394609 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
RTN4-205ENST00000394609 JMJD7-PLA2G4BH0Y9G9 81 aa4.66□□□□□ -1.66
RTN4-205ENST00000394609 CCL18P55774 89 aa4.66□□□□□ -1.66
RTN4-205ENST00000394609 KRTAP21-3Q3LHN1 58 aa4.66□□□□□ -1.66
RTN4-205ENST00000394609 FAM218AQ96MZ4 157 aa4.66□□□□□ -1.66
RTN4-205ENST00000394609 PRKDCP78527 4128 aaKnown RBP4.66□□□□□ -1.66
RTN4-205ENST00000394609 TENM2Q9NT68 2774 aa4.65□□□□□ -1.66
RTN4-205ENST00000394609 C6orf226Q5I0X4 101 aa4.65□□□□□ -1.66
RTN4-205ENST00000394609 LINC01556Q5JQF7 62 aa4.65□□□□□ -1.66
RTN4-205ENST00000394609 LINC00167Q96N53 147 aa4.65□□□□□ -1.66
RTN4-205ENST00000394609 CCKP06307 115 aa4.64□□□□□ -1.67
RTN4-205ENST00000394609 LINC01561Q8N1V8 128 aa4.64□□□□□ -1.67
RTN4-205ENST00000394609 FBN3Q75N90 2809 aa4.64□□□□□ -1.67
RTN4-205ENST00000394609 IBA57-AS1B1ANH7 110 aa4.64□□□□□ -1.67
RTN4-205ENST00000394609 DNAH10OSP0CZ25 163 aa4.64□□□□□ -1.67
RTN4-205ENST00000394609 Q9HAA7 133 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms