RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CYSRT1A8MQ03 144 aa12.74□□□□□ -0.37
CBX1-202ENST00000393408 PRR34Q9NV39 138 aa12.74□□□□□ -0.37
CBX1-202ENST00000393408 SPART-AS1P0CW21 52 aa12.73□□□□□ -0.37
CBX1-202ENST00000393408 HTN3P15516 51 aa12.73□□□□□ -0.37
CBX1-202ENST00000393408 HECTD1Q9ULT8 2610 aa12.73□□□□□ -0.37
CBX1-202ENST00000393408 CRYGAP11844 174 aa12.72□□□□□ -0.37
CBX1-202ENST00000393408 KLK12Q9UKR0 248 aa12.72□□□□□ -0.37
CBX1-202ENST00000393408 IGLV6-57P01721 117 aa12.71□□□□□ -0.38
CBX1-202ENST00000393408 ENHOQ6UWT2 76 aa12.7□□□□□ -0.38
CBX1-202ENST00000393408 hADV29S1A0JD25 119 aa12.7□□□□□ -0.38
CBX1-202ENST00000393408 USP17L23D6RBM5 183 aa12.69□□□□□ -0.38
CBX1-202ENST00000393408 ATP5EP2Q5VTU8 51 aa12.69□□□□□ -0.38
CBX1-202ENST00000393408 NOTCH2Q04721 2471 aa12.68□□□□□ -0.38
CBX1-202ENST00000393408 GVQW2A0A096LPI5 108 aaPredicted RBP12.68□□□□□ -0.38
CBX1-202ENST00000393408 LYPD5Q6UWN5 251 aa12.68□□□□□ -0.38
CBX1-202ENST00000393408 ZNF561-AS1K7EIQ3 104 aa12.67□□□□□ -0.38
CBX1-202ENST00000393408 SERP2Q8N6R1 65 aa12.67□□□□□ -0.38
CBX1-202ENST00000393408 INAFM1C9JVW0 142 aa12.66□□□□□ -0.38
CBX1-202ENST00000393408 Q6ZQT0 140 aa12.66□□□□□ -0.38
CBX1-202ENST00000393408 C6orf48Q9UBA6 75 aa12.66□□□□□ -0.38
CBX1-202ENST00000393408 TENM1Q9UKZ4 2725 aa12.65□□□□□ -0.38
CBX1-202ENST00000393408 RBM3P98179 157 aaKnown RBP12.65□□□□□ -0.38
CBX1-202ENST00000393408 LOC110117498A0A087WWA1 95 aa12.64□□□□□ -0.39
CBX1-202ENST00000393408 UBL5Q9BZL1 73 aa12.63□□□□□ -0.39
CBX1-202ENST00000393408 TRBV10-3A0A0K0K1G6 114 aa12.63□□□□□ -0.39
CBX1-202ENST00000393408 WFDC9Q8NEX5 89 aa12.63□□□□□ -0.39
CBX1-202ENST00000393408 CYSTM1Q9H1C7 97 aa12.63□□□□□ -0.39
CBX1-202ENST00000393408 UPK3BQ9BT76 320 aa12.62□□□□□ -0.39
CBX1-202ENST00000393408 LAMTOR3Q9UHA4 124 aa12.62□□□□□ -0.39
CBX1-202ENST00000393408 XAGE1AQ9HD64 81 aa12.61□□□□□ -0.39
CBX1-202ENST00000393408 Q6ZQY7 126 aa12.61□□□□□ -0.39
CBX1-202ENST00000393408 FAM19A1Q7Z5A9 133 aa12.61□□□□□ -0.39
CBX1-202ENST00000393408 TRAV23DV6A0A075B6W5 121 aa12.6□□□□□ -0.39
CBX1-202ENST00000393408 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
CBX1-202ENST00000393408 WIPF1O43516 503 aa12.58□□□□□ -0.4
CBX1-202ENST00000393408 H3BQ85 93 aa12.58□□□□□ -0.4
CBX1-202ENST00000393408 M0R2N4 97 aa12.58□□□□□ -0.4
CBX1-202ENST00000393408 HIVEP1P15822 2718 aa12.58□□□□□ -0.4
CBX1-202ENST00000393408 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
CBX1-202ENST00000393408 WFDC10BQ8IUB3 73 aa12.56□□□□□ -0.4
CBX1-202ENST00000393408 OTOGQ6ZRI0 2925 aa12.56□□□□□ -0.4
CBX1-202ENST00000393408 ZNF73O43830 326 aaPredicted RBP12.56□□□□□ -0.4
CBX1-202ENST00000393408 GHRHP01286 108 aa12.55□□□□□ -0.4
CBX1-202ENST00000393408 KRTAP26-1Q6PEX3 210 aa12.55□□□□□ -0.4
CBX1-202ENST00000393408 DSCR8Q96T75 97 aa12.55□□□□□ -0.4
CBX1-202ENST00000393408 HIGD2BQ4VC39 106 aa12.54□□□□□ -0.4
CBX1-202ENST00000393408 VPREB1P12018 145 aa12.53□□□□□ -0.4
CBX1-202ENST00000393408 COX7BP24311 80 aa12.53□□□□□ -0.4
CBX1-202ENST00000393408 CAMK2N2Q96S95 79 aa12.53□□□□□ -0.4
CBX1-202ENST00000393408 PDE6GP18545 87 aa12.53□□□□□ -0.4
CBX1-202ENST00000393408 KPRPQ5T749 579 aaPredicted RBP12.53□□□□□ -0.4
CBX1-202ENST00000393408 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.53□□□□□ -0.4
CBX1-202ENST00000393408 H3BNG1 76 aa12.52□□□□□ -0.4
CBX1-202ENST00000393408 ELOF1P60002 83 aaKnown RBP12.52□□□□□ -0.4
CBX1-202ENST00000393408 TRBV7-6A0A0J9YX20 115 aa12.51□□□□□ -0.41
CBX1-202ENST00000393408 TMEM258P61165 79 aa12.51□□□□□ -0.41
CBX1-202ENST00000393408 EGFEM1PQ0D2K5 195 aa12.51□□□□□ -0.41
CBX1-202ENST00000393408 TEP1Q99973 2627 aaKnown RBP12.51□□□□□ -0.41
CBX1-202ENST00000393408 ATRQ13535 2644 aa12.51□□□□□ -0.41
CBX1-202ENST00000393408 J3KT08 172 aa12.51□□□□□ -0.41
CBX1-202ENST00000393408 Q6ZVQ6 151 aa12.51□□□□□ -0.41
CBX1-202ENST00000393408 TRRAPQ9Y4A5 3859 aa12.51□□□□□ -0.41
CBX1-202ENST00000393408 LOC107984640A0A0U1RRK4 108 aa12.5□□□□□ -0.41
CBX1-202ENST00000393408 LINC01547P58512 204 aaPredicted RBP12.5□□□□□ -0.41
CBX1-202ENST00000393408 Q6ZRU5 148 aa12.5□□□□□ -0.41
CBX1-202ENST00000393408 C15orf56Q8N910 161 aa12.49□□□□□ -0.41
CBX1-202ENST00000393408 RETNQ9HD89 108 aa12.49□□□□□ -0.41
CBX1-202ENST00000393408 TRBV7-4A0A0J9YYF1 115 aa12.48□□□□□ -0.41
CBX1-202ENST00000393408 M0R378 163 aa12.48□□□□□ -0.41
CBX1-202ENST00000393408 RPS28P62857 69 aaKnown RBP12.48□□□□□ -0.41
CBX1-202ENST00000393408 HAMPP81172 84 aa12.47□□□□□ -0.41
CBX1-202ENST00000393408 Q6ZTC4 211 aa12.46□□□□□ -0.41
CBX1-202ENST00000393408 NDUFC2-KCTD14E9PQ53 114 aa12.46□□□□□ -0.42
CBX1-202ENST00000393408 CXCL6P80162 114 aa12.44□□□□□ -0.42
CBX1-202ENST00000393408 ESRGQ1W209 222 aa12.44□□□□□ -0.42
CBX1-202ENST00000393408 LINC00528Q8N1L1 170 aa12.44□□□□□ -0.42
CBX1-202ENST00000393408 BCE1O60756 84 aa12.43□□□□□ -0.42
CBX1-202ENST00000393408 DPH3Q96FX2 82 aa12.43□□□□□ -0.42
CBX1-202ENST00000393408 KRTAP10-11P60412 298 aa12.41□□□□□ -0.42
CBX1-202ENST00000393408 OXLD1Q5BKU9 147 aa12.41□□□□□ -0.42
CBX1-202ENST00000393408 Q6ZRP5 223 aa12.4□□□□□ -0.42
CBX1-202ENST00000393408 C1orf43Q9BWL3 253 aa12.4□□□□□ -0.42
CBX1-202ENST00000393408 TRAV7A0A075B6U4 112 aa12.39□□□□□ -0.43
CBX1-202ENST00000393408 LINC01556Q5JQF7 62 aa12.38□□□□□ -0.43
CBX1-202ENST00000393408 FAM19A5Q7Z5A7 132 aaPredicted RBP12.38□□□□□ -0.43
CBX1-202ENST00000393408 C20orf197Q8N268 126 aa12.38□□□□□ -0.43
CBX1-202ENST00000393408 TRAV10A0A0B4J240 114 aa12.37□□□□□ -0.43
CBX1-202ENST00000393408 F8WDY8 70 aa12.37□□□□□ -0.43
CBX1-202ENST00000393408 IGKV2D-24A0A075B6R9 120 aa12.37□□□□□ -0.43
CBX1-202ENST00000393408 PKD1L1Q8TDX9 2849 aa12.36□□□□□ -0.43
CBX1-202ENST00000393408 SYCNQ0VAF6 134 aa12.35□□□□□ -0.43
CBX1-202ENST00000393408 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
CBX1-202ENST00000393408 OXTP01178 125 aa12.33□□□□□ -0.44
CBX1-202ENST00000393408 DEFB131BA0A096LNP1 70 aa12.32□□□□□ -0.44
CBX1-202ENST00000393408 KCNQ1DNQ9H478 68 aa12.31□□□□□ -0.44
CBX1-202ENST00000393408 SERTAD4-AS1Q5TG53 156 aa12.3□□□□□ -0.44
CBX1-202ENST00000393408 NKAPP1Q8N9T2 125 aa12.29□□□□□ -0.44
CBX1-202ENST00000393408 C7orf33Q8WU49 177 aa12.29□□□□□ -0.44
CBX1-202ENST00000393408 TENM3Q9P273 2699 aa12.28□□□□□ -0.44
CBX1-202ENST00000393408 C11orf45Q8TAV5 145 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms