RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 POLEQ07864 2286 aa2.14□□□□□ -2.07
PHF3-202ENST00000393387 TPRP12270 2363 aaKnown RBP2.14□□□□□ -2.07
PHF3-202ENST00000393387 MED12LQ86YW9 2145 aa2.14□□□□□ -2.07
PHF3-202ENST00000393387 APC2O95996 2303 aa2.14□□□□□ -2.07
PHF3-202ENST00000393387 FNDC1Q4ZHG4 1894 aaPredicted RBP2.14□□□□□ -2.07
PHF3-202ENST00000393387 SPANXA2-OT1Q8N9U9 137 aa2.14□□□□□ -2.07
PHF3-202ENST00000393387 C15orf56Q8N910 161 aa2.14□□□□□ -2.07
PHF3-202ENST00000393387 WNK2Q9Y3S1 2297 aa2.13□□□□□ -2.07
PHF3-202ENST00000393387 ROMO1P60602 79 aa2.13□□□□□ -2.07
PHF3-202ENST00000393387 Q8N377 158 aa2.13□□□□□ -2.07
PHF3-202ENST00000393387 PLXNA4Q9HCM2 1894 aa2.13□□□□□ -2.07
PHF3-202ENST00000393387 C2orf16Q68DN1 1984 aa2.13□□□□□ -2.07
PHF3-202ENST00000393387 NUP210Q8TEM1 1887 aaPredicted RBP2.13□□□□□ -2.07
PHF3-202ENST00000393387 HRES1P13985 223 aa2.13□□□□□ -2.07
PHF3-202ENST00000393387 LCTP09848 1927 aa2.13□□□□□ -2.07
PHF3-202ENST00000393387 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
PHF3-202ENST00000393387 A0A1W2PNU3 283 aaPredicted RBP2.12□□□□□ -2.07
PHF3-202ENST00000393387 SPATA8Q6RVD6 105 aa2.12□□□□□ -2.07
PHF3-202ENST00000393387 COL5A1P20908 1838 aaPredicted RBP2.12□□□□□ -2.07
PHF3-202ENST00000393387 PLXNA2O75051 1894 aa2.12□□□□□ -2.07
PHF3-202ENST00000393387 KIF26AQ9ULI4 1882 aaPredicted RBP2.12□□□□□ -2.07
PHF3-202ENST00000393387 TNP2Q05952 138 aa2.12□□□□□ -2.07
PHF3-202ENST00000393387 COL11A2P13942 1736 aaPredicted RBP2.12□□□□□ -2.07
PHF3-202ENST00000393387 PLXNA1Q9UIW2 1896 aa2.12□□□□□ -2.07
PHF3-202ENST00000393387 LCE2CQ5TA81 110 aa2.12□□□□□ -2.07
PHF3-202ENST00000393387 OCR1Q9BZK8 76 aa2.12□□□□□ -2.07
PHF3-202ENST00000393387 MED13Q9UHV7 2174 aa2.11□□□□□ -2.07
PHF3-202ENST00000393387 ICE1Q9Y2F5 2266 aa2.11□□□□□ -2.07
PHF3-202ENST00000393387 PTPRZ1P23471 2315 aaPredicted RBP2.11□□□□□ -2.07
PHF3-202ENST00000393387 ALPK3Q96L96 1907 aa2.11□□□□□ -2.07
PHF3-202ENST00000393387 IGLV7-46A0A075B6I9 117 aa2.11□□□□□ -2.07
PHF3-202ENST00000393387 A0A1W2PNM2 257 aa2.11□□□□□ -2.07
PHF3-202ENST00000393387 TANC1Q9C0D5 1861 aa2.11□□□□□ -2.07
PHF3-202ENST00000393387 LINC00528Q8N1L1 170 aa2.11□□□□□ -2.07
PHF3-202ENST00000393387 CACNA1GO43497 2377 aa2.11□□□□□ -2.07
PHF3-202ENST00000393387 PLXNB3Q9ULL4 1909 aa2.1□□□□□ -2.07
PHF3-202ENST00000393387 SMR3BP02814 79 aaPredicted RBP2.1□□□□□ -2.07
PHF3-202ENST00000393387 LINC00304Q8N9R0 145 aa2.1□□□□□ -2.07
PHF3-202ENST00000393387 C19orf73Q9NVV2 129 aa2.1□□□□□ -2.07
PHF3-202ENST00000393387 WWC2-AS2Q96NR7 200 aa2.1□□□□□ -2.07
PHF3-202ENST00000393387 CADP27708 2225 aa2.1□□□□□ -2.07
PHF3-202ENST00000393387 J3QL48 77 aa2.1□□□□□ -2.07
PHF3-202ENST00000393387 NCOA6Q14686 2063 aaPredicted RBP2.1□□□□□ -2.07
PHF3-202ENST00000393387 SDK2Q58EX2 2172 aa2.09□□□□□ -2.07
PHF3-202ENST00000393387 ADAMTS9Q9P2N4 1935 aa2.09□□□□□ -2.07
PHF3-202ENST00000393387 CNBPP62633 177 aaKnown RBP2.09□□□□□ -2.07
PHF3-202ENST00000393387 S4R3F8 94 aa2.09□□□□□ -2.08
PHF3-202ENST00000393387 LTBP1Q14766 1721 aa2.09□□□□□ -2.08
PHF3-202ENST00000393387 SEC61BP60468 96 aaKnown RBP2.09□□□□□ -2.08
PHF3-202ENST00000393387 SORL1Q92673 2214 aa2.09□□□□□ -2.08
PHF3-202ENST00000393387 KRTAP25-1Q3LHN0 102 aa2.08□□□□□ -2.08
PHF3-202ENST00000393387 KCNQ1DNQ9H478 68 aa2.08□□□□□ -2.08
PHF3-202ENST00000393387 TCF20Q9UGU0 1960 aaKnown RBP2.08□□□□□ -2.08
PHF3-202ENST00000393387 PCNX3Q9H6A9 2034 aa2.08□□□□□ -2.08
PHF3-202ENST00000393387 GVQW2A0A096LPI5 108 aaPredicted RBP2.08□□□□□ -2.08
PHF3-202ENST00000393387 PLCE1Q9P212 2302 aa2.08□□□□□ -2.08
PHF3-202ENST00000393387 THSD7BQ9C0I4 1608 aa2.08□□□□□ -2.08
PHF3-202ENST00000393387 A8MU10 97 aa2.08□□□□□ -2.08
PHF3-202ENST00000393387 CUL9Q8IWT3 2517 aa2.08□□□□□ -2.08
PHF3-202ENST00000393387 F5P12259 2224 aa2.07□□□□□ -2.08
PHF3-202ENST00000393387 EML5Q05BV3 1969 aa2.07□□□□□ -2.08
PHF3-202ENST00000393387 AKAP6Q13023 2319 aa2.07□□□□□ -2.08
PHF3-202ENST00000393387 M0R2T5 61 aa2.07□□□□□ -2.08
PHF3-202ENST00000393387 PTPRSQ13332 1948 aa2.07□□□□□ -2.08
PHF3-202ENST00000393387 A6NN06 94 aa2.07□□□□□ -2.08
PHF3-202ENST00000393387 KRTAP10-9P60411 292 aa2.07□□□□□ -2.08
PHF3-202ENST00000393387 SPTBN1Q01082 2364 aaKnown RBP2.06□□□□□ -2.08
PHF3-202ENST00000393387 C10orf95Q9H7T3 257 aa2.06□□□□□ -2.08
PHF3-202ENST00000393387 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.06□□□□□ -2.08
PHF3-202ENST00000393387 ATG2AQ2TAZ0 1938 aa2.06□□□□□ -2.08
PHF3-202ENST00000393387 FREM1Q5H8C1 2179 aa2.06□□□□□ -2.08
PHF3-202ENST00000393387 DOPEY2Q9Y3R5 2298 aa2.06□□□□□ -2.08
PHF3-202ENST00000393387 RAI1Q7Z5J4 1906 aaPredicted RBP2.06□□□□□ -2.08
PHF3-202ENST00000393387 NBDYA0A0U1RRE5 68 aa2.06□□□□□ -2.08
PHF3-202ENST00000393387 RPL37P61927 97 aaKnown RBP2.06□□□□□ -2.08
PHF3-202ENST00000393387 KIAA1549LQ6ZVL6 1849 aa2.06□□□□□ -2.08
PHF3-202ENST00000393387 PRRC2AP48634 2157 aaKnown RBP2.06□□□□□ -2.08
PHF3-202ENST00000393387 BRWD3Q6RI45 1802 aa2.06□□□□□ -2.08
PHF3-202ENST00000393387 CASC10Q5T4H9 136 aa2.06□□□□□ -2.08
PHF3-202ENST00000393387 Q8NDZ9 215 aa2.05□□□□□ -2.08
PHF3-202ENST00000393387 USF3Q68DE3 2245 aa2.05□□□□□ -2.08
PHF3-202ENST00000393387 CACNA1EQ15878 2313 aa2.05□□□□□ -2.08
PHF3-202ENST00000393387 R4GN34 69 aa2.05□□□□□ -2.08
PHF3-202ENST00000393387 M0QZ58 72 aa2.05□□□□□ -2.08
PHF3-202ENST00000393387 KMT2BQ9UMN6 2715 aaPredicted RBP2.04□□□□□ -2.08
PHF3-202ENST00000393387 ZNF861PO60384 105 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 Q6ZSA8 131 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 Q5W150 140 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 SPRR4Q96PI1 79 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 ABCA1O95477 2261 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 ABCA4P78363 2273 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 LRP4O75096 1905 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 MMP24-AS1A0A0U1RRL7 71 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 Q6ZR54 194 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 MED13LQ71F56 2210 aa2.04□□□□□ -2.08
PHF3-202ENST00000393387 AGRNO00468 2067 aa2.03□□□□□ -2.08
PHF3-202ENST00000393387 K7EIL1 84 aa2.03□□□□□ -2.08
PHF3-202ENST00000393387 NOTCH4Q99466 2003 aa2.03□□□□□ -2.08
PHF3-202ENST00000393387 C10orf142B7Z368 130 aa2.03□□□□□ -2.08
PHF3-202ENST00000393387 MUC4Q99102 2169 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms