RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 SBSPONQ8IVN8 264 aa9.13□□□□□ -0.95
LCA5-202ENST00000392959 PRLHP81277 87 aa9.12□□□□□ -0.95
LCA5-202ENST00000392959 LINC01556Q5JQF7 62 aa9.12□□□□□ -0.95
LCA5-202ENST00000392959 hDV103S1A0JD37 113 aa9.11□□□□□ -0.95
LCA5-202ENST00000392959 C22orf24Q9Y442 160 aa9.11□□□□□ -0.95
LCA5-202ENST00000392959 KIAA0087Q14695 138 aa9.1□□□□□ -0.95
LCA5-202ENST00000392959 SMCR5Q8TEV8 140 aa9.09□□□□□ -0.95
LCA5-202ENST00000392959 BCE1O60756 84 aa9.08□□□□□ -0.96
LCA5-202ENST00000392959 EPG5Q9HCE0 2579 aa9.08□□□□□ -0.96
LCA5-202ENST00000392959 IGLV5-52A0A0A0MRZ9 124 aa9.07□□□□□ -0.96
LCA5-202ENST00000392959 SMIM29Q86T20 159 aa9.07□□□□□ -0.96
LCA5-202ENST00000392959 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
LCA5-202ENST00000392959 C1orf64Q8NEQ6 169 aa9.06□□□□□ -0.96
LCA5-202ENST00000392959 USP24Q9UPU5 2620 aa9.06□□□□□ -0.96
LCA5-202ENST00000392959 FHL3Q13643 280 aa9.05□□□□□ -0.96
LCA5-202ENST00000392959 LINC00167Q96N53 147 aa9.04□□□□□ -0.96
LCA5-202ENST00000392959 RETNLBQ9BQ08 111 aa9.04□□□□□ -0.96
LCA5-202ENST00000392959 RPS28P62857 69 aaKnown RBP9.03□□□□□ -0.96
LCA5-202ENST00000392959 PRO0628Q9UI54 55 aa9.03□□□□□ -0.96
LCA5-202ENST00000392959 Q6ZQT0 140 aa9.02□□□□□ -0.96
LCA5-202ENST00000392959 SPINK1P00995 79 aa9.02□□□□□ -0.97
LCA5-202ENST00000392959 A0A1B0GW54 56 aa9.02□□□□□ -0.97
LCA5-202ENST00000392959 ELOF1P60002 83 aaKnown RBP9.02□□□□□ -0.97
LCA5-202ENST00000392959 LITAFQ99732 161 aa9.01□□□□□ -0.97
LCA5-202ENST00000392959 LIMD2Q9BT23 127 aa9.01□□□□□ -0.97
LCA5-202ENST00000392959 X6R8D5 127 aa9.01□□□□□ -0.97
LCA5-202ENST00000392959 KLK9Q2XQG4 91 aa9□□□□□ -0.97
LCA5-202ENST00000392959 GOLGB1Q14789 3259 aaKnown RBP8.99□□□□□ -0.97
LCA5-202ENST00000392959 LOC110117498A0A087WWA1 95 aa8.99□□□□□ -0.97
LCA5-202ENST00000392959 Q8NBF4 154 aa8.99□□□□□ -0.97
LCA5-202ENST00000392959 PCNTO95613 3336 aa8.99□□□□□ -0.97
LCA5-202ENST00000392959 C1orf134Q5TEV5 83 aa8.98□□□□□ -0.97
LCA5-202ENST00000392959 H3BNG1 76 aa8.96□□□□□ -0.97
LCA5-202ENST00000392959 FLNBO75369 2602 aaKnown RBP8.96□□□□□ -0.97
LCA5-202ENST00000392959 USP34Q70CQ2 3546 aa8.96□□□□□ -0.98
LCA5-202ENST00000392959 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.98
LCA5-202ENST00000392959 C4orf26Q17RF5 130 aa8.95□□□□□ -0.98
LCA5-202ENST00000392959 Q6ZRX8 168 aa8.95□□□□□ -0.98
LCA5-202ENST00000392959 TM2D3Q9BRN9 247 aa8.95□□□□□ -0.98
LCA5-202ENST00000392959 UTRNP46939 3433 aa8.94□□□□□ -0.98
LCA5-202ENST00000392959 COL27A1Q8IZC6 1860 aaPredicted RBP8.94□□□□□ -0.98
LCA5-202ENST00000392959 LINC00476Q8WZB0 136 aa8.93□□□□□ -0.98
LCA5-202ENST00000392959 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
LCA5-202ENST00000392959 IGKV2-30P06310 120 aa8.93□□□□□ -0.98
LCA5-202ENST00000392959 MGAM2Q2M2H8 2515 aa8.93□□□□□ -0.98
LCA5-202ENST00000392959 MOBPQ13875 183 aa8.91□□□□□ -0.98
LCA5-202ENST00000392959 H3BPC8 53 aa8.9□□□□□ -0.98
LCA5-202ENST00000392959 GVQW2A0A096LPI5 108 aaPredicted RBP8.89□□□□□ -0.99
LCA5-202ENST00000392959 ST20-AS1Q8NBB2 130 aa8.89□□□□□ -0.99
LCA5-202ENST00000392959 Q8NAQ8 132 aa8.89□□□□□ -0.99
LCA5-202ENST00000392959 EIF4EBP3O60516 100 aaPredicted RBP8.88□□□□□ -0.99
LCA5-202ENST00000392959 TRAV22A0A0B4J277 110 aa8.88□□□□□ -0.99
LCA5-202ENST00000392959 NHLRC4P0CG21 123 aaPredicted RBP8.88□□□□□ -0.99
LCA5-202ENST00000392959 A0A1B0GU69 56 aa8.88□□□□□ -0.99
LCA5-202ENST00000392959 IGLV6-57P01721 117 aa8.87□□□□□ -0.99
LCA5-202ENST00000392959 MDFIQ99750 246 aa8.87□□□□□ -0.99
LCA5-202ENST00000392959 VPREB1P12018 145 aa8.87□□□□□ -0.99
LCA5-202ENST00000392959 ACYP2P14621 99 aa8.87□□□□□ -0.99
LCA5-202ENST00000392959 FSHBP01225 129 aa8.86□□□□□ -0.99
LCA5-202ENST00000392959 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
LCA5-202ENST00000392959 PHF5AQ7RTV0 110 aaKnown RBP8.86□□□□□ -0.99
LCA5-202ENST00000392959 Q6ZRP5 223 aa8.85□□□□□ -0.99
LCA5-202ENST00000392959 COL4A2P08572 1712 aa8.85□□□□□ -0.99
LCA5-202ENST00000392959 BPTFQ12830 3046 aa8.85□□□□□ -0.99
LCA5-202ENST00000392959 EPM2AB3EWF7 344 aa8.85□□□□□ -0.99
LCA5-202ENST00000392959 SPACA4Q8TDM5 124 aa8.85□□□□□ -0.99
LCA5-202ENST00000392959 TRBV7-4A0A0J9YYF1 115 aa8.83□□□□□ -1
LCA5-202ENST00000392959 C7orf65Q6ZTY9 151 aa8.83□□□□□ -1
LCA5-202ENST00000392959 ATRQ13535 2644 aa8.83□□□□□ -1
LCA5-202ENST00000392959 C16orf90A8MZG2 172 aa8.83□□□□□ -1
LCA5-202ENST00000392959 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
LCA5-202ENST00000392959 PCSK5Q92824 1860 aa8.82□□□□□ -1
LCA5-202ENST00000392959 LINC00588Q9Y4M8 146 aa8.82□□□□□ -1
LCA5-202ENST00000392959 MAST4O15021 2626 aa8.8□□□□□ -1
LCA5-202ENST00000392959 ERC2-IT1O76042 136 aa8.79□□□□□ -1
LCA5-202ENST00000392959 HECTD1Q9ULT8 2610 aa8.79□□□□□ -1
LCA5-202ENST00000392959 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
LCA5-202ENST00000392959 CSNK1G2-AS1Q8NCQ2 148 aa8.78□□□□□ -1
LCA5-202ENST00000392959 K7EQZ3 153 aa8.78□□□□□ -1
LCA5-202ENST00000392959 CHTF8P0CG12 524 aa8.77□□□□□ -1.01
LCA5-202ENST00000392959 DNAH10OSP0CZ25 163 aa8.77□□□□□ -1.01
LCA5-202ENST00000392959 KCNQ1DNQ9H478 68 aa8.76□□□□□ -1.01
LCA5-202ENST00000392959 NBDYA0A0U1RRE5 68 aa8.76□□□□□ -1.01
LCA5-202ENST00000392959 KRTAP24-1Q3LI83 254 aa8.75□□□□□ -1.01
LCA5-202ENST00000392959 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
LCA5-202ENST00000392959 ATP11AUNQ6ZP68 121 aa8.75□□□□□ -1.01
LCA5-202ENST00000392959 A8MWP4 228 aa8.75□□□□□ -1.01
LCA5-202ENST00000392959 LINC00313P59037 77 aa8.75□□□□□ -1.01
LCA5-202ENST00000392959 FAM168BA1KXE4 195 aa8.75□□□□□ -1.01
LCA5-202ENST00000392959 KLKP1Q107X0 134 aa8.74□□□□□ -1.01
LCA5-202ENST00000392959 DNAH12Q6ZR08 3092 aa8.74□□□□□ -1.01
LCA5-202ENST00000392959 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
LCA5-202ENST00000392959 RTL8CO15255 209 aa8.73□□□□□ -1.01
LCA5-202ENST00000392959 PRR34Q9NV39 138 aa8.73□□□□□ -1.01
LCA5-202ENST00000392959 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
LCA5-202ENST00000392959 CEP350Q5VT06 3117 aa8.72□□□□□ -1.01
LCA5-202ENST00000392959 A8MUN3 132 aa8.72□□□□□ -1.01
LCA5-202ENST00000392959 GIG44P09565 113 aaPredicted RBP8.69□□□□□ -1.02
LCA5-202ENST00000392959 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
LCA5-202ENST00000392959 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms