RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 HIST1H2BJP06899 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 VPREB1P12018 145 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST1H2BOP23527 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST1H2BBP33778 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 LINC00158P58513 81 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST1H2BDP58876 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST1H2BCP62807 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST2H2BEQ16778 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST1H2BHQ93079 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST1H2BNQ99877 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 HIST1H2BMQ99879 126 aa7.16□□□□□ -1.26
RFC4-202ENST00000392481 BCE1O60756 84 aa7.15□□□□□ -1.27
RFC4-202ENST00000392481 DPM2O94777 84 aa7.15□□□□□ -1.27
RFC4-202ENST00000392481 HERV-K104P63124 156 aa7.15□□□□□ -1.27
RFC4-202ENST00000392481 RPL24P83731 157 aaKnown RBP7.15□□□□□ -1.27
RFC4-202ENST00000392481 NDUFA12Q9UI09 145 aa7.15□□□□□ -1.27
RFC4-202ENST00000392481 MAP1LC3CQ9BXW4 147 aa7.14□□□□□ -1.27
RFC4-202ENST00000392481 MYMXA0A1B0GTQ4 84 aa7.13□□□□□ -1.27
RFC4-202ENST00000392481 LINC00587B1AMM8 73 aa7.13□□□□□ -1.27
RFC4-202ENST00000392481 RPL28P46779 137 aaKnown RBP7.13□□□□□ -1.27
RFC4-202ENST00000392481 PLEKHB2Q96CS7 222 aa7.13□□□□□ -1.27
RFC4-202ENST00000392481 A0A0U1RRA0 63 aa7.12□□□□□ -1.27
RFC4-202ENST00000392481 LEPROTO15243 131 aa7.12□□□□□ -1.27
RFC4-202ENST00000392481 IGKCP01834 107 aa7.12□□□□□ -1.27
RFC4-202ENST00000392481 KRTAP1-4P0C5Y4 121 aa7.12□□□□□ -1.27
RFC4-202ENST00000392481 SMIM13P0DJ93 91 aa7.12□□□□□ -1.27
RFC4-202ENST00000392481 HERVK_113P61574 105 aa7.12□□□□□ -1.27
RFC4-202ENST00000392481 Q8NDZ9 215 aa7.12□□□□□ -1.27
RFC4-202ENST00000392481 PMCHL2Q9BQD1 86 aa7.12□□□□□ -1.27
RFC4-202ENST00000392481 IGLV1-50A0A075B6I6 118 aa7.11□□□□□ -1.27
RFC4-202ENST00000392481 IGKV2-28A0A075B6P5 120 aa7.11□□□□□ -1.27
RFC4-202ENST00000392481 IGKV2D-28P01615 120 aa7.11□□□□□ -1.27
RFC4-202ENST00000392481 TSPEAR-AS2P59090 65 aa7.11□□□□□ -1.27
RFC4-202ENST00000392481 MEIG1Q5JSS6 88 aa7.11□□□□□ -1.27
RFC4-202ENST00000392481 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
RFC4-202ENST00000392481 J3QQQ9 107 aa7.1□□□□□ -1.27
RFC4-202ENST00000392481 SYS1-DBNDD2H3BUS1 97 aa7.1□□□□□ -1.27
RFC4-202ENST00000392481 KRTAP13-1Q8IUC0 172 aa7.1□□□□□ -1.27
RFC4-202ENST00000392481 MIR7-3HGQ8N6C7 128 aa7.1□□□□□ -1.27
RFC4-202ENST00000392481 M0R378 163 aa7.09□□□□□ -1.28
RFC4-202ENST00000392481 NMUP48645 174 aa7.09□□□□□ -1.28
RFC4-202ENST00000392481 UBE2AP49459 152 aa7.09□□□□□ -1.28
RFC4-202ENST00000392481 COA6Q5JTJ3 125 aaKnown RBP7.09□□□□□ -1.28
RFC4-202ENST00000392481 BOD1L2Q8IYS8 172 aa7.09□□□□□ -1.28
RFC4-202ENST00000392481 LGALS3P17931 250 aaKnown RBP7.08□□□□□ -1.28
RFC4-202ENST00000392481 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
RFC4-202ENST00000392481 TMEM126AQ9H061 195 aa7.08□□□□□ -1.28
RFC4-202ENST00000392481 TMEM238C9JI98 176 aa7.07□□□□□ -1.28
RFC4-202ENST00000392481 LINC01545Q5VT33 79 aa7.07□□□□□ -1.28
RFC4-202ENST00000392481 PET117Q6UWS5 81 aa7.07□□□□□ -1.28
RFC4-202ENST00000392481 TMA7Q9Y2S6 64 aaKnown RBP7.07□□□□□ -1.28
RFC4-202ENST00000392481 IGKV2D-26A0A0A0MRZ7 120 aa7.06□□□□□ -1.28
RFC4-202ENST00000392481 E9PLD3 99 aa7.06□□□□□ -1.28
RFC4-202ENST00000392481 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
RFC4-202ENST00000392481 FAM19A1Q7Z5A9 133 aa7.05□□□□□ -1.28
RFC4-202ENST00000392481 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
RFC4-202ENST00000392481 NCR3O14931 201 aa7.03□□□□□ -1.28
RFC4-202ENST00000392481 C3orf79P0CE67 100 aa7.03□□□□□ -1.28
RFC4-202ENST00000392481 PRLHP81277 87 aa7.03□□□□□ -1.28
RFC4-202ENST00000392481 DAND5Q8N907 189 aa7.03□□□□□ -1.28
RFC4-202ENST00000392481 PRYO14603 147 aa7.02□□□□□ -1.29
RFC4-202ENST00000392481 CRYGAP11844 174 aa7.02□□□□□ -1.29
RFC4-202ENST00000392481 KCNQ1DNQ9H478 68 aa7.02□□□□□ -1.29
RFC4-202ENST00000392481 UBR4Q5T4S7 5183 aa7.02□□□□□ -1.29
RFC4-202ENST00000392481 LRP2P98164 4655 aa7.02□□□□□ -1.29
RFC4-202ENST00000392481 A0A087X002 238 aa7.01□□□□□ -1.29
RFC4-202ENST00000392481 A0A0J9YXY3 114 aa7.01□□□□□ -1.29
RFC4-202ENST00000392481 KRTDAPP60985 99 aa7.01□□□□□ -1.29
RFC4-202ENST00000392481 MIEN1Q9BRT3 115 aa7.01□□□□□ -1.29
RFC4-202ENST00000392481 TRBV10-3A0A0K0K1G6 114 aa7.01□□□□□ -1.29
RFC4-202ENST00000392481 TRBV10-2A0A0K0K1G8 114 aa7.01□□□□□ -1.29
RFC4-202ENST00000392481 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
RFC4-202ENST00000392481 SPRR1AP35321 89 aa7□□□□□ -1.29
RFC4-202ENST00000392481 ADAMTSL4-AS1Q5T5F5 129 aa7□□□□□ -1.29
RFC4-202ENST00000392481 LINC00337Q8N6G1 96 aa7□□□□□ -1.29
RFC4-202ENST00000392481 ANAPC11Q9NYG5 84 aa7□□□□□ -1.29
RFC4-202ENST00000392481 C20orf202A1L168 122 aa6.99□□□□□ -1.29
RFC4-202ENST00000392481 NDUFC2O95298 119 aa6.99□□□□□ -1.29
RFC4-202ENST00000392481 S100A12P80511 92 aa6.99□□□□□ -1.29
RFC4-202ENST00000392481 HIGD2AQ9BW72 106 aa6.99□□□□□ -1.29
RFC4-202ENST00000392481 SPANXB1Q9NS25 103 aaPredicted RBP6.99□□□□□ -1.29
RFC4-202ENST00000392481 KRTAP4-16G5E9R7 235 aaPredicted RBP6.98□□□□□ -1.29
RFC4-202ENST00000392481 TIMM17BO60830 172 aa6.98□□□□□ -1.29
RFC4-202ENST00000392481 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
RFC4-202ENST00000392481 ETDCA0A1B0GVM5 59 aa6.97□□□□□ -1.29
RFC4-202ENST00000392481 ZNF815PA8K554 130 aa6.97□□□□□ -1.29
RFC4-202ENST00000392481 EIF4EBP3O60516 100 aaPredicted RBP6.97□□□□□ -1.29
RFC4-202ENST00000392481 DDTP30046 118 aa6.97□□□□□ -1.29
RFC4-202ENST00000392481 SOSTDC1Q6X4U4 206 aa6.97□□□□□ -1.29
RFC4-202ENST00000392481 LITAFQ99732 161 aa6.97□□□□□ -1.29
RFC4-202ENST00000392481 AKR1D1P51857 326 aa6.96□□□□□ -1.3
RFC4-202ENST00000392481 KRTAP13-2Q52LG2 175 aa6.96□□□□□ -1.3
RFC4-202ENST00000392481 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
RFC4-202ENST00000392481 NPC2P61916 151 aa6.95□□□□□ -1.3
RFC4-202ENST00000392481 S100A7L2Q5SY68 101 aa6.95□□□□□ -1.3
RFC4-202ENST00000392481 LINC00308Q8TCZ7 52 aa6.94□□□□□ -1.3
RFC4-202ENST00000392481 SPRR4Q96PI1 79 aa6.94□□□□□ -1.3
RFC4-202ENST00000392481 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
RFC4-202ENST00000392481 ZNF706Q9Y5V0 76 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms