RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 TRAV23DV6A0A075B6W5 121 aa14.3□□□□□ -0.12
COL23A1-201ENST00000390654 IGHV4-28A0A0C4DH34 117 aa14.29□□□□□ -0.12
COL23A1-201ENST00000390654 ENHOQ6UWT2 76 aa14.29□□□□□ -0.12
COL23A1-201ENST00000390654 KLK12Q9UKR0 248 aa14.29□□□□□ -0.12
COL23A1-201ENST00000390654 XAGE1AQ9HD64 81 aa14.28□□□□□ -0.12
COL23A1-201ENST00000390654 SPAG11BQ08648 103 aa14.27□□□□□ -0.12
COL23A1-201ENST00000390654 TMEM256-PLSCR3K7ERE1 68 aa14.26□□□□□ -0.13
COL23A1-201ENST00000390654 M0R2N4 97 aa14.26□□□□□ -0.13
COL23A1-201ENST00000390654 LAMTOR3Q9UHA4 124 aa14.26□□□□□ -0.13
COL23A1-201ENST00000390654 CYSRT1A8MQ03 144 aa14.25□□□□□ -0.13
COL23A1-201ENST00000390654 JMJD7-PLA2G4BH0Y9G9 81 aa14.23□□□□□ -0.13
COL23A1-201ENST00000390654 STAB1Q9NY15 2570 aa14.21□□□□□ -0.13
COL23A1-201ENST00000390654 NDUFC2O95298 119 aa14.21□□□□□ -0.13
COL23A1-201ENST00000390654 CRYGAP11844 174 aa14.21□□□□□ -0.13
COL23A1-201ENST00000390654 SERP2Q8N6R1 65 aa14.21□□□□□ -0.13
COL23A1-201ENST00000390654 NOTCH1P46531 2555 aa14.21□□□□□ -0.14
COL23A1-201ENST00000390654 COX17Q14061 63 aa14.2□□□□□ -0.14
COL23A1-201ENST00000390654 LINC00167Q96N53 147 aa14.2□□□□□ -0.14
COL23A1-201ENST00000390654 LYRM9A8MSI8 78 aa14.2□□□□□ -0.14
COL23A1-201ENST00000390654 LINC00575Q6W349 94 aa14.2□□□□□ -0.14
COL23A1-201ENST00000390654 Q6ZQY7 126 aa14.2□□□□□ -0.14
COL23A1-201ENST00000390654 SMIM9A6NGZ8 99 aa14.19□□□□□ -0.14
COL23A1-201ENST00000390654 F8P00451 2351 aa14.19□□□□□ -0.14
COL23A1-201ENST00000390654 GHRHP01286 108 aa14.18□□□□□ -0.14
COL23A1-201ENST00000390654 HAMPP81172 84 aa14.17□□□□□ -0.14
COL23A1-201ENST00000390654 RBM3P98179 157 aaKnown RBP14.17□□□□□ -0.14
COL23A1-201ENST00000390654 HIGD2BQ4VC39 106 aa14.17□□□□□ -0.14
COL23A1-201ENST00000390654 DSCR8Q96T75 97 aa14.17□□□□□ -0.14
COL23A1-201ENST00000390654 UBL5Q9BZL1 73 aa14.17□□□□□ -0.14
COL23A1-201ENST00000390654 C9orf66Q5T8R8 295 aa14.16□□□□□ -0.14
COL23A1-201ENST00000390654 TRBV10-3A0A0K0K1G6 114 aa14.15□□□□□ -0.14
COL23A1-201ENST00000390654 UPK3BQ9BT76 320 aa14.14□□□□□ -0.15
COL23A1-201ENST00000390654 RETNQ9HD89 108 aa14.14□□□□□ -0.15
COL23A1-201ENST00000390654 MAST4O15021 2626 aa14.14□□□□□ -0.15
COL23A1-201ENST00000390654 TENM3Q9P273 2699 aa14.14□□□□□ -0.15
COL23A1-201ENST00000390654 SCXQ7RTU7 201 aa14.12□□□□□ -0.15
COL23A1-201ENST00000390654 KMT2BQ9UMN6 2715 aaPredicted RBP14.12□□□□□ -0.15
COL23A1-201ENST00000390654 FBN1P35555 2871 aaKnown RBP14.11□□□□□ -0.15
COL23A1-201ENST00000390654 Q8NAQ8 132 aa14.11□□□□□ -0.15
COL23A1-201ENST00000390654 C6orf48Q9UBA6 75 aa14.11□□□□□ -0.15
COL23A1-201ENST00000390654 Q6ZQT0 140 aa14.11□□□□□ -0.15
COL23A1-201ENST00000390654 FAM19A5Q7Z5A7 132 aaPredicted RBP14.11□□□□□ -0.15
COL23A1-201ENST00000390654 J3KT08 172 aa14.1□□□□□ -0.15
COL23A1-201ENST00000390654 APOC4P55056 127 aa14.1□□□□□ -0.15
COL23A1-201ENST00000390654 C20orf197Q8N268 126 aa14.09□□□□□ -0.15
COL23A1-201ENST00000390654 IGHV4-30-4P0DP06 118 aa14.09□□□□□ -0.15
COL23A1-201ENST00000390654 SPART-AS1P0CW21 52 aa14.09□□□□□ -0.15
COL23A1-201ENST00000390654 LELP1Q5T871 98 aa14.09□□□□□ -0.15
COL23A1-201ENST00000390654 OXLD1Q5BKU9 147 aa14.08□□□□□ -0.16
COL23A1-201ENST00000390654 ZNF561-AS1K7EIQ3 104 aa14.07□□□□□ -0.16
COL23A1-201ENST00000390654 IGLV6-57P01721 117 aa14.06□□□□□ -0.16
COL23A1-201ENST00000390654 WFDC10BQ8IUB3 73 aa14.06□□□□□ -0.16
COL23A1-201ENST00000390654 A0A0J9YWU9 116 aa14.04□□□□□ -0.16
COL23A1-201ENST00000390654 LINC01547P58512 204 aaPredicted RBP14.04□□□□□ -0.16
COL23A1-201ENST00000390654 Q6ZVQ6 151 aa14.04□□□□□ -0.16
COL23A1-201ENST00000390654 DPH3Q96FX2 82 aa14.04□□□□□ -0.16
COL23A1-201ENST00000390654 LYPD5Q6UWN5 251 aa14.03□□□□□ -0.16
COL23A1-201ENST00000390654 DIRC1Q969H9 104 aa14.03□□□□□ -0.16
COL23A1-201ENST00000390654 CAMK2N2Q96S95 79 aa14.03□□□□□ -0.16
COL23A1-201ENST00000390654 OXTP01178 125 aa14.02□□□□□ -0.16
COL23A1-201ENST00000390654 TRAV10A0A0B4J240 114 aa14.01□□□□□ -0.17
COL23A1-201ENST00000390654 ZNF73O43830 326 aaPredicted RBP14.01□□□□□ -0.17
COL23A1-201ENST00000390654 PRR34Q9NV39 138 aa14.01□□□□□ -0.17
COL23A1-201ENST00000390654 MIFP14174 115 aa14.01□□□□□ -0.17
COL23A1-201ENST00000390654 ATP5EP2Q5VTU8 51 aa14□□□□□ -0.17
COL23A1-201ENST00000390654 TMEM258P61165 79 aa13.99□□□□□ -0.17
COL23A1-201ENST00000390654 MUC7Q8TAX7 377 aa13.98□□□□□ -0.17
COL23A1-201ENST00000390654 COX7BP24311 80 aa13.97□□□□□ -0.17
COL23A1-201ENST00000390654 Q6ZRU5 148 aa13.97□□□□□ -0.17
COL23A1-201ENST00000390654 SNURFQ9Y675 71 aa13.97□□□□□ -0.17
COL23A1-201ENST00000390654 LOC110117498A0A087WWA1 95 aa13.95□□□□□ -0.18
COL23A1-201ENST00000390654 Q8N9L7 120 aa13.94□□□□□ -0.18
COL23A1-201ENST00000390654 NBEAL1Q6ZS30 2694 aa13.94□□□□□ -0.18
COL23A1-201ENST00000390654 BAHCC1Q9P281 2608 aa13.94□□□□□ -0.18
COL23A1-201ENST00000390654 KPRPQ5T749 579 aaPredicted RBP13.94□□□□□ -0.18
COL23A1-201ENST00000390654 Q6ZTC4 211 aa13.94□□□□□ -0.18
COL23A1-201ENST00000390654 COL6A5A8TX70 2615 aa13.93□□□□□ -0.18
COL23A1-201ENST00000390654 DEFB105AQ8NG35 78 aa13.93□□□□□ -0.18
COL23A1-201ENST00000390654 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.92□□□□□ -0.18
COL23A1-201ENST00000390654 VPREB1P12018 145 aa13.91□□□□□ -0.18
COL23A1-201ENST00000390654 ANK2Q01484 3957 aa13.9□□□□□ -0.18
COL23A1-201ENST00000390654 IGKV2D-24A0A075B6R9 120 aa13.89□□□□□ -0.19
COL23A1-201ENST00000390654 ELOF1P60002 83 aaKnown RBP13.89□□□□□ -0.19
COL23A1-201ENST00000390654 RMI2Q96E14 147 aa13.89□□□□□ -0.19
COL23A1-201ENST00000390654 GVQW2A0A096LPI5 108 aaPredicted RBP13.88□□□□□ -0.19
COL23A1-201ENST00000390654 PRB2P02812 416 aaPredicted RBP13.88□□□□□ -0.19
COL23A1-201ENST00000390654 C4orf26Q17RF5 130 aa13.87□□□□□ -0.19
COL23A1-201ENST00000390654 RPS28P62857 69 aaKnown RBP13.87□□□□□ -0.19
COL23A1-201ENST00000390654 Q6ZRP5 223 aa13.87□□□□□ -0.19
COL23A1-201ENST00000390654 C15orf56Q8N910 161 aa13.87□□□□□ -0.19
COL23A1-201ENST00000390654 TM2D3Q9BRN9 247 aa13.86□□□□□ -0.19
COL23A1-201ENST00000390654 C3orf84H3BNL1 204 aa13.85□□□□□ -0.19
COL23A1-201ENST00000390654 KRTAP10-11P60412 298 aa13.85□□□□□ -0.19
COL23A1-201ENST00000390654 ESRGQ1W209 222 aa13.85□□□□□ -0.19
COL23A1-201ENST00000390654 TRBV7-4A0A0J9YYF1 115 aa13.84□□□□□ -0.19
COL23A1-201ENST00000390654 M0R378 163 aa13.83□□□□□ -0.2
COL23A1-201ENST00000390654 TRAV7A0A075B6U4 112 aa13.82□□□□□ -0.2
COL23A1-201ENST00000390654 C1orf43Q9BWL3 253 aa13.82□□□□□ -0.2
COL23A1-201ENST00000390654 NDUFC2-KCTD14E9PQ53 114 aa13.82□□□□□ -0.2
COL23A1-201ENST00000390654 KRTAP26-1Q6PEX3 210 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms