RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 SETBP1Q9Y6X0 1596 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 PAPPAQ13219 1627 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 TARBP1Q13395 1621 aaKnown RBP0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 C5P01031 1676 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 UBR3Q6ZT12 1888 aa0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 KMT2CQ8NEZ4 4911 aaKnown RBP0.26□□□□□ -2.37
TRAJ3-201ENST00000390534 FCGBPQ9Y6R7 5405 aaPredicted RBP0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 ABCA13Q86UQ4 5058 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 PIEZO2Q9H5I5 2752 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 GVINP1Q7Z2Y8 2422 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 A0A0G2JMZ2 1700 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 MAP3K4Q9Y6R4 1608 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 NCOA2Q15596 1464 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 SPTY2D1-AS1A0A0U1RR47 76 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 UMAD1C9J7I0 102 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 I3L3M4 83 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 NDUFB1O75438 58 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 KRTAP2-3P0C7H8 128 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 COX6B1P14854 86 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 Q5BKY6 102 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 SPINK6Q6UWN8 80 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 KRTAP2-4Q9BYR9 128 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 KRTAP2-1Q9BYU5 128 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 APLNQ9ULZ1 77 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 SZT2Q5T011 3432 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 OTOGQ6ZRI0 2925 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 NOTCH1P46531 2555 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 IGF2RP11717 2491 aa0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 ZNF469Q96JG9 3925 aaPredicted RBP0.25□□□□□ -2.37
TRAJ3-201ENST00000390534 KIF20BQ96Q89 1820 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 RGPD2P0DJD1 1756 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 RGPD1P0DJD0 1748 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 TMEM131LA2VDJ0 1609 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 KIAA0556O60303 1618 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 ABCC1P33527 1531 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 MAP3K1Q13233 1512 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 LRRC9Q6ZRR7 1453 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 UNC80Q8N2C7 3258 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 CEP350Q5VT06 3117 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 HERC1Q15751 4861 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 H3BVH4 76 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 PRH1P02810 166 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 COX8AP10176 69 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 HMGA1P17096 107 aaKnown RBP0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 SPRR1AP35321 89 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 KLK9Q2XQG4 91 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 ATP5EP2Q5VTU8 51 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 HEPN1Q6WQI6 88 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 KRTAP5-2Q701N4 177 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 HILPDAQ9Y5L2 63 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 UTRNP46939 3433 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 PIEZO1Q92508 2521 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 BPTFQ12830 3046 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 ZNF831Q5JPB2 1677 aa0.24□□□□□ -2.37
TRAJ3-201ENST00000390534 URB2Q14146 1524 aaKnown RBP0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 LRRC7Q96NW7 1537 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 CNOT1A5YKK6 2376 aaKnown RBP0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 KRTAP5-8O75690 187 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 NREPQ16612 68 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 LELP1Q5T871 98 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 Q5VSD8 79 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 DEFB105AQ8NG35 78 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 SMR3AQ99954 134 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 MRPL34Q9BQ48 92 aaKnown RBP0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 FXYD6Q9H0Q3 95 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 PKD1L3Q7Z443 1732 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 FMN2Q9NZ56 1722 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 KIAA1109Q2LD37 5005 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 USP32Q8NFA0 1604 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 TNRC18O15417 2968 aaPredicted RBP0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 MUC3AQ02505 3323 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 NCOR1O75376 2440 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 UGGT2Q9NYU1 1516 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 LAMA5O15230 3695 aa0.23□□□□□ -2.37
TRAJ3-201ENST00000390534 CCDC88BA6NC98 1476 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 NKTRP30414 1462 aaKnown RBP0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 USP24Q9UPU5 2620 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 VCANP13611 3396 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 RGPD8O14715 1765 aaPredicted RBP0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 RGPD5Q99666 1765 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 PCNTO95613 3336 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 GOLGB1Q14789 3259 aaKnown RBP0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 LRRC37AA6NMS7 1700 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 LRRIQ1Q96JM4 1722 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 EYSQ5T1H1 3165 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 DNAH14Q0VDD8 3507 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 LCE6AA0A183 80 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 SPINK1P00995 79 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 RPL38P63173 70 aaKnown RBP0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 DEFB109BQ30KR1 87 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 H1FX-AS1Q4G0G2 97 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 KRTAP4-1Q9BYQ7 146 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 PIK3C2BO00750 1634 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 ALKQ9UM73 1620 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 BIVM-ERCC5R4GMW8 1640 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 CSPG4Q6UVK1 2322 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 ABCA8O94911 1581 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 CFAP74Q9C0B2 1584 aa0.22□□□□□ -2.37
TRAJ3-201ENST00000390534 DUOX2Q9NRD8 1548 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms