RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 VPS13CQ709C8 3753 aa2.35□□□□□ -2.03
TRAV39-201ENST00000390466 SVEP1Q4LDE5 3571 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 TRGV1A0A0A0MS02 117 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 TRBV6-8A0A0A6YYG3 113 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 IGHV4-28A0A0C4DH34 117 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 TRBV7-6A0A0J9YX20 115 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 LCE6AA0A183 80 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 LINC00959A0A1B0GUT2 108 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 F8WDY8 70 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 F8WEM9 126 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 ZNF561-AS1K7EIQ3 104 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 ERC2-IT1O76042 136 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 HTN1P15515 57 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 ATP5EP56381 51 aaPredicted RBP2.34□□□□□ -2.03
TRAV39-201ENST00000390466 CXCL6P80162 114 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 OCR1Q9BZK8 76 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 C19orf73Q9NVV2 129 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 LINC00474Q9P2X8 69 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 HIVEP1P15822 2718 aa2.34□□□□□ -2.03
TRAV39-201ENST00000390466 NOTCH2Q04721 2471 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 A0A0U1RQV1 116 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 B4DSR2 109 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 TMEM256-PLSCR3K7ERE1 68 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 IGLV6-57P01721 117 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 PRR3P79522 188 aaKnown RBP2.33□□□□□ -2.04
TRAV39-201ENST00000390466 MUC7Q8TAX7 377 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 C4orf3Q8WVX3 66 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 TM2D3Q9BRN9 247 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 TOMM7Q9P0U1 55 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 CELA1Q9UNI1 258 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 SNURFQ9Y675 71 aa2.33□□□□□ -2.04
TRAV39-201ENST00000390466 OTOGQ6ZRI0 2925 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 A0A1B0GUV1 79 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 NDUFC1O43677 76 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 IGKV4-1P06312 121 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 IGHV4-30-4P0DP06 118 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 MIFP14174 115 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 RPL35AP18077 110 aaKnown RBP2.32□□□□□ -2.04
TRAV39-201ENST00000390466 KRTAP1-1Q07627 177 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 KRTAP21-3Q3LHN1 58 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 C6orf99Q4VX62 202 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 Q6YL49 198 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 Q6ZTC4 211 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 ZCCHC13Q8WW36 166 aaKnown RBP2.32□□□□□ -2.04
TRAV39-201ENST00000390466 UBL5Q9BZL1 73 aa2.32□□□□□ -2.04
TRAV39-201ENST00000390466 ZNF469Q96JG9 3925 aaPredicted RBP2.32□□□□□ -2.04
TRAV39-201ENST00000390466 PDE6GP18545 87 aa2.31□□□□□ -2.04
TRAV39-201ENST00000390466 COX17Q14061 63 aa2.31□□□□□ -2.04
TRAV39-201ENST00000390466 NREPQ16612 68 aa2.31□□□□□ -2.04
TRAV39-201ENST00000390466 C10orf25Q5T742 122 aa2.31□□□□□ -2.04
TRAV39-201ENST00000390466 C16orf74Q96GX8 76 aa2.31□□□□□ -2.04
TRAV39-201ENST00000390466 C11orf68Q9H3H3 251 aaKnown RBP2.31□□□□□ -2.04
TRAV39-201ENST00000390466 NOP10Q9NPE3 64 aaKnown RBP2.31□□□□□ -2.04
TRAV39-201ENST00000390466 NIPBLQ6KC79 2804 aaeCLIP2.31□□□□□ -2.04
TRAV39-201ENST00000390466 ZANQ9Y493 2812 aa2.31□□□□□ -2.04
TRAV39-201ENST00000390466 TRGV2A0A075B6R0 118 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 GVQW2A0A096LPI5 108 aaPredicted RBP2.3□□□□□ -2.04
TRAV39-201ENST00000390466 TRGV4A0A0C4DH28 118 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 IGKV3OR2-268A0A0C4DH90 116 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 A0A0J9YWU9 116 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 hDV103S1A0JD37 113 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 PRYO14603 147 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 UBE2L6O14933 153 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 KRTAP10-9P60411 292 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 RBM3P98179 157 aaKnown RBP2.3□□□□□ -2.04
TRAV39-201ENST00000390466 OXLD1Q5BKU9 147 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 C9orf116Q5BN46 136 aaPredicted RBP2.3□□□□□ -2.04
TRAV39-201ENST00000390466 CD164L2Q6UWJ8 174 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 SCXQ7RTU7 201 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 WFDC11Q8NEX6 87 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 TMEM254Q8TBM7 123 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 DYNLRB2Q8TF09 96 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 WFDC10AQ9H1F0 79 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 DNAH1Q9P2D7 4330 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 ACANP16112 2415 aa2.3□□□□□ -2.04
TRAV39-201ENST00000390466 MAP1AP78559 2803 aaPredicted RBP2.29□□□□□ -2.04
TRAV39-201ENST00000390466 SONP18583 2426 aaKnown RBP2.29□□□□□ -2.04
TRAV39-201ENST00000390466 HIVEP2P31629 2446 aa2.29□□□□□ -2.04
TRAV39-201ENST00000390466 ELOF1P60002 83 aaKnown RBP2.29□□□□□ -2.04
TRAV39-201ENST00000390466 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
TRAV39-201ENST00000390466 Q6ZQY7 126 aa2.29□□□□□ -2.04
TRAV39-201ENST00000390466 STHQ8IWL8 128 aa2.29□□□□□ -2.04
TRAV39-201ENST00000390466 LINC01356Q8N9X3 169 aa2.29□□□□□ -2.04
TRAV39-201ENST00000390466 LINC01006Q8NI28 216 aa2.29□□□□□ -2.04
TRAV39-201ENST00000390466 CHCHD10Q8WYQ3 142 aaPredicted RBP2.29□□□□□ -2.04
TRAV39-201ENST00000390466 CCL19Q99731 98 aa2.29□□□□□ -2.04
TRAV39-201ENST00000390466 C1orf43Q9BWL3 253 aa2.29□□□□□ -2.04
TRAV39-201ENST00000390466 NF1P21359 2839 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 CCDC168Q8NDH2 2452 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 H3BQ85 93 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 CCL24O00175 119 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 BPY2O14599 106 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 IGLV1-51P01701 117 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 VPREB1P12018 145 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 COX7BP24311 80 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 TNP2Q05952 138 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 ESRGQ1W209 222 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 C6orf226Q5I0X4 101 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 KRTAP26-1Q6PEX3 210 aa2.28□□□□□ -2.04
TRAV39-201ENST00000390466 CLPSL2Q6UWE3 100 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms