RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 SNRNP25Q9BV90 132 aaKnown RBP-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 DDA1Q9BW61 102 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 GSKIPQ9P0R6 139 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 CFTRP13569 1480 aa-1.14□□□□□ -2.59
SNORD28-201ENST00000384706 CEP152O94986 1710 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 CFAP46Q8IYW2 2715 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 FABP1P07148 127 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 SCGB1A1P11684 91 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 CDC26Q8NHZ8 85 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 COPS9Q8WXC6 57 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 ARL11Q969Q4 196 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 DPH3Q96FX2 82 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 SPANXDQ9BXN6 97 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 SPANXA1Q9NS26 97 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 PSENENQ9NZ42 101 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 LINC00474Q9P2X8 69 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 CUX1P39880 1505 aa-1.15□□□□□ -2.59
SNORD28-201ENST00000384706 LRBAP50851 2863 aa-1.16□□□□□ -2.59
SNORD28-201ENST00000384706 A0A0G2JND7 137 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 TRBV7-7A0A0K0K1E9 115 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 MIF4GDA9UHW6 222 aaKnown RBP-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 TRAPPC2P0DI81 140 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 TRAPPC2BP0DI82 140 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 COPZ1P61923 177 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 GNGT1P63211 74 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 Q56UQ5 140 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 NMSQ5H8A3 153 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 SMIM15Q7Z3B0 74 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 COMMD6Q7Z4G1 85 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 TSTD1Q8NFU3 115 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 TCEAL4Q96EI5 215 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 PPP3R2Q96LZ3 170 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 MANBALQ9NQG1 85 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 LINC00846Q9NV44 126 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 CCDC167Q9P0B6 97 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 SERP1Q9Y6X1 66 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 TOP2BQ02880 1626 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 TARBP1Q13395 1621 aaKnown RBP-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 MAPKBP1O60336 1514 aa-1.16□□□□□ -2.6
SNORD28-201ENST00000384706 DIP2CQ9Y2E4 1556 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 DYNC1H1Q14204 4646 aaKnown RBP-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 A2ML1A8K2U0 1454 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 H0Y9P7 68 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 H3BQF6 201 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 CKS1BP61024 79 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 PRLHP81277 87 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 DEFB107AQ8IZN7 70 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 PP6455Q8WZ26 134 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 RERGLQ9H628 205 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 SCN11AQ9UI33 1791 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 BPTFQ12830 3046 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 PREX1Q8TCU6 1659 aa-1.17□□□□□ -2.6
SNORD28-201ENST00000384706 PHLPP1O60346 1717 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 NDUFA3O95167 84 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 COX6CP09669 75 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 NBEAP1P0C6P0 100 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 ARMS2P0C7Q2 107 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 GNG11P61952 73 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 RPS25P62851 125 aaKnown RBP-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 HSD52Q0P140 79 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 Q0VG73 95 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 C12orf57Q99622 126 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 KIF20BQ96Q89 1820 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 GRIN2AQ12879 1464 aa-1.18□□□□□ -2.6
SNORD28-201ENST00000384706 ROBO1Q9Y6N7 1651 aa-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 GNG14A0A1W2PPG7 69 aa-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 ABCC5O15440 1437 aa-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 SMR3BP02814 79 aaPredicted RBP-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 MT1EP04732 61 aa-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 CATR1Q13166 79 aa-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 CLPSL2Q6UWE3 100 aa-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 C8orf59Q8N0T1 100 aaPredicted RBP-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 UBE2D4Q9Y2X8 147 aa-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 MRC2Q9UBG0 1479 aa-1.19□□□□□ -2.6
SNORD28-201ENST00000384706 SPTBN5Q9NRC6 3674 aaKnown RBP-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 MON2Q7Z3U7 1717 aa-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 C7orf77A4D0Y5 90 aa-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 F6UZH7 168 aa-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 MT1GP13640 62 aa-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 COX6B2Q6YFQ2 88 aa-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 VAMP8Q9BV40 100 aa-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 PRO1854Q9UHT4 67 aa-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 SMG1Q96Q15 3661 aaKnown RBP-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 SHPRHQ149N8 1683 aa-1.2□□□□□ -2.6
SNORD28-201ENST00000384706 ABCA13Q86UQ4 5058 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 TLN1Q9Y490 2541 aaKnown RBP-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 DNAH8Q96JB1 4490 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 UBE2L5PA0A1B0GUS4 154 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 UBE2L3P68036 154 aaKnown RBP-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 DR1Q01658 176 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 SMIM21Q3B7S5 101 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 LZICQ8WZA0 190 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 MT1LQ93083 61 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 PFDN5Q99471 154 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 AP4S1Q9Y587 144 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 C5P01031 1676 aa-1.21□□□□□ -2.6
SNORD28-201ENST00000384706 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.22□□□□□ -2.6
SNORD28-201ENST00000384706 QSER1Q2KHR3 1735 aa-1.22□□□□□ -2.6
SNORD28-201ENST00000384706 K7EP13 123 aa-1.22□□□□□ -2.6
SNORD28-201ENST00000384706 APOC2P02655 101 aa-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms