RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
RNU1-28P-201ENST00000383861 TNP2Q05952 138 aa5.71□□□□□ -1.5
RNU1-28P-201ENST00000383861 STARD9Q9P2P6 4700 aa5.7□□□□□ -1.5
RNU1-28P-201ENST00000383861 IGLV5-52A0A0A0MRZ9 124 aa5.7□□□□□ -1.5
RNU1-28P-201ENST00000383861 C9orf118A6NHY6 69 aa5.7□□□□□ -1.5
RNU1-28P-201ENST00000383861 K7ERJ3 54 aa5.7□□□□□ -1.5
RNU1-28P-201ENST00000383861 M0R378 163 aa5.7□□□□□ -1.5
RNU1-28P-201ENST00000383861 TAX1BP3O14907 124 aa5.7□□□□□ -1.5
RNU1-28P-201ENST00000383861 LYRM7Q5U5X0 104 aa5.7□□□□□ -1.5
RNU1-28P-201ENST00000383861 TMEM126AQ9H061 195 aa5.7□□□□□ -1.5
RNU1-28P-201ENST00000383861 IGLV5-37A0A075B6J1 123 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 IGKV2-28A0A075B6P5 120 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 IGKV2D-28P01615 120 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 VPREB1P12018 145 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 RPL13AP40429 203 aaKnown RBP5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 Q1RN00 199 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 S100A7L2Q5SY68 101 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 C9orf129Q5T035 196 aaKnown RBP5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 SDIM1Q6ZPB5 146 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 NKAPP1Q8N9T2 125 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 OR13C6PQ8NH95 151 aa5.69□□□□□ -1.5
RNU1-28P-201ENST00000383861 A0A096LNI7 61 aa5.68□□□□□ -1.5
RNU1-28P-201ENST00000383861 COX6CP09669 75 aa5.68□□□□□ -1.5
RNU1-28P-201ENST00000383861 TGP01266 2768 aa5.68□□□□□ -1.5
RNU1-28P-201ENST00000383861 NCR3O14931 201 aa5.67□□□□□ -1.5
RNU1-28P-201ENST00000383861 TSPAN13O95857 204 aa5.67□□□□□ -1.5
RNU1-28P-201ENST00000383861 PSMB2P49721 201 aa5.67□□□□□ -1.5
RNU1-28P-201ENST00000383861 PLECQ15149 4684 aaKnown RBP5.67□□□□□ -1.5
RNU1-28P-201ENST00000383861 LINC00337Q8N6G1 96 aa5.67□□□□□ -1.5
RNU1-28P-201ENST00000383861 TENM2Q9NT68 2774 aa5.67□□□□□ -1.5
RNU1-28P-201ENST00000383861 IGKV2-24A0A0C4DH68 120 aa5.66□□□□□ -1.5
RNU1-28P-201ENST00000383861 H3BUT2 72 aa5.66□□□□□ -1.5
RNU1-28P-201ENST00000383861 H7C2G1 150 aa5.66□□□□□ -1.5
RNU1-28P-201ENST00000383861 IGLV6-57P01721 117 aa5.66□□□□□ -1.5
RNU1-28P-201ENST00000383861 FABP2P12104 132 aa5.66□□□□□ -1.5
RNU1-28P-201ENST00000383861 RPL28P46779 137 aaKnown RBP5.66□□□□□ -1.5
RNU1-28P-201ENST00000383861 PRR3P79522 188 aaKnown RBP5.66□□□□□ -1.5
RNU1-28P-201ENST00000383861 DPH3Q96FX2 82 aa5.66□□□□□ -1.5
RNU1-28P-201ENST00000383861 A0A1W2PPM0 123 aa5.65□□□□□ -1.5
RNU1-28P-201ENST00000383861 SCGB1C2P0DMR2 95 aa5.65□□□□□ -1.5
RNU1-28P-201ENST00000383861 VAMP3Q15836 100 aa5.65□□□□□ -1.5
RNU1-28P-201ENST00000383861 TRBV20-1A0A075B6N2 111 aa5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 H0YGX0 51 aa5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 SERTAD4-AS1Q5TG53 156 aa5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 FAM19A5Q7Z5A7 132 aaPredicted RBP5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 MRPL55Q7Z7F7 128 aaKnown RBP5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 Q8NDZ9 215 aa5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 SMIM11BQ8TCY0 68 aa5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 SPACA4Q8TDM5 124 aa5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 C22orf24Q9Y442 160 aa5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
RNU1-28P-201ENST00000383861 TRBV10-3A0A0K0K1G6 114 aa5.63□□□□□ -1.51
RNU1-28P-201ENST00000383861 SNCGO76070 127 aa5.63□□□□□ -1.51
RNU1-28P-201ENST00000383861 GTF2H5Q6ZYL4 71 aa5.63□□□□□ -1.51
RNU1-28P-201ENST00000383861 ALMS1Q8TCU4 4167 aa5.63□□□□□ -1.51
RNU1-28P-201ENST00000383861 TRAV23DV6A0A075B6W5 121 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 TRBV7-6A0A0J9YX20 115 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 FAM168BA1KXE4 195 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 M0QXV9 152 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 TRIAP1O43715 76 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 KRTAP10-2P60368 255 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 LINC01620Q4KN68 170 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 C7orf33Q8WU49 177 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 KCNQ1DNQ9H478 68 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 DNAH1Q9P2D7 4330 aa5.62□□□□□ -1.51
RNU1-28P-201ENST00000383861 IGLV1-50A0A075B6I6 118 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 GAGE10A6NGK3 116 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 EPM2AB3EWF7 344 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 PRYO14603 147 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 CHTF8P0CG12 524 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 DIRC1Q969H9 104 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 NAA38Q9BRA0 125 aaKnown RBP5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 PLAC8Q9NZF1 115 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 SPCS1Q9Y6A9 102 aa5.61□□□□□ -1.51
RNU1-28P-201ENST00000383861 A0A1B0GV90 55 aa5.6□□□□□ -1.51
RNU1-28P-201ENST00000383861 A0A1B0GX51 115 aa5.6□□□□□ -1.51
RNU1-28P-201ENST00000383861 ZNF73O43830 326 aaPredicted RBP5.6□□□□□ -1.51
RNU1-28P-201ENST00000383861 ATXN8Q156A1 80 aa5.6□□□□□ -1.51
RNU1-28P-201ENST00000383861 C6orf99Q4VX62 202 aa5.6□□□□□ -1.51
RNU1-28P-201ENST00000383861 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
RNU1-28P-201ENST00000383861 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.6□□□□□ -1.51
RNU1-28P-201ENST00000383861 A0A087WYN8 130 aa5.59□□□□□ -1.51
RNU1-28P-201ENST00000383861 K7EP34 96 aa5.59□□□□□ -1.51
RNU1-28P-201ENST00000383861 UBE2BP63146 152 aa5.59□□□□□ -1.51
RNU1-28P-201ENST00000383861 LYSTQ99698 3801 aa5.59□□□□□ -1.51
RNU1-28P-201ENST00000383861 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
RNU1-28P-201ENST00000383861 COX7BP24311 80 aa5.58□□□□□ -1.52
RNU1-28P-201ENST00000383861 FUSP35637 526 aaKnown RBP eCLIP5.58□□□□□ -1.52
RNU1-28P-201ENST00000383861 A0A1B0GVY2 172 aa5.57□□□□□ -1.52
RNU1-28P-201ENST00000383861 PANO1I0J062 215 aa5.57□□□□□ -1.52
RNU1-28P-201ENST00000383861 SLC25A20O43772 301 aa5.57□□□□□ -1.52
RNU1-28P-201ENST00000383861 SPRR1AP35321 89 aa5.57□□□□□ -1.52
RNU1-28P-201ENST00000383861 REG3GQ6UW15 175 aa5.57□□□□□ -1.52
RNU1-28P-201ENST00000383861 Q6ZSA8 131 aa5.57□□□□□ -1.52
RNU1-28P-201ENST00000383861 DNAH6Q9C0G6 4158 aa5.57□□□□□ -1.52
RNU1-28P-201ENST00000383861 ETDCA0A1B0GVM5 59 aa5.56□□□□□ -1.52
RNU1-28P-201ENST00000383861 LST1O00453 97 aa5.56□□□□□ -1.52
RNU1-28P-201ENST00000383861 TCL1BO95988 128 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms