RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 VCX2Q9H322 139 aa7.97□□□□□ -1.13
RPAIN-202ENST00000381208 HBDP02042 147 aa7.96□□□□□ -1.14
RPAIN-202ENST00000381208 DDTP30046 118 aa7.96□□□□□ -1.14
RPAIN-202ENST00000381208 UBE2D1P51668 147 aa7.96□□□□□ -1.14
RPAIN-202ENST00000381208 SEC11AP67812 179 aa7.96□□□□□ -1.14
RPAIN-202ENST00000381208 KIAA0087Q14695 138 aa7.96□□□□□ -1.14
RPAIN-202ENST00000381208 C10orf25Q5T742 122 aa7.96□□□□□ -1.14
RPAIN-202ENST00000381208 C2orf66Q6UXQ4 117 aa7.96□□□□□ -1.14
RPAIN-202ENST00000381208 LRP2P98164 4655 aa7.95□□□□□ -1.14
RPAIN-202ENST00000381208 NDUFC2-KCTD14E9PQ53 114 aa7.95□□□□□ -1.14
RPAIN-202ENST00000381208 SYS1-DBNDD2H3BUS1 97 aa7.95□□□□□ -1.14
RPAIN-202ENST00000381208 IGLV7-43P04211 117 aa7.95□□□□□ -1.14
RPAIN-202ENST00000381208 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
RPAIN-202ENST00000381208 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
RPAIN-202ENST00000381208 LINC00587B1AMM8 73 aa7.94□□□□□ -1.14
RPAIN-202ENST00000381208 PRSS2P07478 247 aa7.94□□□□□ -1.14
RPAIN-202ENST00000381208 AMELXQ99217 191 aa7.94□□□□□ -1.14
RPAIN-202ENST00000381208 PRO1933Q9H354 126 aa7.94□□□□□ -1.14
RPAIN-202ENST00000381208 FAM19A5Q7Z5A7 132 aaPredicted RBP7.93□□□□□ -1.14
RPAIN-202ENST00000381208 FAM19A3Q7Z5A8 133 aa7.93□□□□□ -1.14
RPAIN-202ENST00000381208 M0QXV9 152 aa7.92□□□□□ -1.14
RPAIN-202ENST00000381208 CKS1BP61024 79 aa7.92□□□□□ -1.14
RPAIN-202ENST00000381208 HERVK_113P63121 156 aa7.92□□□□□ -1.14
RPAIN-202ENST00000381208 UBE2BP63146 152 aa7.92□□□□□ -1.14
RPAIN-202ENST00000381208 PAM16Q9Y3D7 125 aa7.92□□□□□ -1.14
RPAIN-202ENST00000381208 FAM168BA1KXE4 195 aa7.91□□□□□ -1.14
RPAIN-202ENST00000381208 LINC01549A6NIU2 74 aa7.91□□□□□ -1.14
RPAIN-202ENST00000381208 IGIPA6NJ69 53 aa7.91□□□□□ -1.14
RPAIN-202ENST00000381208 H0Y9J4 135 aa7.91□□□□□ -1.14
RPAIN-202ENST00000381208 SPATA45Q537H7 98 aa7.91□□□□□ -1.14
RPAIN-202ENST00000381208 C6orf226Q5I0X4 101 aa7.91□□□□□ -1.14
RPAIN-202ENST00000381208 Q8IZM0 81 aa7.91□□□□□ -1.14
RPAIN-202ENST00000381208 TIMM17AQ99595 171 aa7.91□□□□□ -1.14
RPAIN-202ENST00000381208 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
RPAIN-202ENST00000381208 C2orf82Q6UX34 121 aa7.9□□□□□ -1.14
RPAIN-202ENST00000381208 LINC00173Q6ZV60 143 aa7.9□□□□□ -1.14
RPAIN-202ENST00000381208 MIEN1Q9BRT3 115 aa7.9□□□□□ -1.14
RPAIN-202ENST00000381208 KRTAP9-3Q9BYQ3 159 aa7.9□□□□□ -1.14
RPAIN-202ENST00000381208 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
RPAIN-202ENST00000381208 A0A096LNJ9 63 aa7.89□□□□□ -1.15
RPAIN-202ENST00000381208 ATP5LO75964 103 aa7.89□□□□□ -1.15
RPAIN-202ENST00000381208 CXCL5P42830 114 aa7.89□□□□□ -1.15
RPAIN-202ENST00000381208 LBHQ53QV2 105 aaPredicted RBP7.89□□□□□ -1.15
RPAIN-202ENST00000381208 IFI27L1Q96BM0 104 aa7.89□□□□□ -1.15
RPAIN-202ENST00000381208 GEMIN7Q9H840 131 aaKnown RBP7.89□□□□□ -1.15
RPAIN-202ENST00000381208 TOMM7Q9P0U1 55 aa7.89□□□□□ -1.15
RPAIN-202ENST00000381208 UQCR10Q9UDW1 63 aa7.89□□□□□ -1.15
RPAIN-202ENST00000381208 C9orf129Q5T035 196 aaKnown RBP7.87□□□□□ -1.15
RPAIN-202ENST00000381208 TOMM6Q96B49 74 aa7.87□□□□□ -1.15
RPAIN-202ENST00000381208 F8VRH5 84 aa7.86□□□□□ -1.15
RPAIN-202ENST00000381208 RPL13AP40429 203 aaKnown RBP7.86□□□□□ -1.15
RPAIN-202ENST00000381208 ZC2HC1BQ5TFG8 222 aa7.86□□□□□ -1.15
RPAIN-202ENST00000381208 ERASQ7Z444 233 aa7.86□□□□□ -1.15
RPAIN-202ENST00000381208 KRTAP7-1Q8IUC3 87 aa7.86□□□□□ -1.15
RPAIN-202ENST00000381208 C14orf144Q96I85 54 aa7.86□□□□□ -1.15
RPAIN-202ENST00000381208 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
RPAIN-202ENST00000381208 IGLC3P0DOY3 106 aa7.85□□□□□ -1.15
RPAIN-202ENST00000381208 KRTAP11-1Q8IUC1 163 aa7.85□□□□□ -1.15
RPAIN-202ENST00000381208 ATOH7Q8N100 152 aa7.85□□□□□ -1.15
RPAIN-202ENST00000381208 PRR26Q8N8Z3 221 aa7.85□□□□□ -1.15
RPAIN-202ENST00000381208 TP73-AS1Q9UF72 201 aa7.85□□□□□ -1.15
RPAIN-202ENST00000381208 CDKN2A-AS1Q9UH64 79 aa7.85□□□□□ -1.15
RPAIN-202ENST00000381208 ZNF861PO60384 105 aa7.84□□□□□ -1.16
RPAIN-202ENST00000381208 PMCHL2Q9BQD1 86 aa7.84□□□□□ -1.16
RPAIN-202ENST00000381208 C22orf24Q9Y442 160 aa7.84□□□□□ -1.16
RPAIN-202ENST00000381208 TINCRA0A1B0GVN0 87 aa7.83□□□□□ -1.16
RPAIN-202ENST00000381208 M0R143 59 aa7.83□□□□□ -1.16
RPAIN-202ENST00000381208 IGLV5-45A0A087WSX0 123 aa7.82□□□□□ -1.16
RPAIN-202ENST00000381208 TRAV12-1A0A0B4J245 112 aa7.82□□□□□ -1.16
RPAIN-202ENST00000381208 KRTAP1-4P0C5Y4 121 aa7.82□□□□□ -1.16
RPAIN-202ENST00000381208 XAGE1AQ9HD64 81 aa7.82□□□□□ -1.16
RPAIN-202ENST00000381208 SMIM1B2RUZ4 78 aa7.8□□□□□ -1.16
RPAIN-202ENST00000381208 DPM2O94777 84 aa7.8□□□□□ -1.16
RPAIN-202ENST00000381208 PLNP26678 52 aa7.8□□□□□ -1.16
RPAIN-202ENST00000381208 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
RPAIN-202ENST00000381208 MRPL55Q7Z7F7 128 aaKnown RBP7.8□□□□□ -1.16
RPAIN-202ENST00000381208 COX7B2Q8TF08 81 aa7.8□□□□□ -1.16
RPAIN-202ENST00000381208 H3BRM9 83 aa7.79□□□□□ -1.16
RPAIN-202ENST00000381208 IGKCP01834 107 aa7.79□□□□□ -1.16
RPAIN-202ENST00000381208 RPL28P46779 137 aaKnown RBP7.79□□□□□ -1.16
RPAIN-202ENST00000381208 COX8AP10176 69 aa7.78□□□□□ -1.16
RPAIN-202ENST00000381208 PMVKQ15126 192 aa7.78□□□□□ -1.16
RPAIN-202ENST00000381208 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
RPAIN-202ENST00000381208 BCE1O60756 84 aa7.77□□□□□ -1.17
RPAIN-202ENST00000381208 DLEU1O43261 78 aa7.76□□□□□ -1.17
RPAIN-202ENST00000381208 SNHG12Q9BXW3 62 aa7.76□□□□□ -1.17
RPAIN-202ENST00000381208 RNF213Q63HN8 5207 aa7.76□□□□□ -1.17
RPAIN-202ENST00000381208 IGLV5-37A0A075B6J1 123 aa7.75□□□□□ -1.17
RPAIN-202ENST00000381208 TMEM238C9JI98 176 aa7.74□□□□□ -1.17
RPAIN-202ENST00000381208 SPINK8P0C7L1 97 aa7.74□□□□□ -1.17
RPAIN-202ENST00000381208 NKAPP1Q8N9T2 125 aa7.74□□□□□ -1.17
RPAIN-202ENST00000381208 LINC00167Q96N53 147 aa7.74□□□□□ -1.17
RPAIN-202ENST00000381208 SFTA2Q6UW10 78 aa7.73□□□□□ -1.17
RPAIN-202ENST00000381208 BOD1L2Q8IYS8 172 aa7.73□□□□□ -1.17
RPAIN-202ENST00000381208 CRYGAP11844 174 aa7.72□□□□□ -1.17
RPAIN-202ENST00000381208 COL5A1-AS1Q5SY13 56 aa7.72□□□□□ -1.17
RPAIN-202ENST00000381208 NMUP48645 174 aa7.71□□□□□ -1.17
RPAIN-202ENST00000381208 COX17Q14061 63 aa7.71□□□□□ -1.17
RPAIN-202ENST00000381208 IGLV5-39A0A0G2JS06 123 aa7.71□□□□□ -1.18
RPAIN-202ENST00000381208 UBE2AP49459 152 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms