RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 Q6ZRU5 148 aa11.82□□□□□ -0.52
PDX1-201ENST00000381033 CIRBPQ14011 172 aaKnown RBP11.81□□□□□ -0.52
PDX1-201ENST00000381033 LINC00269Q8N2A0 174 aa11.81□□□□□ -0.52
PDX1-201ENST00000381033 COX7B2Q8TF08 81 aa11.81□□□□□ -0.52
PDX1-201ENST00000381033 TIMM17BO60830 172 aa11.81□□□□□ -0.52
PDX1-201ENST00000381033 SPART-AS1P0CW21 52 aa11.8□□□□□ -0.52
PDX1-201ENST00000381033 C2orf82Q6UX34 121 aa11.8□□□□□ -0.52
PDX1-201ENST00000381033 SMCR5Q8TEV8 140 aa11.8□□□□□ -0.52
PDX1-201ENST00000381033 A0A087WZ39 114 aa11.79□□□□□ -0.52
PDX1-201ENST00000381033 SS18Q15532 418 aa11.79□□□□□ -0.52
PDX1-201ENST00000381033 PRR15Q8IV56 129 aa11.79□□□□□ -0.52
PDX1-201ENST00000381033 A0A1B0GUV1 79 aa11.78□□□□□ -0.52
PDX1-201ENST00000381033 ICOSQ9Y6W8 199 aa11.77□□□□□ -0.53
PDX1-201ENST00000381033 ANGP03950 147 aaKnown RBP11.77□□□□□ -0.53
PDX1-201ENST00000381033 CLEC2BQ92478 149 aa11.77□□□□□ -0.53
PDX1-201ENST00000381033 PRB2P02812 416 aaPredicted RBP11.76□□□□□ -0.53
PDX1-201ENST00000381033 MIR7-3HGQ8N6C7 128 aa11.76□□□□□ -0.53
PDX1-201ENST00000381033 DNAH3Q8TD57 4116 aa11.75□□□□□ -0.53
PDX1-201ENST00000381033 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
PDX1-201ENST00000381033 MGAM2Q2M2H8 2515 aa11.73□□□□□ -0.53
PDX1-201ENST00000381033 LINC00158P58513 81 aa11.73□□□□□ -0.53
PDX1-201ENST00000381033 SDIM1Q6ZPB5 146 aa11.73□□□□□ -0.53
PDX1-201ENST00000381033 REG3AQ06141 175 aa11.72□□□□□ -0.53
PDX1-201ENST00000381033 Q6ZTC4 211 aa11.71□□□□□ -0.53
PDX1-201ENST00000381033 CHCHD10Q8WYQ3 142 aaPredicted RBP11.71□□□□□ -0.53
PDX1-201ENST00000381033 EGFEM1PQ0D2K5 195 aa11.7□□□□□ -0.54
PDX1-201ENST00000381033 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
PDX1-201ENST00000381033 LINC00474Q9P2X8 69 aa11.69□□□□□ -0.54
PDX1-201ENST00000381033 RBM12B-AS1Q9P1G2 102 aa11.68□□□□□ -0.54
PDX1-201ENST00000381033 KLK12Q9UKR0 248 aa11.68□□□□□ -0.54
PDX1-201ENST00000381033 IGKV2-28A0A075B6P5 120 aa11.68□□□□□ -0.54
PDX1-201ENST00000381033 IGKV2D-28P01615 120 aa11.68□□□□□ -0.54
PDX1-201ENST00000381033 CCL18P55774 89 aa11.67□□□□□ -0.54
PDX1-201ENST00000381033 LINC00337Q8N6G1 96 aa11.67□□□□□ -0.54
PDX1-201ENST00000381033 LAMTOR3Q9UHA4 124 aa11.67□□□□□ -0.54
PDX1-201ENST00000381033 C9orf116Q5BN46 136 aaPredicted RBP11.67□□□□□ -0.54
PDX1-201ENST00000381033 LYPD5Q6UWN5 251 aa11.67□□□□□ -0.54
PDX1-201ENST00000381033 SND1-IT1Q9HBX3 110 aa11.66□□□□□ -0.54
PDX1-201ENST00000381033 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
PDX1-201ENST00000381033 LELP1Q5T871 98 aa11.66□□□□□ -0.54
PDX1-201ENST00000381033 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
PDX1-201ENST00000381033 NANOS2P60321 138 aaKnown RBP11.65□□□□□ -0.54
PDX1-201ENST00000381033 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
PDX1-201ENST00000381033 KPRPQ5T749 579 aaPredicted RBP11.65□□□□□ -0.54
PDX1-201ENST00000381033 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
PDX1-201ENST00000381033 COX7A2LO14548 114 aa11.64□□□□□ -0.55
PDX1-201ENST00000381033 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
PDX1-201ENST00000381033 TRBV7-6A0A0J9YX20 115 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 IBA57-AS1B1ANH7 110 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 COX6CP09669 75 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 ENHOQ6UWT2 76 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 Q8IZM0 81 aa11.63□□□□□ -0.55
PDX1-201ENST00000381033 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
PDX1-201ENST00000381033 LST1O00453 97 aa11.62□□□□□ -0.55
PDX1-201ENST00000381033 USP17L23D6RBM5 183 aa11.61□□□□□ -0.55
PDX1-201ENST00000381033 FAM218AQ96MZ4 157 aa11.61□□□□□ -0.55
PDX1-201ENST00000381033 C10orf25Q5T742 122 aa11.61□□□□□ -0.55
PDX1-201ENST00000381033 COL7A1Q02388 2944 aa11.61□□□□□ -0.55
PDX1-201ENST00000381033 CCKP06307 115 aa11.59□□□□□ -0.55
PDX1-201ENST00000381033 HUWE1Q7Z6Z7 4374 aaKnown RBP11.59□□□□□ -0.55
PDX1-201ENST00000381033 H7BZZ5 65 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 CRPP02741 224 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 ESRGQ1W209 222 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 PRR34Q9NV39 138 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 LYSTQ99698 3801 aa11.58□□□□□ -0.56
PDX1-201ENST00000381033 UNQ6190/PRO20217Q6UXQ8 127 aa11.57□□□□□ -0.56
PDX1-201ENST00000381033 RBM3P98179 157 aaKnown RBP11.57□□□□□ -0.56
PDX1-201ENST00000381033 Q8NDZ9 215 aa11.56□□□□□ -0.56
PDX1-201ENST00000381033 SMIM11BQ8TCY0 68 aa11.56□□□□□ -0.56
PDX1-201ENST00000381033 C20orf197Q8N268 126 aa11.55□□□□□ -0.56
PDX1-201ENST00000381033 TM2D3Q9BRN9 247 aa11.55□□□□□ -0.56
PDX1-201ENST00000381033 DEFB131BA0A096LNP1 70 aa11.55□□□□□ -0.56
PDX1-201ENST00000381033 TRAV13-2A0A0B4J235 113 aa11.54□□□□□ -0.56
PDX1-201ENST00000381033 Q9HAA7 133 aa11.54□□□□□ -0.56
PDX1-201ENST00000381033 SPAG11BQ08648 103 aa11.53□□□□□ -0.56
PDX1-201ENST00000381033 STAB2Q8WWQ8 2551 aa11.53□□□□□ -0.56
PDX1-201ENST00000381033 PRR26Q8N8Z3 221 aa11.52□□□□□ -0.56
PDX1-201ENST00000381033 VPREB1P12018 145 aa11.52□□□□□ -0.57
PDX1-201ENST00000381033 MPLKIPQ8TAP9 179 aa11.52□□□□□ -0.57
PDX1-201ENST00000381033 RPL28P46779 137 aaKnown RBP11.51□□□□□ -0.57
PDX1-201ENST00000381033 A0A087WVE0 104 aa11.5□□□□□ -0.57
PDX1-201ENST00000381033 A0A087WYN8 130 aa11.5□□□□□ -0.57
PDX1-201ENST00000381033 K7EIL1 84 aa11.5□□□□□ -0.57
PDX1-201ENST00000381033 HIGD2BQ4VC39 106 aa11.5□□□□□ -0.57
PDX1-201ENST00000381033 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
PDX1-201ENST00000381033 C8orf87E5RJ46 101 aa11.48□□□□□ -0.57
PDX1-201ENST00000381033 H3BNG1 76 aa11.48□□□□□ -0.57
PDX1-201ENST00000381033 KTN1-AS1Q86SY8 53 aa11.48□□□□□ -0.57
PDX1-201ENST00000381033 Q6JHZ5 121 aa11.48□□□□□ -0.57
PDX1-201ENST00000381033 C22orf24Q9Y442 160 aa11.47□□□□□ -0.57
PDX1-201ENST00000381033 NCR3O14931 201 aa11.47□□□□□ -0.57
PDX1-201ENST00000381033 GHRHP01286 108 aa11.47□□□□□ -0.57
PDX1-201ENST00000381033 TENM2Q9NT68 2774 aa11.46□□□□□ -0.57
PDX1-201ENST00000381033 IGKV3D-7A0A0C4DH55 119 aa11.46□□□□□ -0.57
PDX1-201ENST00000381033 KRTAP26-1Q6PEX3 210 aa11.46□□□□□ -0.57
PDX1-201ENST00000381033 C6orf48Q9UBA6 75 aa11.45□□□□□ -0.58
PDX1-201ENST00000381033 BAALC-AS2P0C853 105 aa11.44□□□□□ -0.58
PDX1-201ENST00000381033 COX17Q14061 63 aa11.44□□□□□ -0.58
PDX1-201ENST00000381033 XAGE1AQ9HD64 81 aa11.44□□□□□ -0.58
PDX1-201ENST00000381033 SLPIP03973 132 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms