RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 hADV29S1A0JD25 119 aa8.6□□□□□ -1.03
CDX2-201ENST00000381020 ESRGQ1W209 222 aa8.59□□□□□ -1.03
CDX2-201ENST00000381020 C10orf25Q5T742 122 aa8.59□□□□□ -1.03
CDX2-201ENST00000381020 RPL28P46779 137 aaKnown RBP8.59□□□□□ -1.03
CDX2-201ENST00000381020 KRTAP10-11P60412 298 aa8.59□□□□□ -1.03
CDX2-201ENST00000381020 ACYP1P07311 99 aa8.59□□□□□ -1.04
CDX2-201ENST00000381020 TMEM256-PLSCR3K7ERE1 68 aa8.58□□□□□ -1.04
CDX2-201ENST00000381020 COX7BP24311 80 aa8.58□□□□□ -1.04
CDX2-201ENST00000381020 Q6ZQY7 126 aa8.58□□□□□ -1.04
CDX2-201ENST00000381020 COX17Q14061 63 aa8.57□□□□□ -1.04
CDX2-201ENST00000381020 SMIM20Q8N5G0 67 aa8.57□□□□□ -1.04
CDX2-201ENST00000381020 RBM3P98179 157 aaKnown RBP8.57□□□□□ -1.04
CDX2-201ENST00000381020 SDIM1Q6ZPB5 146 aa8.57□□□□□ -1.04
CDX2-201ENST00000381020 TRBV10-3A0A0K0K1G6 114 aa8.56□□□□□ -1.04
CDX2-201ENST00000381020 JMJD7-PLA2G4BH0Y9G9 81 aa8.55□□□□□ -1.04
CDX2-201ENST00000381020 FAM218AQ96MZ4 157 aa8.55□□□□□ -1.04
CDX2-201ENST00000381020 TRAV23DV6A0A075B6W5 121 aa8.55□□□□□ -1.04
CDX2-201ENST00000381020 NBPF19A0A087WUL8 3843 aa8.55□□□□□ -1.04
CDX2-201ENST00000381020 FAM19A5Q7Z5A7 132 aaPredicted RBP8.55□□□□□ -1.04
CDX2-201ENST00000381020 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
CDX2-201ENST00000381020 F8WEM9 126 aa8.54□□□□□ -1.04
CDX2-201ENST00000381020 Q6ZRU5 148 aa8.54□□□□□ -1.04
CDX2-201ENST00000381020 KLK5Q9Y337 293 aaPredicted RBP8.54□□□□□ -1.04
CDX2-201ENST00000381020 M0R2N4 97 aa8.53□□□□□ -1.04
CDX2-201ENST00000381020 ENHOQ6UWT2 76 aa8.53□□□□□ -1.04
CDX2-201ENST00000381020 NDUFV3P56181 108 aaKnown RBP8.53□□□□□ -1.04
CDX2-201ENST00000381020 LINC00612Q8N6U2 182 aa8.53□□□□□ -1.04
CDX2-201ENST00000381020 OTOGQ6ZRI0 2925 aa8.52□□□□□ -1.04
CDX2-201ENST00000381020 CDIP1Q9H305 208 aa8.52□□□□□ -1.05
CDX2-201ENST00000381020 LINC00643Q86TS7 51 aa8.52□□□□□ -1.05
CDX2-201ENST00000381020 ZNF73O43830 326 aaPredicted RBP8.51□□□□□ -1.05
CDX2-201ENST00000381020 A0A1B0GX51 115 aa8.51□□□□□ -1.05
CDX2-201ENST00000381020 USP17L23D6RBM5 183 aa8.5□□□□□ -1.05
CDX2-201ENST00000381020 EGFEM1PQ0D2K5 195 aa8.5□□□□□ -1.05
CDX2-201ENST00000381020 TENM1Q9UKZ4 2725 aa8.5□□□□□ -1.05
CDX2-201ENST00000381020 SCXQ7RTU7 201 aa8.5□□□□□ -1.05
CDX2-201ENST00000381020 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
CDX2-201ENST00000381020 Q8N814 137 aa8.49□□□□□ -1.05
CDX2-201ENST00000381020 C6orf48Q9UBA6 75 aa8.49□□□□□ -1.05
CDX2-201ENST00000381020 KMT2BQ9UMN6 2715 aaPredicted RBP8.49□□□□□ -1.05
CDX2-201ENST00000381020 M0R378 163 aa8.49□□□□□ -1.05
CDX2-201ENST00000381020 VWFP04275 2813 aa8.49□□□□□ -1.05
CDX2-201ENST00000381020 FAM19A3Q7Z5A8 133 aa8.48□□□□□ -1.05
CDX2-201ENST00000381020 NDUFC2-KCTD14E9PQ53 114 aa8.47□□□□□ -1.05
CDX2-201ENST00000381020 VPS13CQ709C8 3753 aa8.47□□□□□ -1.05
CDX2-201ENST00000381020 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
CDX2-201ENST00000381020 NDUFC2O95298 119 aa8.47□□□□□ -1.05
CDX2-201ENST00000381020 PDZD2O15018 2839 aa8.46□□□□□ -1.05
CDX2-201ENST00000381020 A0A096LNI7 61 aa8.45□□□□□ -1.06
CDX2-201ENST00000381020 LINC01556Q5JQF7 62 aa8.45□□□□□ -1.06
CDX2-201ENST00000381020 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
CDX2-201ENST00000381020 CCDC179H3BU77 68 aa8.44□□□□□ -1.06
CDX2-201ENST00000381020 A0A087WVE0 104 aa8.43□□□□□ -1.06
CDX2-201ENST00000381020 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDX2-201ENST00000381020 NREPQ16612 68 aa8.43□□□□□ -1.06
CDX2-201ENST00000381020 FAM19A1Q7Z5A9 133 aa8.43□□□□□ -1.06
CDX2-201ENST00000381020 K7EIL1 84 aa8.42□□□□□ -1.06
CDX2-201ENST00000381020 LINC00588Q9Y4M8 146 aa8.42□□□□□ -1.06
CDX2-201ENST00000381020 ZFHX3Q15911 3703 aa8.42□□□□□ -1.06
CDX2-201ENST00000381020 MUC7Q8TAX7 377 aa8.42□□□□□ -1.06
CDX2-201ENST00000381020 STAB2Q8WWQ8 2551 aa8.41□□□□□ -1.06
CDX2-201ENST00000381020 H3BNG1 76 aa8.41□□□□□ -1.06
CDX2-201ENST00000381020 CCKP06307 115 aa8.41□□□□□ -1.06
CDX2-201ENST00000381020 UBE2AP49459 152 aa8.41□□□□□ -1.06
CDX2-201ENST00000381020 C3orf84H3BNL1 204 aa8.41□□□□□ -1.06
CDX2-201ENST00000381020 LINC00575Q6W349 94 aa8.41□□□□□ -1.06
CDX2-201ENST00000381020 C2orf48Q96LS8 159 aa8.4□□□□□ -1.06
CDX2-201ENST00000381020 FAM240AA0A1B0GVK7 77 aa8.4□□□□□ -1.07
CDX2-201ENST00000381020 PRR34Q9NV39 138 aa8.4□□□□□ -1.07
CDX2-201ENST00000381020 M0QXV9 152 aa8.39□□□□□ -1.07
CDX2-201ENST00000381020 ATOX1O00244 68 aa8.39□□□□□ -1.07
CDX2-201ENST00000381020 LINC00846Q9NV44 126 aa8.39□□□□□ -1.07
CDX2-201ENST00000381020 LOC107984640A0A0U1RRK4 108 aa8.39□□□□□ -1.07
CDX2-201ENST00000381020 UPK3BQ9BT76 320 aa8.39□□□□□ -1.07
CDX2-201ENST00000381020 PPDPFQ9H3Y8 114 aa8.39□□□□□ -1.07
CDX2-201ENST00000381020 FBN1P35555 2871 aaKnown RBP8.38□□□□□ -1.07
CDX2-201ENST00000381020 C14orf177Q52M58 125 aa8.37□□□□□ -1.07
CDX2-201ENST00000381020 PDE6GP18545 87 aa8.37□□□□□ -1.07
CDX2-201ENST00000381020 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.37□□□□□ -1.07
CDX2-201ENST00000381020 H3BQ85 93 aa8.36□□□□□ -1.07
CDX2-201ENST00000381020 Q6ZRP5 223 aa8.36□□□□□ -1.07
CDX2-201ENST00000381020 C20orf197Q8N268 126 aa8.35□□□□□ -1.07
CDX2-201ENST00000381020 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
CDX2-201ENST00000381020 LY6G6CO95867 125 aa8.33□□□□□ -1.08
CDX2-201ENST00000381020 BPY2O14599 106 aa8.32□□□□□ -1.08
CDX2-201ENST00000381020 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
CDX2-201ENST00000381020 C22orf24Q9Y442 160 aa8.32□□□□□ -1.08
CDX2-201ENST00000381020 DNAH10OSP0CZ25 163 aa8.32□□□□□ -1.08
CDX2-201ENST00000381020 C9orf129Q5T035 196 aaKnown RBP8.31□□□□□ -1.08
CDX2-201ENST00000381020 MDFIQ99750 246 aa8.31□□□□□ -1.08
CDX2-201ENST00000381020 CASC10Q5T4H9 136 aa8.31□□□□□ -1.08
CDX2-201ENST00000381020 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
CDX2-201ENST00000381020 WIPF1O43516 503 aa8.31□□□□□ -1.08
CDX2-201ENST00000381020 FAM168BA1KXE4 195 aa8.3□□□□□ -1.08
CDX2-201ENST00000381020 C3orf22Q8N5N4 141 aa8.3□□□□□ -1.08
CDX2-201ENST00000381020 IMUPQ9GZP8 106 aa8.3□□□□□ -1.08
CDX2-201ENST00000381020 DHRS4-AS1Q9P1J3 65 aa8.3□□□□□ -1.08
CDX2-201ENST00000381020 VPREB1P12018 145 aa8.3□□□□□ -1.08
CDX2-201ENST00000381020 LINC00167Q96N53 147 aa8.3□□□□□ -1.08
CDX2-201ENST00000381020 NUPR2A6NF83 97 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms