RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ACACBO00763 2458 aa7.55□□□□□ -1.2
CLCN4-202ENST00000380833 ATG2AQ2TAZ0 1938 aa7.55□□□□□ -1.2
CLCN4-202ENST00000380833 Q8N2B8 174 aa7.55□□□□□ -1.2
CLCN4-202ENST00000380833 PCNX3Q9H6A9 2034 aa7.55□□□□□ -1.2
CLCN4-202ENST00000380833 ALPK3Q96L96 1907 aa7.55□□□□□ -1.2
CLCN4-202ENST00000380833 COX8CQ7Z4L0 72 aa7.54□□□□□ -1.2
CLCN4-202ENST00000380833 LTBP2Q14767 1821 aa7.54□□□□□ -1.2
CLCN4-202ENST00000380833 C16orf90A8MZG2 172 aa7.54□□□□□ -1.2
CLCN4-202ENST00000380833 Q6ZRU5 148 aa7.54□□□□□ -1.2
CLCN4-202ENST00000380833 CEP192Q8TEP8 1941 aa7.54□□□□□ -1.2
CLCN4-202ENST00000380833 IGLV1-40P01703 118 aa7.53□□□□□ -1.2
CLCN4-202ENST00000380833 EGFEM1PQ0D2K5 195 aa7.53□□□□□ -1.2
CLCN4-202ENST00000380833 KIAA1549LQ6ZVL6 1849 aa7.52□□□□□ -1.21
CLCN4-202ENST00000380833 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
CLCN4-202ENST00000380833 MOBPQ13875 183 aa7.52□□□□□ -1.21
CLCN4-202ENST00000380833 Q6ZSN1 163 aa7.51□□□□□ -1.21
CLCN4-202ENST00000380833 KIF25-AS1Q9Y6Z4 181 aa7.51□□□□□ -1.21
CLCN4-202ENST00000380833 LYPD5Q6UWN5 251 aa7.51□□□□□ -1.21
CLCN4-202ENST00000380833 EML5Q05BV3 1969 aa7.5□□□□□ -1.21
CLCN4-202ENST00000380833 COL5A1P20908 1838 aaPredicted RBP7.5□□□□□ -1.21
CLCN4-202ENST00000380833 COX6B2Q6YFQ2 88 aa7.5□□□□□ -1.21
CLCN4-202ENST00000380833 CACNA1AO00555 2505 aa7.49□□□□□ -1.21
CLCN4-202ENST00000380833 MYO18BQ8IUG5 2567 aa7.49□□□□□ -1.21
CLCN4-202ENST00000380833 IGLV5-39A0A0G2JS06 123 aa7.49□□□□□ -1.21
CLCN4-202ENST00000380833 IGLV1-51P01701 117 aa7.48□□□□□ -1.21
CLCN4-202ENST00000380833 KIAA0087Q14695 138 aa7.48□□□□□ -1.21
CLCN4-202ENST00000380833 A0A1W2PPR1 153 aa7.48□□□□□ -1.21
CLCN4-202ENST00000380833 AGRNO00468 2067 aa7.48□□□□□ -1.21
CLCN4-202ENST00000380833 TTC28Q96AY4 2481 aa7.47□□□□□ -1.21
CLCN4-202ENST00000380833 A0A0A0MQY5 61 aa7.47□□□□□ -1.21
CLCN4-202ENST00000380833 LUZP6Q538Z0 58 aa7.47□□□□□ -1.21
CLCN4-202ENST00000380833 C22orf24Q9Y442 160 aa7.46□□□□□ -1.22
CLCN4-202ENST00000380833 PHF5AQ7RTV0 110 aaKnown RBP7.46□□□□□ -1.22
CLCN4-202ENST00000380833 PIEZO2Q9H5I5 2752 aa7.44□□□□□ -1.22
CLCN4-202ENST00000380833 Q75L30 129 aa7.44□□□□□ -1.22
CLCN4-202ENST00000380833 TYMSOSQ8TAI1 123 aa7.43□□□□□ -1.22
CLCN4-202ENST00000380833 SPANXA2-OT1Q8N9U9 137 aa7.43□□□□□ -1.22
CLCN4-202ENST00000380833 LINC00313P59037 77 aa7.42□□□□□ -1.22
CLCN4-202ENST00000380833 Q8NBF4 154 aa7.42□□□□□ -1.22
CLCN4-202ENST00000380833 ANKHD1Q8IWZ3 2542 aaKnown RBP7.42□□□□□ -1.22
CLCN4-202ENST00000380833 SMR3BP02814 79 aaPredicted RBP7.42□□□□□ -1.22
CLCN4-202ENST00000380833 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
CLCN4-202ENST00000380833 RTL8CO15255 209 aa7.41□□□□□ -1.22
CLCN4-202ENST00000380833 Q96NJ1 140 aa7.4□□□□□ -1.22
CLCN4-202ENST00000380833 PRAC1Q96KF2 57 aa7.4□□□□□ -1.23
CLCN4-202ENST00000380833 PIEZO1Q92508 2521 aa7.39□□□□□ -1.23
CLCN4-202ENST00000380833 FP248Q71RG6 208 aaPredicted RBP7.39□□□□□ -1.23
CLCN4-202ENST00000380833 LINC00588Q9Y4M8 146 aa7.39□□□□□ -1.23
CLCN4-202ENST00000380833 C9orf92A6NGG3 77 aa7.39□□□□□ -1.23
CLCN4-202ENST00000380833 LINC00315P59091 139 aa7.39□□□□□ -1.23
CLCN4-202ENST00000380833 KRTAP24-1Q3LI83 254 aa7.39□□□□□ -1.23
CLCN4-202ENST00000380833 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
CLCN4-202ENST00000380833 EPM2AB3EWF7 344 aa7.38□□□□□ -1.23
CLCN4-202ENST00000380833 IGLV5-45A0A087WSX0 123 aa7.38□□□□□ -1.23
CLCN4-202ENST00000380833 KRTAP16-1A8MUX0 517 aa7.38□□□□□ -1.23
CLCN4-202ENST00000380833 NAV2Q8IVL1 2488 aa7.37□□□□□ -1.23
CLCN4-202ENST00000380833 K7EQZ3 153 aa7.37□□□□□ -1.23
CLCN4-202ENST00000380833 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
CLCN4-202ENST00000380833 A8MWP4 228 aa7.37□□□□□ -1.23
CLCN4-202ENST00000380833 LITAFQ99732 161 aa7.36□□□□□ -1.23
CLCN4-202ENST00000380833 JMJD1CQ15652 2540 aa7.35□□□□□ -1.23
CLCN4-202ENST00000380833 NCOR2Q9Y618 2525 aa7.34□□□□□ -1.23
CLCN4-202ENST00000380833 LINC00167Q96N53 147 aa7.34□□□□□ -1.23
CLCN4-202ENST00000380833 A0A1B0GUV1 79 aa7.34□□□□□ -1.23
CLCN4-202ENST00000380833 IGF2RP11717 2491 aa7.34□□□□□ -1.23
CLCN4-202ENST00000380833 DMAC1Q96GE9 116 aa7.34□□□□□ -1.24
CLCN4-202ENST00000380833 C2CD3Q4AC94 2353 aa7.33□□□□□ -1.24
CLCN4-202ENST00000380833 FAM229BQ4G0N7 80 aa7.33□□□□□ -1.24
CLCN4-202ENST00000380833 LINC00476Q8WZB0 136 aa7.32□□□□□ -1.24
CLCN4-202ENST00000380833 APLNQ9ULZ1 77 aa7.32□□□□□ -1.24
CLCN4-202ENST00000380833 ADAMTS20P59510 1910 aa7.31□□□□□ -1.24
CLCN4-202ENST00000380833 CSAG1Q6PB30 78 aa7.31□□□□□ -1.24
CLCN4-202ENST00000380833 ST20-AS1Q8NBB2 130 aa7.31□□□□□ -1.24
CLCN4-202ENST00000380833 TLN1Q9Y490 2541 aaKnown RBP7.29□□□□□ -1.24
CLCN4-202ENST00000380833 LRRK2Q5S007 2527 aa7.29□□□□□ -1.24
CLCN4-202ENST00000380833 Q6ZRP5 223 aa7.29□□□□□ -1.24
CLCN4-202ENST00000380833 DNAH10OSP0CZ25 163 aa7.29□□□□□ -1.24
CLCN4-202ENST00000380833 EP400Q96L91 3159 aa7.29□□□□□ -1.24
CLCN4-202ENST00000380833 FAM168BA1KXE4 195 aa7.29□□□□□ -1.24
CLCN4-202ENST00000380833 C9orf129Q5T035 196 aaKnown RBP7.28□□□□□ -1.24
CLCN4-202ENST00000380833 NBDYA0A0U1RRE5 68 aa7.27□□□□□ -1.25
CLCN4-202ENST00000380833 IGHV3OR16-9A0A0B4J2B5 98 aa7.27□□□□□ -1.25
CLCN4-202ENST00000380833 Q5VV11 94 aa7.26□□□□□ -1.25
CLCN4-202ENST00000380833 WWC2-AS2Q96NR7 200 aa7.26□□□□□ -1.25
CLCN4-202ENST00000380833 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
CLCN4-202ENST00000380833 LRP4O75096 1905 aa7.26□□□□□ -1.25
CLCN4-202ENST00000380833 IGLV6-57P01721 117 aa7.26□□□□□ -1.25
CLCN4-202ENST00000380833 PTPRSQ13332 1948 aa7.26□□□□□ -1.25
CLCN4-202ENST00000380833 MYO9AB2RTY4 2548 aa7.25□□□□□ -1.25
CLCN4-202ENST00000380833 ZFYVE26Q68DK2 2539 aa7.25□□□□□ -1.25
CLCN4-202ENST00000380833 PRR26Q8N8Z3 221 aa7.24□□□□□ -1.25
CLCN4-202ENST00000380833 OXTP01178 125 aa7.24□□□□□ -1.25
CLCN4-202ENST00000380833 Q6ZRX8 168 aa7.23□□□□□ -1.25
CLCN4-202ENST00000380833 ANAPC11Q9NYG5 84 aa7.23□□□□□ -1.25
CLCN4-202ENST00000380833 LINC01558Q9Y6Z2 57 aa7.23□□□□□ -1.25
CLCN4-202ENST00000380833 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
CLCN4-202ENST00000380833 Q8N9P0 234 aaPredicted RBP7.22□□□□□ -1.25
CLCN4-202ENST00000380833 OCR1Q9BZK8 76 aa7.22□□□□□ -1.25
CLCN4-202ENST00000380833 DSCR10P59022 87 aa7.21□□□□□ -1.25
CLCN4-202ENST00000380833 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms