RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 C18orf32Q8TCD1 76 aa9.77□□□□□ -0.85
SMN2-201ENST00000380741 RPS10P5Q9NQ39 176 aa9.77□□□□□ -0.85
SMN2-201ENST00000380741 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
SMN2-201ENST00000380741 LINC00614P0C842 121 aa9.76□□□□□ -0.85
SMN2-201ENST00000380741 RHEBQ15382 184 aa9.76□□□□□ -0.85
SMN2-201ENST00000380741 C10orf91Q5T1B1 145 aa9.76□□□□□ -0.85
SMN2-201ENST00000380741 COMMD7Q86VX2 200 aa9.76□□□□□ -0.85
SMN2-201ENST00000380741 TMEM170BQ5T4T1 132 aa9.74□□□□□ -0.85
SMN2-201ENST00000380741 BAGE3Q86Y29 109 aa9.74□□□□□ -0.85
SMN2-201ENST00000380741 PLEKHB2Q96CS7 222 aa9.74□□□□□ -0.85
SMN2-201ENST00000380741 TRAPPC1Q9Y5R8 145 aa9.74□□□□□ -0.85
SMN2-201ENST00000380741 SFTA2Q6UW10 78 aa9.73□□□□□ -0.85
SMN2-201ENST00000380741 CBLN2Q8IUK8 224 aa9.73□□□□□ -0.85
SMN2-201ENST00000380741 C3orf22Q8N5N4 141 aa9.72□□□□□ -0.85
SMN2-201ENST00000380741 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
SMN2-201ENST00000380741 TPRXLQ17RH7 258 aa9.71□□□□□ -0.86
SMN2-201ENST00000380741 CDIP1Q9H305 208 aa9.71□□□□□ -0.86
SMN2-201ENST00000380741 IGLV7-46A0A075B6I9 117 aa9.7□□□□□ -0.86
SMN2-201ENST00000380741 LINC00158P58513 81 aa9.7□□□□□ -0.86
SMN2-201ENST00000380741 A0A0U1RRA0 63 aa9.69□□□□□ -0.86
SMN2-201ENST00000380741 CTAG1AP78358 180 aa9.69□□□□□ -0.86
SMN2-201ENST00000380741 LCE2AQ5TA79 106 aaPredicted RBP9.69□□□□□ -0.86
SMN2-201ENST00000380741 CHTOPQ9Y3Y2 248 aaKnown RBP9.69□□□□□ -0.86
SMN2-201ENST00000380741 SPRR4Q96PI1 79 aa9.67□□□□□ -0.86
SMN2-201ENST00000380741 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
SMN2-201ENST00000380741 SMIM13P0DJ93 91 aa9.64□□□□□ -0.87
SMN2-201ENST00000380741 KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
SMN2-201ENST00000380741 PPDPFQ9H3Y8 114 aa9.64□□□□□ -0.87
SMN2-201ENST00000380741 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
SMN2-201ENST00000380741 PRYO14603 147 aa9.63□□□□□ -0.87
SMN2-201ENST00000380741 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
SMN2-201ENST00000380741 SPAG11AQ6PDA7 123 aa9.63□□□□□ -0.87
SMN2-201ENST00000380741 BOD1L2Q8IYS8 172 aa9.63□□□□□ -0.87
SMN2-201ENST00000380741 APOC3P02656 99 aa9.62□□□□□ -0.87
SMN2-201ENST00000380741 IFI27L1Q96BM0 104 aa9.62□□□□□ -0.87
SMN2-201ENST00000380741 ZNF706Q9Y5V0 76 aaPredicted RBP9.62□□□□□ -0.87
SMN2-201ENST00000380741 NCR3O14931 201 aa9.61□□□□□ -0.87
SMN2-201ENST00000380741 ATP6V1G1O75348 118 aa9.61□□□□□ -0.87
SMN2-201ENST00000380741 MEIG1Q5JSS6 88 aa9.61□□□□□ -0.87
SMN2-201ENST00000380741 MIR7-3HGQ8N6C7 128 aa9.61□□□□□ -0.87
SMN2-201ENST00000380741 SPRR1AP35321 89 aa9.6□□□□□ -0.87
SMN2-201ENST00000380741 LINC00337Q8N6G1 96 aa9.6□□□□□ -0.87
SMN2-201ENST00000380741 CHCHD1Q96BP2 118 aaKnown RBP9.6□□□□□ -0.87
SMN2-201ENST00000380741 DAND5Q8N907 189 aa9.59□□□□□ -0.87
SMN2-201ENST00000380741 KCNQ1DNQ9H478 68 aa9.59□□□□□ -0.87
SMN2-201ENST00000380741 KRTAP4-16G5E9R7 235 aaPredicted RBP9.58□□□□□ -0.88
SMN2-201ENST00000380741 SNAPINO95295 136 aa9.58□□□□□ -0.88
SMN2-201ENST00000380741 HERV-K104P63124 156 aa9.58□□□□□ -0.88
SMN2-201ENST00000380741 FP248Q71RG6 208 aaPredicted RBP9.58□□□□□ -0.88
SMN2-201ENST00000380741 Q8NBF4 154 aa9.58□□□□□ -0.88
SMN2-201ENST00000380741 SMCR5Q8TEV8 140 aa9.58□□□□□ -0.88
SMN2-201ENST00000380741 TRBV10-3A0A0K0K1G6 114 aa9.57□□□□□ -0.88
SMN2-201ENST00000380741 SVBPQ8N300 66 aa9.57□□□□□ -0.88
SMN2-201ENST00000380741 YPEL4Q96NS1 127 aa9.57□□□□□ -0.88
SMN2-201ENST00000380741 NDUFA12Q9UI09 145 aa9.57□□□□□ -0.88
SMN2-201ENST00000380741 ETDCA0A1B0GVM5 59 aa9.56□□□□□ -0.88
SMN2-201ENST00000380741 NDUFA5Q16718 116 aa9.55□□□□□ -0.88
SMN2-201ENST00000380741 LINC00587B1AMM8 73 aa9.54□□□□□ -0.88
SMN2-201ENST00000380741 LINC00483Q53H64 154 aa9.54□□□□□ -0.88
SMN2-201ENST00000380741 FAM19A2Q8N3H0 131 aa9.54□□□□□ -0.88
SMN2-201ENST00000380741 MYMXA0A1B0GTQ4 84 aa9.53□□□□□ -0.88
SMN2-201ENST00000380741 HSBP1O75506 76 aa9.53□□□□□ -0.88
SMN2-201ENST00000380741 KRTAP13-3Q3SY46 172 aa9.53□□□□□ -0.88
SMN2-201ENST00000380741 H0Y8G0 127 aa9.52□□□□□ -0.89
SMN2-201ENST00000380741 SPINK1P00995 79 aa9.52□□□□□ -0.89
SMN2-201ENST00000380741 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.89
SMN2-201ENST00000380741 MAP1LC3CQ9BXW4 147 aa9.52□□□□□ -0.89
SMN2-201ENST00000380741 B5MCH6 92 aa9.51□□□□□ -0.89
SMN2-201ENST00000380741 GAGE2AQ6NT46 116 aa9.51□□□□□ -0.89
SMN2-201ENST00000380741 ERC2-IT1O76042 136 aa9.5□□□□□ -0.89
SMN2-201ENST00000380741 S100A12P80511 92 aa9.5□□□□□ -0.89
SMN2-201ENST00000380741 IGLV9-49A0A0B4J1Y8 123 aa9.48□□□□□ -0.89
SMN2-201ENST00000380741 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
SMN2-201ENST00000380741 LEPROTO15243 131 aa9.48□□□□□ -0.89
SMN2-201ENST00000380741 DDTP30046 118 aa9.48□□□□□ -0.89
SMN2-201ENST00000380741 MOBPQ13875 183 aa9.48□□□□□ -0.89
SMN2-201ENST00000380741 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
SMN2-201ENST00000380741 Q9BRP9 147 aa9.48□□□□□ -0.89
SMN2-201ENST00000380741 TRBV10-2A0A0K0K1G8 114 aa9.47□□□□□ -0.89
SMN2-201ENST00000380741 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
SMN2-201ENST00000380741 LEPROTL1O95214 131 aa9.46□□□□□ -0.9
SMN2-201ENST00000380741 J3QQQ9 107 aa9.45□□□□□ -0.9
SMN2-201ENST00000380741 PLNP26678 52 aa9.45□□□□□ -0.9
SMN2-201ENST00000380741 LINC00310P59036 64 aa9.45□□□□□ -0.9
SMN2-201ENST00000380741 Q6ZRX8 168 aa9.45□□□□□ -0.9
SMN2-201ENST00000380741 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
SMN2-201ENST00000380741 SERF1AO75920 110 aa9.44□□□□□ -0.9
SMN2-201ENST00000380741 TRGC2P03986 189 aa9.44□□□□□ -0.9
SMN2-201ENST00000380741 RPS29P62273 56 aaKnown RBP9.44□□□□□ -0.9
SMN2-201ENST00000380741 SSBP3-AS1Q7Z2R9 100 aa9.44□□□□□ -0.9
SMN2-201ENST00000380741 Q8N377 158 aa9.44□□□□□ -0.9
SMN2-201ENST00000380741 LORP23490 312 aaPredicted RBP9.43□□□□□ -0.9
SMN2-201ENST00000380741 MIEN1Q9BRT3 115 aa9.43□□□□□ -0.9
SMN2-201ENST00000380741 IGLV6-57P01721 117 aa9.42□□□□□ -0.9
SMN2-201ENST00000380741 NMUP48645 174 aa9.42□□□□□ -0.9
SMN2-201ENST00000380741 PMCHL2Q9BQD1 86 aa9.42□□□□□ -0.9
SMN2-201ENST00000380741 KRTAP4-1Q9BYQ7 146 aa9.42□□□□□ -0.9
SMN2-201ENST00000380741 DPM2O94777 84 aa9.41□□□□□ -0.9
SMN2-201ENST00000380741 NDUFC2O95298 119 aa9.41□□□□□ -0.9
SMN2-201ENST00000380741 LGALS3P17931 250 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms